BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0519800 Os10g0519800|AK108172
(439 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0519800 Protein of unknown function DUF295 family protein 784 0.0
Os10g0520100 Protein of unknown function DUF295 family protein 374 e-104
Os10g0520400 Protein of unknown function DUF295 family protein 87 2e-17
>Os10g0519800 Protein of unknown function DUF295 family protein
Length = 439
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/439 (89%), Positives = 391/439 (89%)
Query: 1 MVSQXXXXXXXXXXXXXXXXXDWASLPADLMSSVLRRLAGDRERARFGAVCKGWGAAAAR 60
MVSQ DWASLPADLMSSVLRRLAGDRERARFGAVCKGWGAAAAR
Sbjct: 1 MVSQVASPRPRRVRRAGGGGSDWASLPADLMSSVLRRLAGDRERARFGAVCKGWGAAAAR 60
Query: 61 LPSRPWLVGSRADDWTGLSGATMSSFWLSLGQRGLVPFAVDVPAGSEYLSSSRGYLALSN 120
LPSRPWLVGSRADDWTGLSGATMSSFWLSLGQRGLVPFAVDVPAGSEYLSSSRGYLALSN
Sbjct: 61 LPSRPWLVGSRADDWTGLSGATMSSFWLSLGQRGLVPFAVDVPAGSEYLSSSRGYLALSN 120
Query: 121 PTGNPRVITLFNPVTGRRIPLPPIGFFKKWHDVATIVLSADPDTAEAWSAVAVGFPANCL 180
PTGNPRVITLFNPVTGRRIPLPPIGFFKKWHDVATIVLSADPDTAEAWSAVAVGFPANCL
Sbjct: 121 PTGNPRVITLFNPVTGRRIPLPPIGFFKKWHDVATIVLSADPDTAEAWSAVAVGFPANCL 180
Query: 181 AYYSSATNDWKPIRFNYSSGYAGVEHFRGRFYVAFKSEISVLEVDVATPXXXXXXXXXXX 240
AYYSSATNDWKPIRFNYSSGYAGVEHFRGRFYVAFKSEISVLEVDVATP
Sbjct: 181 AYYSSATNDWKPIRFNYSSGYAGVEHFRGRFYVAFKSEISVLEVDVATPAAIKIEIAHDD 240
Query: 241 XXXXXXXXXXXLNLDHETSNSXXXXXXXXXCADTLAGLGDEDYPLKCLVETHLVDCGGEL 300
LNLDHETSNS CADTLAGLGDEDYPLKCLVETHLVDCGGEL
Sbjct: 241 DDEDADVFDIDLNLDHETSNSDDDDDDDDDCADTLAGLGDEDYPLKCLVETHLVDCGGEL 300
Query: 301 LVVSMHDEVAYKKPSPESAVGRKPRSHDDERWVDVHRVEWLESGAARLVRMEDLGGYALF 360
LVVSMHDEVAYKKPSPESAVGRKPRSHDDERWVDVHRVEWLESGAARLVRMEDLGGYALF
Sbjct: 301 LVVSMHDEVAYKKPSPESAVGRKPRSHDDERWVDVHRVEWLESGAARLVRMEDLGGYALF 360
Query: 361 VGRNHAFSLSPEEFPACQPNCIYSVEQQGHPDGLVRVVNFNDDTTEWACPDEDIFPDDDM 420
VGRNHAFSLSPEEFPACQPNCIYSVEQQGHPDGLVRVVNFNDDTTEWACPDEDIFPDDDM
Sbjct: 361 VGRNHAFSLSPEEFPACQPNCIYSVEQQGHPDGLVRVVNFNDDTTEWACPDEDIFPDDDM 420
Query: 421 RGSPTAGWARRGWVFPKYS 439
RGSPTAGWARRGWVFPKYS
Sbjct: 421 RGSPTAGWARRGWVFPKYS 439
>Os10g0520100 Protein of unknown function DUF295 family protein
Length = 405
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 230/441 (52%), Positives = 273/441 (61%), Gaps = 61/441 (13%)
Query: 22 DWASLPADLMSSVLRRLAGDRERARFGAVCKGWGAAAARLPSRPWLVGSRADDWTGLSGA 81
DW+SLPADL+ +V RL D +RARF AVC GWGAAAA RPW VGSR D + GA
Sbjct: 2 DWSSLPADLLLAVFARLPRDADRARFRAVCAGWGAAAASWRPRPWFVGSRTDRFG--RGA 59
Query: 82 TMSSFWLSLGQRG---LVPFAVDVPAGSEYLSSS-RGYLALSNPTGNPRVITLFNPVTGR 137
MSSFWLS RG LVPFA VPAG E+LSSS GYLALS+P P+ + L NPVTGR
Sbjct: 60 AMSSFWLSRRSRGGGGLVPFAAAVPAGLEFLSSSSHGYLALSDPMATPKAVALVNPVTGR 119
Query: 138 RIPLPPIGFFKKWHDVATIVLSADPDTAEAWSAVAVGFPANCLAYYSSATNDWKPIRFNY 197
RI LPPIGFFK+WHDVAT+VLSADPDTA+ W+AVAVGFP NCLAYYSSA W P+ F+
Sbjct: 120 RIRLPPIGFFKRWHDVATVVLSADPDTADEWAAVAVGFPTNCLAYYSSAAGAWTPLGFS- 178
