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Os10g0504600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Chorion 2 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.02 (0.0455) R2 : 0.532
β1 : -2.25 (0.171) R2dD : 0.194 R2D : 0.0826
β2 : 1.46 (0.113) R2dC : 0.175 R2C : 0.218
β3 : 1.86 (0.131) R2dE : 0.221 R2E : 0.167
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.157 (0.097) R2dN8 : 0.00368 R2N8 : -0.00474
σ : 0.85
deviance : 333.29
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C
peak time of C : 21.2
E
wheather : temperature
threshold : 27.05
memory length : 1226
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
324.63 0.847 8.04 -2.43 1.48 1.91 1.58 -1.12 -0.179 21.4 27.28 1246 -- --
325.12 0.84 8.04 -2.22 1.49 1.85 1.61 -- -0.184 21.3 27.06 1245 -- --
333.3 0.85 8.03 -2.37 1.48 1.89 -- -0.534 -0.171 21.2 27.22 1231 -- --
333.29 0.85 8.02 -2.25 1.46 1.86 -- -- -0.157 21.2 27.05 1226 -- --
410.48 0.944 8.04 -2.39 -- 2.8 -- -0.364 -0.367 -- 25.01 943 -- --
461.39 1.01 8.02 -1.62 1.65 -- 1.92 -- -0.161 22 -- -- -- --
475.51 1.02 8.02 -1.7 1.65 -- -- -- -0.163 21.8 -- -- -- --
410.27 0.943 8.03 -2.39 -- 2.78 -- -- -0.387 -- 25.1 934 -- --
456.06 0.995 7.94 -- 1.6 1.39 -- -- 0.235 21.3 28.71 1233 -- --
638.08 1.18 7.98 -1.68 -- -- -- -- -0.164 -- -- -- -- --
551.28 1.1 7.98 -- 1.65 -- -- -- 0.0259 21.7 -- -- -- --
551.26 1.09 7.96 -- -- 2.29 -- -- -0.0758 -- 25.3 912 -- --
712.4 1.25 7.94 -- -- -- -- -- 0.0223 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 326.15 radiation 20 1440 > th dose independent rect. 16 16
2 328.39 radiation 20 1440 > th dose dependent rect. 16 16
7 331.98 radiation 20 1440 < th dose independent rect. 16 12
8 332.06 radiation 20 1440 < th dose independent rect. 16 1
13 332.55 radiation 40 1440 < th dose dependent rect. 15 17
14 332.58 radiation 20 1440 < th dose independent rect. 16 8
20 332.94 radiation 30 1440 < th dose dependent rect. 16 15
21 332.95 radiation 10 1440 > th dose independent rect. 15 19
26 333.12 humidity 70 1440 > th dose independent rect. 17 19
27 333.12 temperature 30 1440 < th dose independent rect. 18 20
28 333.14 temperature 30 1440 < th dose independent rect. 18 18
29 333.16 radiation 20 1440 > th dose independent rect. 16 1
44 333.21 radiation 10 1440 > th dose independent rect. 15 21
46 333.41 radiation 10 1440 > th dose independent sin 12 NA
57 334.15 temperature 25 1440 > th dose dependent rect. 7 1
58 334.19 temperature 30 1440 > th dose independent rect. 18 20
60 334.35 humidity 70 1440 < th dose independent rect. 17 19
62 334.42 humidity 70 1440 < th dose independent rect. 18 13
63 334.45 humidity 70 1440 < th dose independent sin 11 NA
64 334.45 humidity 80 1440 < th dose dependent rect. 16 20
72 334.72 humidity 70 1440 < th dose independent rect. 18 2
87 334.96 humidity 70 1440 > th dose independent sin 11 NA
89 335.09 temperature 30 1440 < th dose independent rect. 9 3
100 335.40 temperature 30 1440 < th dose independent rect. 9 5
107 335.64 humidity 80 1440 < th dose dependent rect. 16 5
113 335.81 temperature 30 1440 > th dose independent rect. 9 5
116 335.95 temperature 30 1440 < th dose independent sin 11 NA
119 336.14 temperature 30 1440 < th dose independent rect. 9 19
126 336.19 temperature 30 1440 < th dose independent rect. 9 16
127 336.19 temperature 30 1440 < th dose independent rect. 9 23
137 336.23 temperature 30 1440 < th dose independent rect. 9 12
139 336.24 temperature 30 1440 < th dose independent rect. 9 10
144 336.39 temperature 30 1440 > th dose dependent rect. 16 22
149 336.44 temperature 30 1440 > th dose dependent rect. 13 23
150 336.45 temperature 30 1440 > th dose independent rect. 9 10
164 336.47 temperature 30 1440 < th dose independent rect. 13 23
168 336.51 temperature 30 1440 > th dose dependent rect. 10 9
188 336.61 temperature 30 1440 > th dose dependent sin 18 NA
208 336.67 temperature 30 1440 > th dose independent sin 11 NA
228 336.71 temperature 30 1440 > th dose dependent rect. 17 19
229 336.72 temperature 30 1440 > th dose dependent no NA NA
325 336.76 temperature 30 1440 > th dose independent rect. 9 3
333 336.80 radiation 40 1440 < th dose dependent rect. 16 11
339 336.82 radiation 10 1440 > th dose dependent rect. 16 2
354 336.88 temperature 30 1440 < th dose independent rect. 6 22
357 336.89 temperature 30 1440 < th dose independent rect. 7 20
370 336.93 temperature 30 1440 < th dose independent rect. 2 23
373 336.95 temperature 30 1440 < th dose independent no NA NA
381 336.95 temperature 30 1440 < th dose independent rect. 20 23
382 336.95 temperature 30 1440 < th dose independent rect. 22 23
388 336.96 temperature 30 1440 < th dose independent rect. 22 21
400 336.97 temperature 30 1440 < th dose independent rect. 6 15
404 336.97 temperature 30 1440 < th dose independent rect. 2 19
413 336.98 temperature 30 1440 < th dose independent rect. 6 13
418 336.98 temperature 30 1440 < th dose independent rect. 2 17
435 337.00 temperature 30 1440 > th dose independent rect. 13 23
467 337.09 temperature 30 1440 > th dose dependent sin 10 NA
473 337.13 temperature 30 1440 < th dose independent rect. 20 18
513 337.20 temperature 30 1440 < th dose independent rect. 2 12
515 337.23 temperature 30 1440 < th dose independent rect. 6 8
539 337.32 radiation 40 1440 < th dose dependent rect. 16 9
556 337.34 humidity 70 1440 > th dose independent rect. 18 10
584 337.43 temperature 30 1440 > th dose independent no NA NA
682 337.47 humidity 70 1440 > th dose independent rect. 18 7
694 337.53 humidity 70 1440 > th dose independent rect. 18 13
719 337.68 temperature 25 720 > th dose dependent rect. 18 15
732 337.75 humidity 70 1440 > th dose independent rect. 18 3
751 337.83 radiation 40 1440 < th dose dependent rect. 16 2
755 337.86 temperature 30 1440 < th dose independent sin 19 NA
816 338.04 wind 1 1440 > th dose independent rect. 4 1
870 338.16 radiation 30 1440 < th dose dependent rect. 16 5
872 338.18 temperature 30 1440 > th dose independent rect. 15 4