Os10g0537300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0537300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.7 | 0.192 | 11 | 0.992 | 0.455 | -0.291 | 0.101 | 0.646 | 0.358 | 4.07 | 20.5 | 22584 | -- | -- |
| 16.87 | 0.191 | 11 | 0.973 | 0.441 | -0.473 | 0.179 | -- | 0.35 | 3.89 | 19.8 | 21551 | -- | -- |
| 16.67 | 0.19 | 11 | 0.977 | 0.45 | -0.322 | -- | 0.539 | 0.342 | 4.12 | 19.79 | 22546 | -- | -- |
| 16.82 | 0.191 | 11 | 0.978 | 0.46 | -0.485 | -- | -- | 0.338 | 4.05 | 19.8 | 22445 | -- | -- |
| 27.81 | 0.246 | 11 | 0.991 | -- | -0.326 | -- | 0.498 | 0.351 | -- | 19.8 | 21926 | -- | -- |
| 20 | 0.21 | 11.1 | 0.517 | 0.448 | -- | 0.107 | -- | 0.165 | 4.14 | -- | -- | -- | -- |
| 20.03 | 0.21 | 11.1 | 0.516 | 0.448 | -- | -- | -- | 0.165 | 4.14 | -- | -- | -- | -- |
| 27.96 | 0.246 | 11 | 0.986 | -- | -0.489 | -- | -- | 0.33 | -- | 18.95 | 21921 | -- | -- |
| 23.79 | 0.227 | 11.1 | -- | 0.447 | 0.265 | -- | -- | 0.0151 | 4.17 | 22.01 | 47520 | -- | -- |
| 30.94 | 0.26 | 11.1 | 0.534 | -- | -- | -- | -- | 0.177 | -- | -- | -- | -- | -- |
| 27.05 | 0.243 | 11.1 | -- | 0.458 | -- | -- | -- | 0.107 | 4.12 | -- | -- | -- | -- |
| 33.2 | 0.269 | 11.1 | -- | -- | -0.228 | -- | -- | 0.183 | -- | 26.29 | 47357 | -- | -- |
| 38.47 | 0.29 | 11.1 | -- | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 10 | 16.19 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 18 | 16.26 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 2 |
| 43 | 16.39 | humidity | 90 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 45 | 16.40 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 65 | 16.44 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 5 |
| 69 | 16.46 | humidity | 90 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 70 | 16.46 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 73 | 16.47 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 74 | 16.47 | temperature | 25 | 1440 | > th | dose independent | rect. | 17 | 5 |
| 82 | 16.48 | humidity | 80 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 91 | 16.49 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 92 | 16.49 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 98 | 16.50 | humidity | 80 | 43200 | > th | dose independent | rect. | 13 | 5 |
| 116 | 16.52 | humidity | 80 | 43200 | > th | dose independent | rect. | 10 | 8 |
| 117 | 16.52 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 132 | 16.53 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 136 | 16.53 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 139 | 16.53 | humidity | 80 | 43200 | < th | dose independent | rect. | 10 | 7 |
| 142 | 16.53 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 159 | 16.55 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 172 | 16.55 | humidity | 90 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 181 | 16.55 | radiation | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 188 | 16.56 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 191 | 16.56 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 205 | 16.56 | humidity | 70 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 214 | 16.57 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |
| 225 | 16.57 | humidity | 90 | 43200 | > th | dose independent | rect. | 12 | 12 |
| 235 | 16.58 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 237 | 16.58 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 247 | 16.58 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 8 |
| 252 | 16.58 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 255 | 16.58 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 281 | 16.59 | humidity | 90 | 43200 | > th | dose independent | sin | 19 | NA |
| 283 | 16.59 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 293 | 16.59 | humidity | 80 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 306 | 16.59 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 313 | 16.59 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 328 | 16.60 | wind | 3 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 365 | 16.60 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 368 | 16.60 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 369 | 16.60 | temperature | 15 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 390 | 16.61 | humidity | 90 | 43200 | < th | dose independent | sin | 19 | NA |
| 392 | 16.61 | humidity | 80 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 416 | 16.61 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 3 | NA |
| 424 | 16.61 | humidity | 70 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 447 | 16.61 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 23 | 11 |
| 478 | 16.62 | humidity | 80 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 479 | 16.62 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 498 | 16.62 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 1 | NA |
| 585 | 16.63 | humidity | 90 | 43200 | < th | dose independent | rect. | 8 | 17 |
| 591 | 16.63 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 703 | 16.64 | humidity | 60 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 712 | 16.64 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 15 |
| 719 | 16.64 | atmosphere | 1005 | 14400 | > th | dose dependent | no | NA | NA |
| 722 | 16.64 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 731 | 16.64 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 23 | 6 |
| 778 | 16.64 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 20 |
| 810 | 16.64 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 11 | 23 |
| 824 | 16.65 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 845 | 16.65 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 16 |
| 851 | 16.65 | radiation | 1 | 43200 | < th | dose dependent | sin | 10 | NA |
| 854 | 16.65 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 856 | 16.65 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 899 | 16.65 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 910 | 16.65 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 17 |
| 972 | 16.66 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 11 |
| 985 | 16.66 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 994 | 16.66 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 21 |
| 995 | 16.66 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 21 |