BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0490900 Os10g0490900|Os10g0490900
         (179 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0490900  Similar to NtPRp27                                  359   e-100
Os10g0490800  Similar to NtPRp27                                  268   1e-72
Os10g0491000  Plant Basic Secretory Protein family protein        211   2e-55

>Os10g0490900 Similar to NtPRp27
          Length = 179

 Score =  359 bits (922), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 179/179 (100%), Positives = 179/179 (100%)

Query: 1   MLADASSFIWDTFEQPGDGGDRKPVDAVTLTVEDIDGVAFTSGDGIHLSARYVGGYSAAG 60
           MLADASSFIWDTFEQPGDGGDRKPVDAVTLTVEDIDGVAFTSGDGIHLSARYVGGYSAAG
Sbjct: 1   MLADASSFIWDTFEQPGDGGDRKPVDAVTLTVEDIDGVAFTSGDGIHLSARYVGGYSAAG 60

Query: 61  DVRAEVTGVLYHEATHVWQWDGRGGADGGLIEGIADFVRLRAGYAPPHWVQPGQGDRWDQ 120
           DVRAEVTGVLYHEATHVWQWDGRGGADGGLIEGIADFVRLRAGYAPPHWVQPGQGDRWDQ
Sbjct: 61  DVRAEVTGVLYHEATHVWQWDGRGGADGGLIEGIADFVRLRAGYAPPHWVQPGQGDRWDQ 120

Query: 121 GYDVTARFLDYCDSPAVVQGFVAQLNGKMKDGYSDDFFVQISGKTIDQLWQDYKAKYGG 179
           GYDVTARFLDYCDSPAVVQGFVAQLNGKMKDGYSDDFFVQISGKTIDQLWQDYKAKYGG
Sbjct: 121 GYDVTARFLDYCDSPAVVQGFVAQLNGKMKDGYSDDFFVQISGKTIDQLWQDYKAKYGG 179



>Os10g0490800 Similar to NtPRp27
          Length = 228

 Score =  268 bits (686), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 138/180 (76%), Positives = 151/180 (83%), Gaps = 4/180 (2%)

Query: 1   MLADASSFIWDTFEQPGDGGDRKPVDAVTLTVEDIDGVAFTSGDGIHLSARYVGGY-SAA 59
           +LADASSFIWD FEQPGDGGDRKPVDAVTLTVEDIDGVAFTSGDGIHLSARYVGGY S++
Sbjct: 50  VLADASSFIWDAFEQPGDGGDRKPVDAVTLTVEDIDGVAFTSGDGIHLSARYVGGYSSSS 109

Query: 60  GDVRAEVTGVLYHEATHVWQWDGRG-GADGGLIEGIADFVRLRAGYAPPHWVQPGQGDRW 118
           GDVR EVTGVLYHEATHVWQW  +   A   + EGIADFVRLRAGY    WVQPGQG+ W
Sbjct: 110 GDVRTEVTGVLYHEATHVWQWGLQDYAAHSWVYEGIADFVRLRAGYVAAGWVQPGQGNSW 169

Query: 119 DQGYDVTARFLDYCDSPAVVQGFVAQLNGKMKDGYSDDFFVQISGKTIDQLWQDYKAKYG 178
           +  Y VTARF DYCDS  V  GFVA +N K+KDGY+ D+FVQI+GKT+ QLWQDYKAKYG
Sbjct: 170 EDSYSVTARFFDYCDS--VKPGFVADINAKLKDGYNVDYFVQITGKTVQQLWQDYKAKYG 227



>Os10g0491000 Plant Basic Secretory Protein family protein
          Length = 229

 Score =  211 bits (538), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 110/180 (61%), Positives = 128/180 (71%), Gaps = 5/180 (2%)

Query: 1   MLADASSFIWDTFEQPGDGGDRKPVDAVTLTVEDIDGVAFTSGDGIHLSARYVGGYSAAG 60
           +LA ASSF W  F QP    DR+PVDAV L V D+DG+A TSG+ I L A YV G +   
Sbjct: 54  VLAAASSFTWSIFSQP-SAADRRPVDAVVLAVRDVDGIASTSGNTITLGAGYVAGVTG-N 111

Query: 61  DVRAEVTGVLYHEATHVWQWDGRG-GADGGLIEGIADFVRLRAGYAPPHWVQPGQGDRWD 119
           D + +VTGVLYHE  HVWQW  +  GA   + EGIADFVRLRAGY    WVQPGQG+ W+
Sbjct: 112 DFKTQVTGVLYHEVVHVWQWGLQDYGAHSWVYEGIADFVRLRAGYPAAGWVQPGQGNSWE 171

Query: 120 QGYDVTARFLDYCDSPAVVQGFVAQLNGKMKDGYSDDFFVQISGKTIDQLWQDYKAKYGG 179
             Y VTARF DYCDS  V  GFVA LN K+K+GY+ D+FVQI+GKT+ QLWQDYKAKYG 
Sbjct: 172 DSYSVTARFFDYCDS--VKPGFVADLNAKLKNGYNVDYFVQITGKTVQQLWQDYKAKYGN 229



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.140    0.452 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,671,508
Number of extensions: 372337
Number of successful extensions: 965
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 958
Number of HSP's successfully gapped: 3
Length of query: 179
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 85
Effective length of database: 12,127,685
Effective search space: 1030853225
Effective search space used: 1030853225
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 153 (63.5 bits)