BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0537300 Os10g0537300|AK068850
         (1096 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0537300  Conserved hypothetical protein                     2172   0.0  
Os03g0120800  Hypothetical protein                                 96   1e-19

>Os10g0537300 Conserved hypothetical protein
          Length = 1096

 Score = 2172 bits (5628), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1056/1096 (96%), Positives = 1056/1096 (96%)

Query: 1    MLPYHGDRHRGXXXXXXXXXXXXXXXXXXXXFTVDCPRPAADPRVRNPNPPGLDLPTAPS 60
            MLPYHGDRHRG                    FTVDCPRPAADPRVRNPNPPGLDLPTAPS
Sbjct: 1    MLPYHGDRHRGSPPPYPAAAAHSSLSPSAAPFTVDCPRPAADPRVRNPNPPGLDLPTAPS 60

Query: 61   LYTTAAAGDWGSSSWMEXXXXXXXXXXXXXXXXXXXXKGEAPETAPYGIFPGTCQIGNFM 120
            LYTTAAAGDWGSSSWME                    KGEAPETAPYGIFPGTCQIGNFM
Sbjct: 61   LYTTAAAGDWGSSSWMEPPASYMAPSPAAATPPPPAYKGEAPETAPYGIFPGTCQIGNFM 120

Query: 121  VTRPLRSESSQLTSAKGPGTWLGSSEVLPSGVGPSVFSPQQNTFVHKSEDAEPYPTQRGL 180
            VTRPLRSESSQLTSAKGPGTWLGSSEVLPSGVGPSVFSPQQNTFVHKSEDAEPYPTQRGL
Sbjct: 121  VTRPLRSESSQLTSAKGPGTWLGSSEVLPSGVGPSVFSPQQNTFVHKSEDAEPYPTQRGL 180

Query: 181  LQYPPQYPAYDKYMTQLSSCSTNVPPPVMWTPPANSSEVVEQMFPVMNKNTGESSSSFSS 240
            LQYPPQYPAYDKYMTQLSSCSTNVPPPVMWTPPANSSEVVEQMFPVMNKNTGESSSSFSS
Sbjct: 181  LQYPPQYPAYDKYMTQLSSCSTNVPPPVMWTPPANSSEVVEQMFPVMNKNTGESSSSFSS 240

Query: 241  YMNPCRINLDYFDCMWNEQKDLGHQTTDKHHGKWSSSASNAGDHLLNSLGADHRAARCFG 300
            YMNPCRINLDYFDCMWNEQKDLGHQTTDKHHGKWSSSASNAGDHLLNSLGADHRAARCFG
Sbjct: 241  YMNPCRINLDYFDCMWNEQKDLGHQTTDKHHGKWSSSASNAGDHLLNSLGADHRAARCFG 300

Query: 301  NGRPIQESSEMKYDRGSFNSKVSPSEVGYVQSREFSSELPEVNNPTVDSPCWKGAPIAYP 360
            NGRPIQESSEMKYDRGSFNSKVSPSEVGYVQSREFSSELPEVNNPTVDSPCWKGAPIAYP
Sbjct: 301  NGRPIQESSEMKYDRGSFNSKVSPSEVGYVQSREFSSELPEVNNPTVDSPCWKGAPIAYP 360

Query: 361  PSFGIMKNTDNSHSVNGVGGYQIEQSPEWSLKYSELFSKHQEVSASESVKSDALKTFKLP 420
            PSFGIMKNTDNSHSVNGVGGYQIEQSPEWSLKYSELFSKHQEVSASESVKSDALKTFKLP
Sbjct: 361  PSFGIMKNTDNSHSVNGVGGYQIEQSPEWSLKYSELFSKHQEVSASESVKSDALKTFKLP 420

Query: 421  ETRKNTEDNKEVLPVCIGVHNGIGNNASYFPEEQNSRRQKCYDSTGDCKNMIAANQQENL 480
            ETRKNTEDNKEVLPVCIGVHNGIGNNASYFPEEQNSRRQKCYDSTGDCKNMIAANQQENL
Sbjct: 421  ETRKNTEDNKEVLPVCIGVHNGIGNNASYFPEEQNSRRQKCYDSTGDCKNMIAANQQENL 480

