BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0504600 Os10g0504600|AY224548
(982 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0504600 Chorion 2 family protein 1855 0.0
Os03g0107400 Prefoldin domain containing protein 99 1e-20
Os11g0442200 96 1e-19
Os10g0363700 Hypothetical protein 91 5e-18
Os10g0547000 Protein kinase PKN/PRK1, effector domain conta... 87 5e-17
>Os10g0504600 Chorion 2 family protein
Length = 982
Score = 1855 bits (4804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 926/982 (94%), Positives = 926/982 (94%)
Query: 1 MFKSARWRXXXXXXXKAKAVFKLQFHATQVPEVGWEAMMVVVTPRDAGRPTARTESAQVA 60
MFKSARWR KAKAVFKLQFHATQVPEVGWEAMMVVVTPRDAGRPTARTESAQVA
Sbjct: 1 MFKSARWRGGGGGGGKAKAVFKLQFHATQVPEVGWEAMMVVVTPRDAGRPTARTESAQVA 60
Query: 61 DGACQWPAPVYEATKLPSSGKDKIYQFLVYDTGSTKAALLGEATLNLSEYADAFKPWIVT 120
DGACQWPAPVYEATKLPSSGKDKIYQFLVYDTGSTKAALLGEATLNLSEYADAFKPWIVT
Sbjct: 61 DGACQWPAPVYEATKLPSSGKDKIYQFLVYDTGSTKAALLGEATLNLSEYADAFKPWIVT 120
Query: 121 LPLSGSPGAQLHVTIQRVVXXXXXXXXXXXDDASENGGDVSPVVARTPPRKTLQSQLSRC 180
LPLSGSPGAQLHVTIQRVV DDASENGGDVSPVVARTPPRKTLQSQLSRC
Sbjct: 121 LPLSGSPGAQLHVTIQRVVGGGGGGGGGCGDDASENGGDVSPVVARTPPRKTLQSQLSRC 180
Query: 181 XXXXXXXXXXXXXXXXXMSPMQDGLVINKPPGMRFSARRNMRGPVDHLHNSNSFDAISVS 240
MSPMQDGLVINKPPGMRFSARRNMRGPVDHLHNSNSFDAISVS
Sbjct: 181 EDEEAEKARAAAAAADAMSPMQDGLVINKPPGMRFSARRNMRGPVDHLHNSNSFDAISVS 240
Query: 241 GSDGSSGRFTPKNNASMHSTFLQEGTNTLSPLRNTLTSSGDWSGSSAPDASTDGSTSNSG 300
GSDGSSGRFTPKNNASMHSTFLQEGTNTLSPLRNTLTSSGDWSGSSAPDASTDGSTSNSG
Sbjct: 241 GSDGSSGRFTPKNNASMHSTFLQEGTNTLSPLRNTLTSSGDWSGSSAPDASTDGSTSNSG 300
Query: 301 EAGLREAEDDVEKLRSEIATLTRKLDVSDMELQTLRKQIVKESRRGQDLSKEVGSLRDER 360
EAGLREAEDDVEKLRSEIATLTRKLDVSDMELQTLRKQIVKESRRGQDLSKEVGSLRDER
Sbjct: 301 EAGLREAEDDVEKLRSEIATLTRKLDVSDMELQTLRKQIVKESRRGQDLSKEVGSLRDER 360
Query: 361 DALRRECEALRGMKKTIHDANGSGKRLSSGEDPWSQIEELKQELGHEKNLNGDLHLQLQK 420
DALRRECEALRGMKKTIHDANGSGKRLSSGEDPWSQIEELKQELGHEKNLNGDLHLQLQK
Sbjct: 361 DALRRECEALRGMKKTIHDANGSGKRLSSGEDPWSQIEELKQELGHEKNLNGDLHLQLQK 420
Query: 421 MQESNSELLLAVKDLDEMLEQKNKEISLLHEETLEDPQEAEYELALSNVHNAGHKIDISE 480
MQESNSELLLAVKDLDEMLEQKNKEISLLHEETLEDPQEAEYELALSNVHNAGHKIDISE
Sbjct: 421 MQESNSELLLAVKDLDEMLEQKNKEISLLHEETLEDPQEAEYELALSNVHNAGHKIDISE 480
