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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os10g0477300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.92 (0.0369) R2 : 0.171
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 4.76 (0.501) R2dE : 0.164 R2E : 0.158
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.183 (0.0777) R2dN8 : 0.013 R2N8 : 0.00688
σ : 0.693
deviance : 221.26
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_____
C
peak time of C : --
E
wheather : humidity
threshold : 67.93
memory length : 7
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 19
open length of G : 12.9

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
220.34 0.697 2.92 -0.0754 0.102 4.77 -0.304 -0.811 0.178 23 68 8 19 12.9
220.11 0.691 2.92 -0.07 0.107 4.74 -0.302 -- 0.181 22.9 67.91 7 19 12.9
220.47 0.692 2.92 -0.0674 0.104 4.76 -- -0.472 0.177 23.5 67.98 7 19 12.9
220.47 0.692 2.92 -0.0589 0.106 4.73 -- -- 0.176 23.4 67.92 7 19 12.9
221.18 0.693 2.92 -0.0584 -- 4.7 -- 0.658 0.176 -- 67.86 7 19 12.9
263.88 0.762 2.93 -0.124 0.113 -- -0.115 -- 0.14 23.2 -- -- -- --
263.92 0.761 2.93 -0.119 0.115 -- -- -- 0.14 22.7 -- -- -- --
221.18 0.693 2.92 -0.0633 -- 4.77 -- -- 0.179 -- 67.94 7 19 12.9
220.57 0.692 2.92 -- 0.107 4.74 -- -- 0.179 23.5 67.92 7 19 12.9
264.74 0.76 2.93 -0.116 -- -- -- -- 0.141 -- -- -- -- --
264.29 0.76 2.93 -- 0.114 -- -- -- 0.154 22.6 -- -- -- --
221.26 0.693 2.92 -- -- 4.76 -- -- 0.183 -- 67.93 7 19 12.9
265.1 0.76 2.93 -- -- -- -- -- 0.154 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 239.12 humidity 70 10 < th dose dependent rect. 19 13
3 239.67 wind 9 10 > th dose independent rect. 19 16
4 239.70 wind 9 10 > th dose dependent rect. 19 16
6 239.80 wind 9 30 > th dose independent rect. 1 10
10 239.80 wind 9 30 > th dose dependent rect. 1 10
21 239.88 humidity 60 10 < th dose independent rect. 10 1
23 239.88 wind 3 30 > th dose dependent rect. 10 1
24 239.88 humidity 60 10 < th dose dependent rect. 10 1
26 239.90 wind 5 10 > th dose independent rect. 10 1
160 242.36 humidity 70 10 < th dose independent rect. 19 13
198 242.95 humidity 70 10 < th dose dependent rect. 17 15
221 243.31 humidity 70 90 < th dose dependent rect. 18 14
269 243.58 humidity 80 90 < th dose dependent rect. 23 9
287 243.67 radiation 30 10 > th dose dependent rect. 7 1
305 243.68 radiation 30 10 > th dose independent rect. 7 1
355 243.70 humidity 80 90 < th dose dependent rect. 1 7
383 243.79 humidity 80 90 < th dose dependent rect. 3 5
424 243.86 humidity 80 90 < th dose dependent rect. 5 2
482 243.91 humidity 80 90 < th dose independent rect. 3 4
483 243.92 humidity 80 90 < th dose independent rect. 6 1