Query: 481  SVSKAKLLGEDSSNHIGSITEESINKGPSPLGSAPRALVENLSESLHVNVCSQAAGAEEC 540
            SVSKAKLLGEDSSNHIGSITEESINKGPSPLGSAPRALVENLSESLHVNVCSQAAGAEEC
Sbjct: 481  SVSKAKLLGEDSSNHIGSITEESINKGPSPLGSAPRALVENLSESLHVNVCSQAAGAEEC 540

Query: 541  TQAQICAKGGQQPRYYSDSGGSMLKTSSESRSKSRAELLKQMHDLSAMLLSTCNSVPLQG 600
            TQAQICAKGGQQPRYYSDSGGSMLKTSSESRSKSRAELLKQMHDLSAMLLSTCNSVPLQG
Sbjct: 541  TQAQICAKGGQQPRYYSDSGGSMLKTSSESRSKSRAELLKQMHDLSAMLLSTCNSVPLQG 600

Query: 601  YEEELLQLVIQNLRDASSCISKVQNMSCSRNNLWMAMPEHSLVENDSELKTSISQAVAKL 660
            YEEELLQLVIQNLRDASSCISKVQNMSCSRNNLWMAMPEHSLVENDSELKTSISQAVAKL
Sbjct: 601  YEEELLQLVIQNLRDASSCISKVQNMSCSRNNLWMAMPEHSLVENDSELKTSISQAVAKL 660

Query: 661  PEDKTLDDIDVSQLSIYKNLWVEAEASACKLKYELQLTRVKLAAMENHNNTQVPVDLSKG 720
            PEDKTLDDIDVSQLSIYKNLWVEAEASACKLKYELQLTRVKLAAMENHNNTQVPVDLSKG
Sbjct: 661  PEDKTLDDIDVSQLSIYKNLWVEAEASACKLKYELQLTRVKLAAMENHNNTQVPVDLSKG 720

Query: 721  NKIFISTIPNSKPQNSTAYPANLQCQGADSCDGQLPAVNRSIIDGVDAEVIERLKFLQSN 780
            NKIFISTIPNSKPQNSTAYPANLQCQGADSCDGQLPAVNRSIIDGVDAEVIERLKFLQSN
Sbjct: 721  NKIFISTIPNSKPQNSTAYPANLQCQGADSCDGQLPAVNRSIIDGVDAEVIERLKFLQSN 780

Query: 781  LKDCRAFCQNNCEEQEEASKKPCAIEDAVMARLRVLNSCPDNIASLKQENNNHHQLDTST 840
            LKDCRAFCQNNCEEQEEASKKPCAIEDAVMARLRVLNSCPDNIASLKQENNNHHQLDTST
Sbjct: 781  LKDCRAFCQNNCEEQEEASKKPCAIEDAVMARLRVLNSCPDNIASLKQENNNHHQLDTST 840

Query: 841  NRADNIDDAVMSRLRILKSRPDNVNPLGQESSKHEPDAATGTNNFIDNAVMSRLRILKSR 900
            NRADNIDDAVMSRLRILKSRPDNVNPLGQESSKHEPDAATGTNNFIDNAVMSRLRILKSR
Sbjct: 841  NRADNIDDAVMSRLRILKSRPDNVNPLGQESSKHEPDAATGTNNFIDNAVMSRLRILKSR 900

Query: 901  PDNANSLGQESSKHEPDASTGTNDLIDNAVMSRLRILKCRDDNINSLDDAIKQHVEACTD 960
            PDNANSLGQESSKHEPDASTGTNDLIDNAVMSRLRILKCRDDNINSLDDAIKQHVEACTD
Sbjct: 901  PDNANSLGQESSKHEPDASTGTNDLIDNAVMSRLRILKCRDDNINSLDDAIKQHVEACTD 960

Query: 961  QPNWDEDGVVAKIQAPNGDTVSTADGFQNILHSNNFVRHSEGKDSVSGLDSPGDATCSDE 1020
            QPNWDEDGVVAKIQAPNGDTVSTADGFQNILHSNNFVRHSEGKDSVSGLDSPGDATCSDE
Sbjct: 961  QPNWDEDGVVAKIQAPNGDTVSTADGFQNILHSNNFVRHSEGKDSVSGLDSPGDATCSDE 1020

