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Os10g0490800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to NtPRp27.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0471) R2 : 0.452
β1 : 0.779 (0.192) R2dD : 0.034 R2D : -0.00322
β2 : 1.24 (0.098) R2dC : 0.194 R2C : 0.164
β3 : -1.8 (0.652) R2dE : 0.103 R2E : -0.388
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 20.3 (2.94) R2dD*E : 0.645 R2D*E : 0.112
γ1 : -0.304 (0.0881) R2dN8 : 0.0204 R2N8 : 0.0029
σ : 0.76
deviance : 265.96
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C
peak time of C : 22.3
E
wheather : wind
threshold : 9.4
memory length : 4369
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 18.8
open length of G : 2.17

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
266.19 0.767 12.4 0.799 1.24 -1.8 0.348 19.7 -0.318 22.3 9.24 4532 18.8 2.21
370.29 0.896 12.6 0.209 1.14 -0.964 0.423 -- -0.484 22 6.753 2194 21 2.81
265.96 0.76 12.4 0.779 1.24 -1.8 -- 20.3 -0.304 22.3 9.4 4369 18.8 2.17
285.8 0.787 12.4 -0.0561 1.08 2.04 -- -- -0.141 23 9.925 11508 18.6 2.33
359.72 0.883 12.3 0.818 -- -1.99 -- 20.7 -0.317 -- 9.4 4304 18.8 2.23
384.47 0.919 12.6 0.302 1.19 -- 0.265 -- -0.361 22.1 -- -- -- --
384.75 0.919 12.6 0.292 1.19 -- -- -- -0.361 22.1 -- -- -- --
365.48 0.89 12.4 0.15 -- 2.06 -- -- -0.0566 -- 9.926 11562 18.6 1.85
276.07 0.774 12.5 -- 1.25 2.07 -- -- -0.108 22.2 9.9 11508 18.7 2.26
470.41 1.01 12.5 0.308 -- -- -- -- -0.36 -- -- -- -- --
387 0.92 12.6 -- 1.19 -- -- -- -0.394 22.1 -- -- -- --
363.08 0.887 12.5 -- -- 2.05 -- -- -0.167 -- 10 11509 18.6 2.25
472.91 1.02 12.5 -- -- -- -- -- -0.394 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 267.12 wind 9.0 4320 > th dose dependent rect. 19 2
3 269.91 wind 9.0 4320 > th dose independent rect. 19 2
12 272.47 wind 9.0 4320 < th dose independent rect. 20 2
16 273.43 wind 9.0 4320 > th dose dependent rect. 19 7
37 275.62 atmosphere 995.0 14400 < th dose independent rect. 15 4
41 275.82 wind 1.0 43200 > th dose independent rect. 4 2
69 276.06 atmosphere 995.0 14400 > th dose independent rect. 12 3
81 276.16 atmosphere 995.0 14400 > th dose independent rect. 12 7
83 276.22 atmosphere 995.0 14400 < th dose dependent rect. 15 4
86 276.26 atmosphere 995.0 14400 > th dose independent rect. 10 9
90 276.35 atmosphere 995.0 14400 > th dose independent rect. 10 5
94 276.38 atmosphere 995.0 14400 > th dose independent rect. 12 5
177 277.22 atmosphere 995.0 14400 < th dose dependent rect. 16 1
178 277.24 atmosphere 995.0 14400 > th dose independent rect. 15 2
181 277.26 atmosphere 995.0 14400 < th dose dependent rect. 5 10
183 277.29 wind 9.0 4320 > th dose independent rect. 19 9
186 277.30 wind 9.0 4320 > th dose independent rect. 19 7
194 277.36 atmosphere 995.0 14400 < th dose independent rect. 18 1
198 277.36 atmosphere 995.0 14400 < th dose dependent rect. 18 1
220 277.87 atmosphere 995.0 14400 > th dose independent rect. 6 7
227 278.07 atmosphere 995.0 14400 < th dose dependent rect. 4 12
245 278.49 atmosphere 995.0 14400 < th dose independent rect. 4 11
268 279.51 humidity 80.0 43200 > th dose dependent rect. 13 1
276 279.82 wind 9.0 4320 < th dose independent rect. 19 8
278 280.12 atmosphere 995.0 14400 > th dose independent rect. 18 1
287 280.44 atmosphere 995.0 14400 < th dose independent rect. 24 16
297 280.56 precipitation 0.1 14400 > th dose dependent rect. 17 1
298 280.57 atmosphere 995.0 14400 > th dose independent rect. 2 13
325 281.12 atmosphere 995.0 14400 > th dose independent rect. 22 18
331 281.19 atmosphere 995.0 14400 > th dose independent rect. 19 21
376 282.27 atmosphere 995.0 14400 < th dose dependent sin 1 NA
386 282.65 atmosphere 995.0 14400 > th dose independent sin 4 NA
388 282.69 precipitation 0.1 14400 < th dose independent rect. 17 1
389 282.69 precipitation 0.1 14400 < th dose dependent rect. 17 1
390 282.76 precipitation 0.1 14400 > th dose independent rect. 17 1
403 282.92 radiation 1.0 14400 < th dose dependent rect. 22 5
408 283.22 atmosphere 995.0 14400 < th dose independent sin 4 NA
417 283.40 atmosphere 1005.0 14400 < th dose independent rect. 5 1
436 283.88 atmosphere 1005.0 14400 > th dose independent rect. 6 1
439 283.95 atmosphere 995.0 14400 < th dose dependent rect. 14 11
448 283.96 atmosphere 995.0 14400 < th dose dependent rect. 3 19
483 284.33 atmosphere 995.0 14400 < th dose dependent sin 19 NA
492 284.49 wind 1.0 43200 < th dose independent rect. 4 1
499 284.56 radiation 1.0 14400 < th dose dependent rect. 19 8
520 284.78 wind 1.0 43200 < th dose dependent rect. 4 1
530 284.92 radiation 1.0 14400 < th dose dependent rect. 23 1
597 286.14 atmosphere 1000.0 14400 < th dose dependent rect. 7 1
598 286.14 atmosphere 1000.0 14400 < th dose dependent rect. 5 3
627 286.65 temperature 20.0 1440 > th dose independent rect. 21 1
631 286.74 atmosphere 995.0 14400 > th dose independent no NA NA
632 286.74 atmosphere 995.0 14400 > th dose independent rect. 14 23
633 286.75 atmosphere 995.0 14400 > th dose independent rect. 8 23
635 286.75 atmosphere 995.0 14400 > th dose independent rect. 11 23
660 286.85 atmosphere 995.0 14400 > th dose independent rect. 4 23
664 286.86 atmosphere 995.0 14400 > th dose independent rect. 24 23
667 286.88 atmosphere 995.0 14400 > th dose independent rect. 2 23
724 287.32 atmosphere 995.0 14400 < th dose independent no NA NA
726 287.32 atmosphere 995.0 14400 < th dose independent rect. 14 16
800 287.46 atmosphere 995.0 14400 < th dose independent rect. 1 23
812 287.48 atmosphere 995.0 14400 > th dose independent rect. 14 18
847 287.63 temperature 20.0 1440 < th dose independent rect. 21 1
974 288.52 atmosphere 995.0 14400 < th dose dependent no NA NA