Query: 198 SSGYAGVEHFRGRFYVAFKSEISVLEVDVATPXXXXXXXXXXXXXXXXXXXXXXLNLDHE 257
++GYAGVEHFRGRFYVAFKS++ V +V+ P + L+
Sbjct: 179 AAGYAGVEHFRGRFYVAFKSQLCVCDVEATVP--------------------AVIPLEQ- 217
Query: 258 TSNSXXXXXXXXXCADTLAGLGDEDYPLKCLVETHLVDCGGELLVVSMHDEVA------- 310
D G G+ + +VETHLV+C GELL+VS+HD +
Sbjct: 218 -------------LIDDDDGGGENVDTGRRVVETHLVECDGELLLVSVHDNLERNPEDTT 264
Query: 311 -YKKPSPESAVGRKPRSHDDERWVDVHRVEWLESGAARLVRMEDLGGYALFVGRNHAFSL 369
+ D R V+V RVEW+ GA RLVR EDL ALF+GRNHAF+L
Sbjct: 265 IFGDDDDHDGSSSSSSDSGDGRVVEVLRVEWVAGGAVRLVRQEDLRSRALFLGRNHAFAL 324
Query: 370 SPEEFPACQPNCIYSVEQQGHPDGLVRVVNFNDD-----------TTEWACPDEDIF-PD 417
SPEEFP+C+ NC+Y V+QQGHPDG VRV + N D +A DE IF PD
Sbjct: 325 SPEEFPSCRANCVYLVDQQGHPDGRVRVFDMNADERWEPEEAAVVARNYARRDETIFPPD 384
Query: 418 DDMRGSPTAGWARRGWVFPKY 438
D R + +AGWARRGW FPKY
Sbjct: 385 DGRRDAQSAGWARRGWFFPKY 405
>Os10g0520400 Protein of unknown function DUF295 family protein
Length = 371
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 156/402 (38%), Gaps = 72/402 (17%)
Query: 23 WASLPADLMSSVLRRLAGDRERARFGAVCKGWGAAAARLPS-RPWLVGSRADDWTGLSGA 81
W+SLPADL+ V RL D + VC W AA + + RPW+V RA GL
Sbjct: 6 WSSLPADLLREVSGRLYSDADHLHIHQVCTHWRAATLPVSACRPWVVAGRALQ-RGL--V 62
Query: 82 TMSSFWLSL----GQRGLVPFAVDVPAGSEYLSSSRGYLALSNPTGNPRVITLFNPVTGR 137
T+ + L L +R P +SRG+LAL++ +P + L+ P++G
Sbjct: 63 TIGDYSLRLPGGGAERMDAGLRRAPPGLRHCCGASRGWLALTDDARSPTRLALWEPLSGA 122
Query: 138 RIPLPPIGFFKKWHDVATIVLSADPDTAEAWSAVAV---GFPANCLAYYSSATNDWKPIR 194
IPLP + + + LS DP + W A+ G W +
Sbjct: 123 EIPLPCLS------PITRVSLSGDPLASPGWVAMVSQLKGREGQKTLVCRRGDAAWTML- 175
Query: 195 FNYSSGYAGVEHFRGR--FYVAFKSEISVLEVDVATPXXXXXXXXXXXXXXXXXXXXXXL 252
F + + G F G +Y+ S I V ++D
Sbjct: 176 FEHGTSEIGSVVFHGGKVYYIDIMSNIVVCDLDADG------------------------ 211
Query: 253 NLDHETSNSXXXXXXXXXCADTLAGLGDEDYPLKCLVETHLVDCGGELLVVSMHDEVAYK 312
S + + ++ D+ +P + HLV C GE+L+V V
Sbjct: 212 -----ASGAKCTQFFHVRTSVSMLCSCDKFHPER---GVHLVACDGEVLLV-----VLRW 258
Query: 313 KPSPESAVGRKPRSHDDERWVDVHRVEWLESGAARLVRMEDLGGYALFVGRNHAFSLSPE 372
P A KP W H++ E R+ DLG ++LFVGR FSLS +
Sbjct: 259 GGHPSLAEIYKP------EWKGNHQLGLGE-------RVMDLGDHSLFVGRGDTFSLSAK 305
Query: 373 EFPACQPNCIYSVEQQGHPDGLVRVVNFN--DDTTEWACPDE 412
EFPA + NC+Y ++ + V + D E P+E
Sbjct: 306 EFPAIKRNCVYYADKNYKQQHWISVFHLEQPDVLEEIPYPEE 347
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.136 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,762,367
Number of extensions: 709210
Number of successful extensions: 2014
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 2009
Number of HSP's successfully gapped: 4
Length of query: 439
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 335
Effective length of database: 11,605,545
Effective search space: 3887857575
Effective search space used: 3887857575
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)