Query: 481 TSSVQEKEDELMLDALAKTTDGIATSELQNKIVELSNEIELYKKDREDLEMQMEQLALDY 540
TSSVQEKEDELMLDALAKTTDGIATSELQNKIVELSNEIELYKKDREDLEMQMEQLALDY
Sbjct: 481 TSSVQEKEDELMLDALAKTTDGIATSELQNKIVELSNEIELYKKDREDLEMQMEQLALDY 540
Query: 541 EILKQENHDISSRLEQTQLREQLRMQYECSAHLSIISDLEANVESLENELQEQSKRLEAD 600
EILKQENHDISSRLEQTQLREQLRMQYECSAHLSIISDLEANVESLENELQEQSKRLEAD
Sbjct: 541 EILKQENHDISSRLEQTQLREQLRMQYECSAHLSIISDLEANVESLENELQEQSKRLEAD 600
Query: 601 IQEVMRAKVEQEQRAIKAEESLRKARWNNATTAERLQEEFKMLSSQVSSAFSANEQLLMQ 660
IQEVMRAKVEQEQRAIKAEESLRKARWNNATTAERLQEEFKMLSSQVSSAFSANEQLLMQ
Sbjct: 601 IQEVMRAKVEQEQRAIKAEESLRKARWNNATTAERLQEEFKMLSSQVSSAFSANEQLLMQ 660
Query: 661 ARKXXXXXXXXXXXXXXXXXXXXXDLGSIQEQHRVKVQQLLTLVDFKSKETDRLVMELKS 720
ARK DLGSIQEQHRVKVQQLLTLVDFKSKETDRLVMELKS
Sbjct: 661 ARKEAAELQLQKGQLEELLQKAQEDLGSIQEQHRVKVQQLLTLVDFKSKETDRLVMELKS 720
Query: 721 KSDEFQNQKRCNEAKLSVLSEEIDQLKAKIENLSNERDNLFEENEQKDKELAANCQKDMF 780
KSDEFQNQKRCNEAKLSVLSEEIDQLKAKIENLSNERDNLFEENEQKDKELAANCQKDMF
Sbjct: 721 KSDEFQNQKRCNEAKLSVLSEEIDQLKAKIENLSNERDNLFEENEQKDKELAANCQKDMF 780
Query: 781 LQDRDAEIALLNKELASIKDQVQTYLEEINTLKSSKNEKEEMIEKLQSEIRSLKFEYDNL 840
LQDRDAEIALLNKELASIKDQVQTYLEEINTLKSSKNEKEEMIEKLQSEIRSLKFEYDNL
Sbjct: 781 LQDRDAEIALLNKELASIKDQVQTYLEEINTLKSSKNEKEEMIEKLQSEIRSLKFEYDNL 840
Query: 841 KILMSTNDSEKHNLASQVLKLRRALESREDVKQNGVKSDEDNHHATSKRIKHDDGTTGSC 900
KILMSTNDSEKHNLASQVLKLRRALESREDVKQNGVKSDEDNHHATSKRIKHDDGTTGSC
Sbjct: 841 KILMSTNDSEKHNLASQVLKLRRALESREDVKQNGVKSDEDNHHATSKRIKHDDGTTGSC 900
Query: 901 NVLPSTNRHNANGDCNGHDRRDAAHDQSVKELEILKERNTALEEELKELHGRYSEISLKF 960
NVLPSTNRHNANGDCNGHDRRDAAHDQSVKELEILKERNTALEEELKELHGRYSEISLKF
Sbjct: 901 NVLPSTNRHNANGDCNGHDRRDAAHDQSVKELEILKERNTALEEELKELHGRYSEISLKF 960
Query: 961 AEVEGERQQLVMTVRALKNSLR 982
AEVEGERQQLVMTVRALKNSLR
Sbjct: 961 AEVEGERQQLVMTVRALKNSLR 982
>Os03g0107400 Prefoldin domain containing protein
Length = 950
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 118/464 (25%), Positives = 199/464 (42%), Gaps = 35/464 (7%)
Query: 1 MFKSARWRXXXXXXXKAKAVFKLQFHATQVPEVGWEAMMVVVTPRDAGRPTARTESAQVA 60
MFK R R + F F A QVP V + +V+ D G+ A++ A
Sbjct: 1 MFKLHRHRSSDRVGQRFDFRFS-NFRAVQVPAVSDRLFLSIVSV-DTGKTVAKSGKAAAR 58
Query: 61 DGACQWPAPVYEATKLP----SSGKDKIYQFLVYDTGSTKAALLGEATLNLSEYADAFKP 116
