BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0572500 Os10g0572500|AK067954
         (719 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0572500  Zinc finger, FYVE/PHD-type domain containing p...  1376   0.0  
Os11g0292000  Zinc finger, FYVE/PHD-type domain containing p...    86   8e-17

>Os10g0572500 Zinc finger, FYVE/PHD-type domain containing protein
          Length = 719

 Score = 1376 bits (3562), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 680/719 (94%), Positives = 680/719 (94%)

Query: 1   MRAPQERTVRDLYDRTRHKDLALXXXXXXXXXXXXXXXXXXHREVVAKMEDKLTARKRPV 60
           MRAPQERTVRDLYDRTRHKDLAL                  HREVVAKMEDKLTARKRPV
Sbjct: 1   MRAPQERTVRDLYDRTRHKDLALPEESVEGRGSGRRVEGPGHREVVAKMEDKLTARKRPV 60

Query: 61  PLDSPNVKTESGTCNVCCAPCSSCLHRNIALTDSNMDCGSSQTCFARSETKNSSFVRVDK 120
           PLDSPNVKTESGTCNVCCAPCSSCLHRNIALTDSNMDCGSSQTCFARSETKNSSFVRVDK
Sbjct: 61  PLDSPNVKTESGTCNVCCAPCSSCLHRNIALTDSNMDCGSSQTCFARSETKNSSFVRVDK 120

Query: 121 GLRTKAKGGENDDEFSATSSPASYSENGENKVIARSSVAADSEVDKPAKRRRLVNHGSRS 180
           GLRTKAKGGENDDEFSATSSPASYSENGENKVIARSSVAADSEVDKPAKRRRLVNHGSRS
Sbjct: 121 GLRTKAKGGENDDEFSATSSPASYSENGENKVIARSSVAADSEVDKPAKRRRLVNHGSRS 180

Query: 181 PIVECHDDSNSCVTGVXXXXXXXXXXXXXXXXXXXXXRDLTVNYKDNGINRLRNYCAEES 240
           PIVECHDDSNSCVTGV                     RDLTVNYKDNGINRLRNYCAEES
Sbjct: 181 PIVECHDDSNSCVTGVSAASKLLLDKKKDKLSTSASSRDLTVNYKDNGINRLRNYCAEES 240

Query: 241 TGKKRSDVHAMHRSSSDRSLPAESPFATKRLLRTQSSLSASHGLSPKRPTHEFGNAQNNL 300
           TGKKRSDVHAMHRSSSDRSLPAESPFATKRLLRTQSSLSASHGLSPKRPTHEFGNAQNNL
Sbjct: 241 TGKKRSDVHAMHRSSSDRSLPAESPFATKRLLRTQSSLSASHGLSPKRPTHEFGNAQNNL 300

Query: 301 AHQPCEKASSNKTVERSLGGKSDPSVLGGERHSMMTSCGTSNRDKIKAGSLTKNLENGTS 360
           AHQPCEKASSNKTVERSLGGKSDPSVLGGERHSMMTSCGTSNRDKIKAGSLTKNLENGTS
Sbjct: 301 AHQPCEKASSNKTVERSLGGKSDPSVLGGERHSMMTSCGTSNRDKIKAGSLTKNLENGTS 360

Query: 361 CSRNGSLEHADIQSNDAVNRNDNDKQERNQGCSMDTGSGRKLNTQNDVMTDSGNSEGLID 420
           CSRNGSLEHADIQSNDAVNRNDNDKQERNQGCSMDTGSGRKLNTQNDVMTDSGNSEGLID
Sbjct: 361 CSRNGSLEHADIQSNDAVNRNDNDKQERNQGCSMDTGSGRKLNTQNDVMTDSGNSEGLID 420

Query: 421 VNVCDICGDVGREYLLATCTRCLEGAEHTYCMRVKLEKVPDGEWLCEECCLKEDENQTRS 480
           VNVCDICGDVGREYLLATCTRCLEGAEHTYCMRVKLEKVPDGEWLCEECCLKEDENQTRS
Sbjct: 421 VNVCDICGDVGREYLLATCTRCLEGAEHTYCMRVKLEKVPDGEWLCEECCLKEDENQTRS 480

Query: 481 NGGTSRNKVLDGKNQNSESTNNSKTLKVVVTDLDSQQITCGTPVNDPLAGSNQKLHLASS 540
           NGGTSRNKVLDGKNQNSESTNNSKTLKVVVTDLDSQQITCGTPVNDPLAGSNQKLHLASS
Sbjct: 481 NGGTSRNKVLDGKNQNSESTNNSKTLKVVVTDLDSQQITCGTPVNDPLAGSNQKLHLASS 540

Query: 541 DLEARQVKCATPTAERLDVKNKNSGIMGNRKKLQVVTSSLEARQSSCRTPTSGSLDKKNQ 600
           DLEARQVKCATPTAERLDVKNKNSGIMGNRKKLQVVTSSLEARQSSCRTPTSGSLDKKNQ
Sbjct: 541 DLEARQVKCATPTAERLDVKNKNSGIMGNRKKLQVVTSSLEARQSSCRTPTSGSLDKKNQ 600

Query: 601 SLDKRSQSSEVLLKRKKLRVATDMESPLSNDGVRSPPKSCKRYAENTLSSTPRLLKADSP 660
           SLDKRSQSSEVLLKRKKLRVATDMESPLSNDGVRSPPKSCKRYAENTLSSTPRLLKADSP
Sbjct: 601 SLDKRSQSSEVLLKRKKLRVATDMESPLSNDGVRSPPKSCKRYAENTLSSTPRLLKADSP 660

Query: 661 RNHDVFSRENSFKSSNKGSIKSPDNAPMRSQAVNSSVTLPRSYSLGNLANVKTPGPSPR 719
           RNHDVFSRENSFKSSNKGSIKSPDNAPMRSQAVNSSVTLPRSYSLGNLANVKTPGPSPR
Sbjct: 661 RNHDVFSRENSFKSSNKGSIKSPDNAPMRSQAVNSSVTLPRSYSLGNLANVKTPGPSPR 719



>Os11g0292000 Zinc finger, FYVE/PHD-type domain containing protein
          Length = 928

 Score = 86.3 bits (212), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 32/49 (65%), Positives = 39/49 (79%)

Query: 421 VNVCDICGDVGREYLLATCTRCLEGAEHTYCMRVKLEKVPDGEWLCEEC 469
           V +CDICGDVG E  LA C+RC +GAEH YCMRV + +VP+G+W CEEC
Sbjct: 32  VKICDICGDVGEEKKLAICSRCNDGAEHIYCMRVMMPEVPEGDWFCEEC 80




 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 35/63 (55%), Positives = 45/63 (71%), Gaps = 1/63 (1%)

Query: 419 IDVNVCDICGDVGREYLLATCTRCLEGAEHTYCMRVKLEKVPDGEWLCEECCLKEDENQT 478
           + V VCDICGD+G E  LA C+RC +GAEH YCMRV +++VP  +WLC E C  E E++ 
Sbjct: 98  VKVKVCDICGDIGAEEKLAVCSRCNDGAEHIYCMRVMMQEVPKAKWLC-ETCHSEVESEK 156

Query: 479 RSN 481
           R N
Sbjct: 157 RKN 159



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.309    0.124    0.354 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,094,035
Number of extensions: 1007838
Number of successful extensions: 2562
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2554
Number of HSP's successfully gapped: 3
Length of query: 719
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 611
Effective length of database: 11,396,689
Effective search space: 6963376979
Effective search space used: 6963376979
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 160 (66.2 bits)