BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0477300 Os10g0477300|Os10g0477300
         (287 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0477300                                                      577   e-165
Os12g0463600                                                      280   1e-75
Os03g0625100                                                      280   1e-75
Os12g0551500                                                      159   3e-39
Os11g0495350                                                      156   1e-38

>Os10g0477300 
          Length = 287

 Score =  577 bits (1487), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 279/287 (97%), Positives = 279/287 (97%)

Query: 1   MRTTVPAPPVATHGRGLAALPATLPRTDSSQVQWKLIAVGCTRAVESVARLPLSGYRRLH 60
           MRTTVPAPPVATHGRGLAALPATLPRTDSSQVQWKLIAVGCTRAVESVARLPLSGYRRLH
Sbjct: 1   MRTTVPAPPVATHGRGLAALPATLPRTDSSQVQWKLIAVGCTRAVESVARLPLSGYRRLH 60

Query: 61  NFLTRHSAGRQDVLLRRKIQSLQRKLFFKCCLQQLNLSTNTHRGDSTSRGVPRHRTREEW 120
           NFLTRHSAGRQDVLLRRKIQSLQRKLFFKCCLQQLNLSTNTHRGDSTSRGVPRHRTREEW
Sbjct: 61  NFLTRHSAGRQDVLLRRKIQSLQRKLFFKCCLQQLNLSTNTHRGDSTSRGVPRHRTREEW 120

Query: 121 NAAMLYVLTNLTEVDDYIGKFIDEEWTRRGVPTRQQQENILRNGAGRDRPNFVSWFYQQP 180
           NAAMLYVLTNLTEVDDYIGKFIDEEWTRRGVPTRQQQENILRNGAGRDRPNFVSWFYQQP
Sbjct: 121 NAAMLYVLTNLTEVDDYIGKFIDEEWTRRGVPTRQQQENILRNGAGRDRPNFVSWFYQQP 180

Query: 181 IGRLQVPNDQDYNSVPNSNVVHYFQEDGLSGSFVIDLGQELNNDPEQVAISRDTEDICND 240
           IGRLQVPNDQDYNSVPNSNVVHYFQEDGLSGSFVIDLGQELNNDPEQVAISRDTEDICND
Sbjct: 181 IGRLQVPNDQDYNSVPNSNVVHYFQEDGLSGSFVIDLGQELNNDPEQVAISRDTEDICND 240

Query: 241 KDLKLLNGSSIQXXXXXXXXNESYCTSSSAEDDEVSTSRDILFDEYF 287
           KDLKLLNGSSIQ        NESYCTSSSAEDDEVSTSRDILFDEYF
Sbjct: 241 KDLKLLNGSSIQDEDDDDEDNESYCTSSSAEDDEVSTSRDILFDEYF 287



>Os12g0463600 
          Length = 285

 Score =  280 bits (715), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 137/148 (92%), Positives = 138/148 (93%)

Query: 140 KFIDEEWTRRGVPTRQQQENILRNGAGRDRPNFVSWFYQQPIGRLQVPNDQDYNSVPNSN 199
           KFIDEEWTRRGVPTRQQQENILRNGAGRDRPNFVSWFYQQPIGRLQVPNDQDYN VPNSN
Sbjct: 138 KFIDEEWTRRGVPTRQQQENILRNGAGRDRPNFVSWFYQQPIGRLQVPNDQDYNFVPNSN 197

Query: 200 VVHYFQEDGLSGSFVIDLGQELNNDPEQVAISRDTEDICNDKDLKLLNGSSIQXXXXXXX 259
           VVHYFQEDGLSGSFVIDLGQELNNDPEQVAISRDTEDICNDKDLKLLNGSSIQ       
Sbjct: 198 VVHYFQEDGLSGSFVIDLGQELNNDPEQVAISRDTEDICNDKDLKLLNGSSIQDEDDDDE 257

Query: 260 XNESYCTSSSAEDDEVSTSRDILFDEYF 287
            +ESYCTSSSAEDDEV TSRDILFDEYF
Sbjct: 258 DDESYCTSSSAEDDEVPTSRDILFDEYF 285



>Os03g0625100 
          Length = 189

 Score =  280 bits (715), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 136/148 (91%), Positives = 138/148 (93%)