G CQWP + E+ S D+ +V GS K+ +LGE LNL+ + + P
Sbjct: 59 SGICQWPDSILESIWFSQDEVSKEFDECQYKIVVSVGSIKSGVLGEIFLNLTNFLNLVDP 118
Query: 117 WIVTLPLS-GSPGAQLHVTIQRVVXXXXXXXXXXXDDASENGGDVSP----VVARTPPRK 171
++LPL + G L + +Q + D S D SP + +++
Sbjct: 119 TAISLPLKRCNSGTVLQLKVQYLGAKSKSSGVRSWKDLSPRLDDRSPTNDDIDSKSDGSD 178
Query: 172 TLQSQLSRCXXXX-XXXXXXXXXXXXXMSPMQDGLVINKPPGMRFSARRNMRGPVD---- 226
++ ++ R MS G + G + R N+ P D
Sbjct: 179 SVANRSVRSSSGNPLGGTTQDELGNREMSFSASGSHRSSNSGDSTADRTNL-SPRDSSNG 237
Query: 227 --HLHNSNSFDAISVSGSDGSSGRFTPKNNASMHSTFLQEGTNTLSPLRNTLTSSGDWSG 284
H+ +S + VS S G G + ++ S ++ G N L NT S G+ G
Sbjct: 238 GMHVGRQDSASSY-VSASRGDDGFRSNNSSFSSRAS----GPNVLQG--NTPKSFGNGFG 290
Query: 285 SSAPDASTDGSTSNSGEAGLREAEDDVEKLRSEIATLTRKLDVSDMELQTLRKQIVKESR 344
+ TS+S + L AE+ +E+LR E R +L+ L+K+ ++S+
Sbjct: 291 QLSL------GTSDSSKELLEAAEETIEELRDEAKMWERHSRKLKADLEMLKKECSEKSK 344
Query: 345 RGQDLSKEVGSLRDERDALRRECEALRGMKKTIHDANGSGKRLSSGEDPWSQIE-ELKQE 403
+ +L E+ + ERD+ R+E E L+ K + G G+ W ++ EL+ +
Sbjct: 345 QQTELEAELSAAHAERDSYRQEIEELKSSMKEVTTRQKVGGTSKYGD--WIDLQKELEDD 402
Query: 404 LGHEKNLNGDLHLQLQKMQESNSELLLAVKDLDEMLEQKNKEIS 447
+ K N +L +QL+ QE+N EL+ +++L+E +E++ EIS
Sbjct: 403 VKFLKESNANLSIQLKNTQEANIELVSILQELEETIEEQKAEIS 446
>Os11g0442200
Length = 272
Score = 95.9 bits (237), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/78 (74%), Positives = 64/78 (82%), Gaps = 3/78 (3%)
Query: 203 DGLVINKPPGMRFSARRNMRGPVDHLHNSNSFDAISVSGSDGSSGRFTPKNNASMHSTFL 262
DGLV NKPPGMRF+ARRNMRGPVDHLHNSNSFDAISVSGSDGSSGRFT KNNASM + L
Sbjct: 171 DGLVTNKPPGMRFTARRNMRGPVDHLHNSNSFDAISVSGSDGSSGRFTVKNNASMQDSRL 230
Query: 263 QEGTNTLSPLRNTLTSSG 280
++T + T T+SG
Sbjct: 231 ---SSTCFSTQTTSTASG 245
>Os10g0363700 Hypothetical protein
Length = 111
Score = 90.5 bits (223), Expect = 5e-18, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 69/110 (62%), Gaps = 7/110 (6%)
Query: 30 VPEVGWEAMMVVVTPRDAGRPTARTESAQVADGACQWPAPVYEATKLPSSGK-----DKI 84
+P GW+ + + D G+ +A+T A V +G+C+WP P+YEAT+L + DK+
Sbjct: 1 IPSTGWDKLFLSFISADTGKVSAKTNKANVRNGSCKWPDPIYEATRLLQDSRTKTYDDKL 60
Query: 85 YQFLVYDTGSTKAALLGEATLNLSEYADAFKPWIVTLPLSGSP-GAQLHV 133
Y+ +V G++++++LGE +NL+E+A+A KP + LPL G G LHV
Sbjct: 61 YKIVV-AMGTSRSSILGELDVNLAEFAEALKPVSIALPLRGCEFGTILHV 109
