BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0520100 Os10g0520100|Os10g0520100
(405 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0520100 Protein of unknown function DUF295 family protein 706 0.0
Os10g0519800 Protein of unknown function DUF295 family protein 379 e-105
Os10g0520400 Protein of unknown function DUF295 family protein 96 3e-20
>Os10g0520100 Protein of unknown function DUF295 family protein
Length = 405
Score = 706 bits (1822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/405 (89%), Positives = 363/405 (89%)
Query: 1 MDWSSLPADLLLAVFARLPRDADRARFRAVCXXXXXXXXXXXXXXWFVGSRTDRFGRGAA 60
MDWSSLPADLLLAVFARLPRDADRARFRAVC WFVGSRTDRFGRGAA
Sbjct: 1 MDWSSLPADLLLAVFARLPRDADRARFRAVCAGWGAAAASWRPRPWFVGSRTDRFGRGAA 60
Query: 61 MSSFWLXXXXXXXXXLVPFAAAVPAGLEFLSSSSHGYLALSDPMATPKAVALVNPVTGRR 120
MSSFWL LVPFAAAVPAGLEFLSSSSHGYLALSDPMATPKAVALVNPVTGRR
Sbjct: 61 MSSFWLSRRSRGGGGLVPFAAAVPAGLEFLSSSSHGYLALSDPMATPKAVALVNPVTGRR 120
Query: 121 IRLPPIGFFKRWHDVATVVLSADPDTADEWAAVAVGFPTNCLAYYSSAAGAWTPLGFSAA 180
IRLPPIGFFKRWHDVATVVLSADPDTADEWAAVAVGFPTNCLAYYSSAAGAWTPLGFSAA
Sbjct: 121 IRLPPIGFFKRWHDVATVVLSADPDTADEWAAVAVGFPTNCLAYYSSAAGAWTPLGFSAA 180
Query: 181 GYAGVEHFRGRFYVAFKSQLCVCDVEATVPAVIPLEQLIDDDDGGGENVDTGRRVVETHL 240
GYAGVEHFRGRFYVAFKSQLCVCDVEATVPAVIPLEQLIDDDDGGGENVDTGRRVVETHL
Sbjct: 181 GYAGVEHFRGRFYVAFKSQLCVCDVEATVPAVIPLEQLIDDDDGGGENVDTGRRVVETHL 240
Query: 241 VECDGELLLVSVHDNLERNPEDTTIFXXXXXXXXXXXXXXXXXXXRVVEVLRVEWVAGGA 300
VECDGELLLVSVHDNLERNPEDTTIF RVVEVLRVEWVAGGA
Sbjct: 241 VECDGELLLVSVHDNLERNPEDTTIFGDDDDHDGSSSSSSDSGDGRVVEVLRVEWVAGGA 300
Query: 301 VRLVRQEDLRSRALFLGRNHAFALSPEEFPSCRANCVYLVDQQGHPDGRVRVFDMNADER 360
VRLVRQEDLRSRALFLGRNHAFALSPEEFPSCRANCVYLVDQQGHPDGRVRVFDMNADER
Sbjct: 301 VRLVRQEDLRSRALFLGRNHAFALSPEEFPSCRANCVYLVDQQGHPDGRVRVFDMNADER 360
Query: 361 WEPEEAAVVARNYARRDETIFPPDDGRRDAQSAGWARRGWFFPKY 405
WEPEEAAVVARNYARRDETIFPPDDGRRDAQSAGWARRGWFFPKY
Sbjct: 361 WEPEEAAVVARNYARRDETIFPPDDGRRDAQSAGWARRGWFFPKY 405
>Os10g0519800 Protein of unknown function DUF295 family protein
Length = 439
Score = 379 bits (974), Expect = e-105, Method: Compositional matrix adjust.