Query: 140 KFIDEEWTRRGVPTRQQQENILRNGAGRDRPNFVSWFYQQPIGRLQVPNDQDYNSVPNSN 199
           KFIDEEWTRRG+PTRQQQENILRNGAGRDRPNFVSWFYQQPIGRLQVPNDQDYNSVPNSN
Sbjct: 42  KFIDEEWTRRGIPTRQQQENILRNGAGRDRPNFVSWFYQQPIGRLQVPNDQDYNSVPNSN 101

Query: 200 VVHYFQEDGLSGSFVIDLGQELNNDPEQVAISRDTEDICNDKDLKLLNGSSIQXXXXXXX 259
           VVHYFQEDGL GSFVIDLGQELNNDPEQVAISRDTEDICNDKDLKLLNGSSIQ       
Sbjct: 102 VVHYFQEDGLFGSFVIDLGQELNNDPEQVAISRDTEDICNDKDLKLLNGSSIQDEDDDDE 161

Query: 260 XNESYCTSSSAEDDEVSTSRDILFDEYF 287
            +ESYCTSSSAEDDEV TSRDILFDEYF
Sbjct: 162 DDESYCTSSSAEDDEVPTSRDILFDEYF 189




 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/70 (57%), Positives = 45/70 (64%), Gaps = 1/70 (1%)

Query: 1  MRTTVPAPPVATHGRGLAALPATLPRTDSSQVQWKLIAVGCTRAVESVARLPLSGYRRLH 60
          MRTTVPAPPVATHGRGLAALPATLPRTDSSQ     + V      E   R  +   ++  
Sbjct: 1  MRTTVPAPPVATHGRGLAALPATLPRTDSSQASIYCVGVSWKFIDEEWTRRGIPTRQQQE 60

Query: 61 NFLTRHSAGR 70
          N L R+ AGR
Sbjct: 61 NIL-RNGAGR 69



>Os12g0551500 
          Length = 283

 Score =  159 bits (401), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 75/137 (54%), Positives = 103/137 (75%), Gaps = 4/137 (2%)

Query: 115 RTREEWNAAMLYVLTNLTEVDDYIGKFIDEEWTRRGVPTRQQQENILRNGAGRDRPNFVS 174
           ++ ++ N A L+ + ++T +     KF+ EEW+RRG PTRQQ+EN+LRNGA   RPNFV+
Sbjct: 126 KSPQQSNDAFLFTVRSMTSLPHR--KFLHEEWSRRGKPTRQQKENLLRNGARNGRPNFVT 183

Query: 175 WFYQQPIGRLQVPNDQDYNSVPNSNVVHYFQEDGLSGSFVIDLGQELNNDPEQVAISRDT 234
           WFYQQP G++  P D+DY+ +PN++ VHYFQEDGL G+FV+DL + L+N  E  A SRD 
Sbjct: 184 WFYQQPTGKIAAPVDKDYDFLPNNDTVHYFQEDGLQGTFVVDLMEGLHNVSE--ATSRDA 241

Query: 235 EDICNDKDLKLLNGSSI 251
           E I NDKDL+LLNGS++
Sbjct: 242 EGIVNDKDLQLLNGSNV 258



>Os11g0495350 
          Length = 226

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 79/89 (88%), Positives = 80/89 (89%)

Query: 199 NVVHYFQEDGLSGSFVIDLGQELNNDPEQVAISRDTEDICNDKDLKLLNGSSIQXXXXXX 258
           NVVHYFQEDGLSGSFVIDLGQELNNDPEQVAISRDTEDICNDKDLKLLNGSSIQ      
Sbjct: 138 NVVHYFQEDGLSGSFVIDLGQELNNDPEQVAISRDTEDICNDKDLKLLNGSSIQDEDDDD 197

Query: 259 XXNESYCTSSSAEDDEVSTSRDILFDEYF 287
             +ESYCTSSSAEDDEV TSRDILFDEYF
Sbjct: 198 EDDESYCTSSSAEDDEVPTSRDILFDEYF 226



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,159,244
Number of extensions: 433111
Number of successful extensions: 875
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 874
Number of HSP's successfully gapped: 6
Length of query: 287
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 187
Effective length of database: 11,814,401
Effective search space: 2209292987
Effective search space used: 2209292987
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 155 (64.3 bits)