Os03g0120800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0120800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.99 | 0.24 | 2.9 | -0.0556 | 0.117 | 0.128 | -0.0549 | -0.665 | -0.0446 | 10.6 | -0.1689 | 6652 | -- | -- |
| 26.66 | 0.24 | 2.89 | -0.086 | 0.115 | 0.0739 | -0.055 | -- | -0.0551 | 10.3 | -0.6771 | 6903 | -- | -- |
| 26 | 0.237 | 2.9 | -0.057 | 0.116 | 0.139 | -- | -0.723 | -0.0448 | 10.6 | 0.1496 | 6652 | -- | -- |
| 26.64 | 0.24 | 2.89 | -0.0852 | 0.116 | 0.077 | -- | -- | -0.0488 | 10.4 | -0.2002 | 13678 | -- | -- |
| 26.83 | 0.241 | 2.91 | -0.0879 | -- | 0.186 | -- | -0.971 | -0.0526 | -- | 0.3418 | 6650 | -- | -- |
| 26.78 | 0.243 | 2.89 | -0.0761 | 0.118 | -- | -0.0529 | -- | -0.0671 | 10.8 | -- | -- | -- | -- |
| 26.8 | 0.242 | 2.89 | -0.0782 | 0.118 | -- | -- | -- | -0.0672 | 10.8 | -- | -- | -- | -- |
| 27.47 | 0.244 | 2.89 | -0.0823 | -- | 0.0743 | -- | -- | -0.0512 | -- | -0.1833 | 13669 | -- | -- |
| 26.81 | 0.241 | 2.89 | -- | 0.119 | 0.07 | -- | -- | -0.0455 | 10.8 | -0.2121 | 13747 | -- | -- |
| 27.66 | 0.246 | 2.9 | -0.0806 | -- | -- | -- | -- | -0.0679 | -- | -- | -- | -- | -- |
| 26.96 | 0.243 | 2.89 | -- | 0.118 | -- | -- | -- | -0.0585 | 10.8 | -- | -- | -- | -- |
| 27.66 | 0.245 | 2.89 | -- | -- | 0.0771 | -- | -- | -0.0416 | -- | -0.08883 | 13884 | -- | -- |
| 27.83 | 0.246 | 2.9 | -- | -- | -- | -- | -- | -0.059 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.50 | humidity | 60 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 3 | 23.57 | humidity | 60 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 4 | 23.58 | humidity | 60 | 30 | < th | dose independent | rect. | 17 | 17 |
| 9 | 23.58 | humidity | 60 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 10 | 23.59 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 12 | 23.59 | humidity | 60 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 27 | 23.61 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 31 | 23.61 | humidity | 60 | 10 | < th | dose independent | rect. | 9 | 1 |
| 144 | 23.61 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 147 | 23.61 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 283 | 23.63 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 289 | 23.65 | humidity | 60 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 290 | 23.66 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 2 |
| 336 | 23.73 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 401 | 23.80 | humidity | 60 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 459 | 23.89 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 748 | 24.36 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 1 |
| 789 | 24.38 | wind | 1 | 10 | < th | dose dependent | sin | 21 | NA |
| 824 | 24.45 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |
| 901 | 24.58 | radiation | 40 | 10 | > th | dose independent | sin | 12 | NA |
| 999 | 24.72 | wind | 1 | 10 | > th | dose independent | sin | 21 | NA |