Os03g0107400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Prefoldin domain containing protein.
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Os03g0107400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Prefoldin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 157.77 | 0.59 | 6.68 | -0.8 | 0.858 | -1.14 | 0.838 | -3.07 | -0.269 | 4.87 | 5.618 | 1389 | -- | -- |
| 159.75 | 0.589 | 6.73 | -0.716 | 0.823 | -0.838 | 0.876 | -- | -0.3 | 4.61 | 5.805 | 802 | -- | -- |
| 159.44 | 0.588 | 6.69 | -0.799 | 0.858 | -1.16 | -- | -3.07 | -0.277 | 5.01 | 5.9 | 1388 | -- | -- |
| 161.71 | 0.592 | 6.74 | -0.713 | 0.833 | -0.82 | -- | -- | -0.31 | 4.68 | 5.863 | 837 | -- | -- |
| 191.17 | 0.647 | 6.72 | -0.661 | -- | -0.604 | -- | -0.962 | -0.255 | -- | 5.048 | 1885 | -- | -- |
| 166.56 | 0.605 | 6.73 | -0.543 | 0.847 | -- | 0.753 | -- | -0.283 | 5.13 | -- | -- | -- | -- |
| 167.92 | 0.607 | 6.73 | -0.543 | 0.854 | -- | -- | -- | -0.286 | 5.27 | -- | -- | -- | -- |
| 168.8 | 0.605 | 6.74 | -0.715 | -- | -0.762 | -- | -- | -0.368 | -- | 2.9 | 155 | -- | -- |
| 173.73 | 0.614 | 6.73 | -- | 0.843 | -0.436 | -- | -- | -0.243 | 5.06 | 6 | 837 | -- | -- |
| 206.01 | 0.671 | 6.74 | -0.513 | -- | -- | -- | -- | -0.265 | -- | -- | -- | -- | -- |
| 175.69 | 0.62 | 6.72 | -- | 0.845 | -- | -- | -- | -0.226 | 5.3 | -- | -- | -- | -- |
| 182.92 | 0.63 | 6.72 | -- | -- | -0.654 | -- | -- | -0.186 | -- | 2.754 | 139 | -- | -- |
| 212.96 | 0.681 | 6.73 | -- | -- | -- | -- | -- | -0.208 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.68 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 2 | 148.77 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 4 | 150.15 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 22 |
| 16 | 152.45 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 20 | 152.53 | wind | 5.0 | 90 | < th | dose dependent | rect. | 3 | 14 |
| 25 | 152.72 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 34 | 153.03 | wind | 3.0 | 30 | < th | dose dependent | rect. | 4 | 18 |
| 37 | 153.06 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 47 | 153.23 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 50 | 153.28 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 5 | 9 |
| 51 | 153.31 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 5 | 5 |
| 58 | 153.43 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 67 | 153.51 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 80 | 153.76 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 22 |
| 83 | 153.82 | wind | 3.0 | 90 | < th | dose independent | rect. | 3 | 15 |
| 106 | 154.08 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 113 | 154.16 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 140 | 154.48 | wind | 5.0 | 720 | < th | dose independent | rect. | 17 | 6 |
| 144 | 154.49 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 149 | 154.53 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 6 | 3 |
| 153 | 154.56 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 164 | 154.65 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 165 | 154.65 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 184 | 154.80 | wind | 1.0 | 30 | > th | dose dependent | rect. | 1 | 14 |
| 198 | 154.90 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 200 | 154.92 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 5 | 9 |
| 204 | 154.94 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 209 | 154.97 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 4 | 11 |
| 214 | 155.00 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 1 | 15 |
| 218 | 155.02 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 220 | 155.03 | wind | 5.0 | 720 | > th | dose independent | rect. | 16 | 7 |
| 236 | 155.08 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 21 | 18 |
| 253 | 155.14 | wind | 9.0 | 90 | < th | dose independent | rect. | 3 | 22 |
| 254 | 155.15 | humidity | 90.0 | 4320 | > th | dose dependent | sin | 2 | NA |
| 297 | 155.29 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 6 | NA |
| 312 | 155.35 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 316 | 155.37 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 6 | NA |
| 319 | 155.37 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 3 | NA |
| 358 | 155.51 | wind | 5.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 362 | 155.53 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 20 |
| 368 | 155.54 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 21 | 18 |
| 394 | 155.60 | atmosphere | 995.0 | 14400 | < th | dose dependent | no | NA | NA |
| 396 | 155.60 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 16 |
| 439 | 155.61 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 22 |
| 449 | 155.62 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 1 | 2 |
| 455 | 155.64 | wind | 5.0 | 1440 | > th | dose independent | rect. | 9 | 13 |
| 462 | 155.64 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 1 | 23 |
| 465 | 155.65 | wind | 5.0 | 720 | < th | dose independent | rect. | 10 | 14 |
| 486 | 155.68 | wind | 5.0 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 502 | 155.70 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 2 |
| 503 | 155.70 | wind | 5.0 | 1440 | < th | dose independent | rect. | 8 | 13 |
| 504 | 155.70 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 507 | 155.71 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 546 | 155.76 | wind | 9.0 | 90 | < th | dose independent | rect. | 1 | 2 |
| 547 | 155.76 | temperature | 10.0 | 90 | > th | dose independent | rect. | 1 | 2 |
| 549 | 155.76 | temperature | 30.0 | 90 | < th | dose independent | rect. | 1 | 2 |
| 550 | 155.76 | humidity | 50.0 | 90 | > th | dose independent | rect. | 1 | 2 |
| 554 | 155.76 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 1 | 2 |
| 556 | 155.76 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 2 |
| 563 | 155.76 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 22 |
| 564 | 155.76 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 15 | NA |
| 565 | 155.76 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 567 | 155.76 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 597 | 155.78 | wind | 5.0 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 608 | 155.81 | wind | 9.0 | 90 | < th | dose dependent | sin | 5 | NA |
| 635 | 155.87 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 640 | 155.88 | wind | 5.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 663 | 155.91 | temperature | 25.0 | 10 | < th | dose independent | rect. | 24 | 3 |
| 677 | 155.93 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 678 | 155.93 | wind | 1.0 | 30 | < th | dose dependent | rect. | 24 | 22 |
| 684 | 155.94 | wind | 3.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 691 | 155.95 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 1 | 2 |
| 693 | 155.95 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 8 |
| 724 | 155.98 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 3 | 5 |
| 755 | 156.02 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 756 | 156.02 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 775 | 156.06 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 783 | 156.08 | wind | 5.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 784 | 156.08 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 9 |
| 792 | 156.09 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 22 | NA |
| 800 | 156.10 | wind | 7.0 | 720 | < th | dose independent | rect. | 13 | 9 |
| 802 | 156.10 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 12 |
| 806 | 156.10 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 831 | 156.12 | wind | 5.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 844 | 156.13 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 3 |
| 852 | 156.14 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 22 | NA |
| 854 | 156.14 | wind | 5.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 855 | 156.14 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 8 |
| 865 | 156.14 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 22 | NA |
| 899 | 156.18 | wind | 3.0 | 90 | > th | dose independent | rect. | 23 | 16 |
| 906 | 156.19 | wind | 9.0 | 90 | < th | dose dependent | rect. | 1 | 2 |
| 930 | 156.22 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 966 | 156.24 | wind | 1.0 | 90 | > th | dose dependent | rect. | 19 | 20 |