Identities = 219/441 (49%), Positives = 261/441 (59%), Gaps = 61/441 (13%)
Query: 2 DWSSLPADLLLAVFARLPRDADRARFRAVCXXXXXXXXXXXXXXWFVGSRTDRFG--RGA 59
DW+SLPADL+ +V RL D +RARF AVC W VGSR D + GA
Sbjct: 22 DWASLPADLMSSVLRRLAGDRERARFGAVCKGWGAAAARLPSRPWLVGSRADDWTGLSGA 81
Query: 60 AMSSFWLXXXXXXXXXLVPFAAAVPAGLEFLSSSSHGYLALSDPMATPKAVALVNPVTGR 119
MSSFWL LVPFA VPAG E+LSSS GYLALS+P P+ + L NPVTGR
Sbjct: 82 TMSSFWLSLGQRG---LVPFAVDVPAGSEYLSSS-RGYLALSNPTGNPRVITLFNPVTGR 137
Query: 120 RIRLPPIGFFKRWHDVATVVLSADPDTADEWAAVAVGFPTNCLAYYSSAAGAWTPLGFS- 178
RI LPPIGFFK+WHDVAT+VLSADPDTA+ W+AVAVGFP NCLAYYSSA W P+ F+
Sbjct: 138 RIPLPPIGFFKKWHDVATIVLSADPDTAEAWSAVAVGFPANCLAYYSSATNDWKPIRFNY 197
Query: 179 AAGYAGVEHFRGRFYVAFKSQLCVCDVEATVPAVIPLE---------------------- 216
++GYAGVEHFRGRFYVAFKS++ V +V+ PA I +E
Sbjct: 198 SSGYAGVEHFRGRFYVAFKSEISVLEVDVATPAAIKIEIAHDDDDEDADVFDIDLNLDHE 257
Query: 217 ------------QLIDDDDGGGENVDTGRRVVETHLVECDGELLLVSVHDNLERNPEDTT 264
D G G+ + +VETHLV+C GELL+VS+HD +
Sbjct: 258 TSNSDDDDDDDDDCADTLAGLGDEDYPLKCLVETHLVDCGGELLVVSMHDEVA------- 310
Query: 265 IFXXXXXXXXXXXXXXXXXXXRVVEVLRVEWVAGGAVRLVRQEDLRSRALFLGRNHAFAL 324
+ R V+V RVEW+ GA RLVR EDL ALF+GRNHAF+L
Sbjct: 311 -YKKPSPESAVGRKPRSHDDERWVDVHRVEWLESGAARLVRMEDLGGYALFVGRNHAFSL 369
Query: 325 SPEEFPSCRANCVYLVDQQGHPDGRVRVFDMNADERWEPEEAAVVARNYARRDETIFPPD 384
SPEEFP+C+ NC+Y V+QQGHPDG VRV + N D +A DE IF PD
Sbjct: 370 SPEEFPACQPNCIYSVEQQGHPDGLVRVVNFNDD-----------TTEWACPDEDIF-PD 417
Query: 385 DGRRDAQSAGWARRGWFFPKY 405
D R + +AGWARRGW FPKY
Sbjct: 418 DDMRGSPTAGWARRGWVFPKY 438
>Os10g0520400 Protein of unknown function DUF295 family protein
Length = 371
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 140/376 (37%), Gaps = 47/376 (12%)
Query: 3 WSSLPADLLLAVFARLPRDADRARFRAVCXX-XXXXXXXXXXXXWFVGSRTDRFGRGAAM 61
WSSLPADLL V RL DAD VC W V R + G +
Sbjct: 6 WSSLPADLLREVSGRLYSDADHLHIHQVCTHWRAATLPVSACRPWVVAGRALQRGL-VTI 64
Query: 62 SSFWLXXXXXXXXXLVPFAAAVPAGLEFLSSSSHGYLALSDPMATPKAVALVNPVTGRRI 121
+ L + P GL +S G+LAL+D +P +AL P++G I
Sbjct: 65 GDYSLRLPGGGAERMDAGLRRAPPGLRHCCGASRGWLALTDDARSPTRLALWEPLSGAEI 124
Query: 122 RLPPIGFFKRWHDVATVVLSADPDTADEWAAVAV---GFPTNCLAYYSSAAGAWTPLGFS 178
LP + R V LS DP + W A+ G AWT L
Sbjct: 125 PLPCLSPITR------VSLSGDPLASPGWVAMVSQLKGREGQKTLVCRRGDAAWTMLFEH 178
Query: 179 AAGYAGVEHFRGR--FYVAFKSQLCVCDVEATVPAVIPLEQLIDDDDGGGENVDTGRRVV 236
G F G +Y+ S + VCD++A + Q +
Sbjct: 179 GTSEIGSVVFHGGKVYYIDIMSNIVVCDLDADGASGAKCTQFFHVRTSVSMLCSCDKFHP 238
Query: 237 E--THLVECDGELLLVSVHDNLERNPEDTTIFXXXXXXXXXXXXXXXXXXXRVVEVLRVE 294
E HLV CDGE+LLV + +P + E+ + E
Sbjct: 239 ERGVHLVACDGEVLLVVL--RWGGHPS-------------------------LAEIYKPE 271
Query: 295 WVAGGAVRL-VRQEDLRSRALFLGRNHAFALSPEEFPSCRANCVYLVDQQGHPDGRVRVF 353
W + L R DL +LF+GR F+LS +EFP+ + NCVY D+ + VF
Sbjct: 272 WKGNHQLGLGERVMDLGDHSLFVGRGDTFSLSAKEFPAIKRNCVYYADKNYKQQHWISVF 331
Query: 354 DMNADERWE----PEE 365
+ + E PEE
Sbjct: 332 HLEQPDVLEEIPYPEE 347
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.138 0.442
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,211,424
Number of extensions: 589878
Number of successful extensions: 1816
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 1806
Number of HSP's successfully gapped: 4
Length of query: 405
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 302
Effective length of database: 11,657,759
Effective search space: 3520643218
Effective search space used: 3520643218
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)