>Os10g0547000 Protein kinase PKN/PRK1, effector domain containing protein
Length = 1578
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 189/469 (40%), Gaps = 75/469 (15%)
Query: 25 FHATQVPEVGWEAMMVVVTPRDAGRPTARTESAQVADGACQWPAPVYEATKLPSSGKDKI 84
F A QVP V + +M+ + D G+ A++ A GACQWP + E+ +
Sbjct: 25 FRAVQVPVVS-DRLMLSIVAVDTGKTIAKSTKAAALSGACQWPDSILESIWFSQDQVSEE 83
Query: 85 YQ----FLVYDTGSTKAALLGEATLNLSEYADAFKPWIVTLPLS-GSPGAQLHVTIQRVV 139
+Q V GST + +LGE LNL+ Y + + ++LPL G L + IQ +
Sbjct: 84 FQECQCRFVVSMGSTNSGILGEVFLNLTNYLSSLESTAISLPLKRCDSGTILQLNIQCLG 143
Query: 140 XXXXXXXXXXXDDASENGGDVSPVVARTPPRKTLQSQLSRCXXXXXXXXXXXXXXXXXMS 199
+ + +G D ++ RT + + L S
Sbjct: 144 AKSKTSRTNDDTECTSDGFD--SMLNRTTHSLS-GNDLGGSYQDEAGNRDASLSASRSYS 200
Query: 200 PMQDGLVINKPPGMRFSARRNMRGPVDHLHNSNSFDAISVSGSDGSSGRFTPKNNASMHS 259
N PP + N + HN S DAI VS + ++ S +
Sbjct: 201 GDSTTDRTNMPPSDNLNDELNTQR-----HNFASPDAIHVSADHVDEASRSNNSSFSSQT 255
Query: 260 TFLQEGTNTLSPLRNTLTSSGDWSGSSAPDASTDGS-TSNSGEAGLREAEDDVEKLRSEI 318
P RN L G+ + SA D S S S++ + L AE+ +++LR E
Sbjct: 256 -----------PSRNML--QGNNAQPSASDLSQLSSGVSHASKDVLENAEETIDELRGEA 302
Query: 319 ATL---TRKLD--------VS----------DME-------------LQTLRKQIVKESR 344
TRKL VS D+E L+TL+K+ +S+
Sbjct: 303 KMWQRKTRKLKQGLETLKKVSTDKSKQRSEQDLEKMWQRKTRKLKQGLETLKKECADKSK 362
Query: 345 RGQDLSKEVGSLRDERDALRRECEALR------GMKKTIHDANGSGKRLSSGEDPWSQIE 398
+ +L E+ ERD+LR+E E L+ ++TI + SG D +
Sbjct: 363 QQSELELELSISISERDSLRQEIEELKRSLEEVTARQTISRSPRSG-------DAIELQK 415
Query: 399 ELKQELGHEKNLNGDLHLQLQKMQESNSELLLAVKDLDEMLEQKNKEIS 447
E++ ++ K N L QL K QE+N EL+ +++L+E +E + EIS
Sbjct: 416 EVEDDVQFLKESNASLATQLNKAQEANIELVSILQELEETIEVQRAEIS 464
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.309 0.125 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 28,013,857
Number of extensions: 1128750
Number of successful extensions: 6119
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 6049
Number of HSP's successfully gapped: 16
Length of query: 982
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 872
Effective length of database: 11,292,261
Effective search space: 9846851592
Effective search space used: 9846851592
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 161 (66.6 bits)