Query: 1021 DNGRKAPSDEVNDKTAVQSEGSFPMNIGWPLSTMDSHICTAGSQETPLISSSVHRYDIFP 1080
            DNGRKAPSDEVNDKTAVQSEGSFPMNIGWPLSTMDSHICTAGSQETPLISSSVHRYDIFP
Sbjct: 1021 DNGRKAPSDEVNDKTAVQSEGSFPMNIGWPLSTMDSHICTAGSQETPLISSSVHRYDIFP 1080

Query: 1081 PKWEHMLKENFFHPGK 1096
            PKWEHMLKENFFHPGK
Sbjct: 1081 PKWEHMLKENFFHPGK 1096



>Os03g0120800 Hypothetical protein
          Length = 650

 Score = 96.3 bits (238), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 182/429 (42%), Gaps = 107/429 (24%)

Query: 571 RSKSRAELLKQMHDLSAMLLSTCNS-VPLQGYEEELLQLVIQNLRDASSCISKVQNMSCS 629
           R    AEL+K M++LS  L+S+CN    L    +EL+Q  IQNL   S   SK  N+S  
Sbjct: 265 RCNYHAELIKSMYNLSVALISSCNGDYELDESYQELIQSAIQNLSSLSPKRSK--NLS-- 320

Query: 630 RNNLWMAMPEHSLVENDSELKTSISQAVAKLPEDKTLDDIDVSQLSIYKNLWVEAEASAC 689
                                         + E+K+ +D D   L+ YKNLW+EAEAS C
Sbjct: 321 ------------------------------IEENKSGNDKDAHVLA-YKNLWIEAEASMC 349

Query: 690 KLKYELQLTRVKLAAMENHNNTQ-----VPVDLSKGNKIFISTIPN-------SKPQN-- 735
           KLKYELQL R++L A++ H+        +P+D+   +     ++         SK QN  
Sbjct: 350 KLKYELQLARMEL-ALKYHSQQSGAPPTIPLDVQDSSLSKSKSLLCDEVLDDPSKQQNHV 408

Query: 736 --STAYPANLQCQGADSCDGQLPAVNRSIIDGVDAEVIERLKFLQSNLKDCRAFCQNNCE 793
             +T   A L  +  ++ DGQ P VNRSI + V+A V  +L+ L+S      +F + + E
Sbjct: 409 KENTICSATLLPEEGNTGDGQSPKVNRSIANEVEAGVFTQLRVLRSRGDSICSFGEGSDE 468

Query: 794 EQEEAS--KKPCAIEDAVMARLRVLNSCPDNIASLKQENNNHHQLDTSTNRADNIDDAVM 851
           EQ+E S  KK    ++     +  L S  D++ S+                   + + + 
Sbjct: 469 EQQETSNNKKTNGFDNTAAVSMDTLKSGDDSMNSV-------------------VVEPIK 509

Query: 852 SRLRILKSRPDNVNPLGQESSKHEPDAATGTNNFIDNAVMSRLRILKSRPDNANSLGQES 911
            R+               ESSK + D A    +F+      RL    S  D        S
Sbjct: 510 ERV---------------ESSKTDVDTAAPFYSFV-----KRLSGSSSSSDVDFDKFLSS 549

Query: 912 SKHEPDASTGTNDLIDNAVMSRLRILKCRDDNINSLDDAIKQHVEACTDQPNWDEDGV-- 969
            K + D +          VM+R +   C   NI SLDD   Q  +A ++    ++D +  
Sbjct: 550 IKKQTDVT----------VMARHKDFVCDKGNIRSLDDTTNQ-CQAASNTKQLEDDALRF 598

Query: 970 VAKIQAPNG 978
              ++ P G
Sbjct: 599 FQSLKIPEG 607



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.311    0.127    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 39,202,761
Number of extensions: 1714606
Number of successful extensions: 3815
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3802
Number of HSP's successfully gapped: 2
Length of query: 1096
Length of database: 17,035,801
Length adjustment: 111
Effective length of query: 985
Effective length of database: 11,240,047
Effective search space: 11071446295
Effective search space used: 11071446295
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 161 (66.6 bits)