BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0472400 Os10g0472400|AK121929
         (319 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0472400  Protein of unknown function DUF862, eukaryotic...   516   e-147
Os02g0814000  Protein of unknown function DUF862, eukaryotic...   245   3e-65

>Os10g0472400 Protein of unknown function DUF862, eukaryotic domain containing
           protein
          Length = 319

 Score =  516 bits (1330), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/319 (81%), Positives = 261/319 (81%)

Query: 1   SPLHATQEILLLRKEQRLSCFRSQSRAKMADDDYPVKLHIYDLSQGMARQLSTTILGKAI 60
           SPLHATQEILLLRKEQRLSCFRSQSRAKMADDDYPVKLHIYDLSQGMARQLSTTILGKAI
Sbjct: 1   SPLHATQEILLLRKEQRLSCFRSQSRAKMADDDYPVKLHIYDLSQGMARQLSTTILGKAI 60

Query: 61  EAIWHTGVVVYGKEYFFGGGIQKDHPGRTPYGTPVRVEDLGVTHVPREIFEDFLQDINPR 120
           EAIWHTGVVVYGKEYFFGGGIQKDHPGRTPYGTPVRVEDLGVTHVPREIFEDFLQDINPR
Sbjct: 61  EAIWHTGVVVYGKEYFFGGGIQKDHPGRTPYGTPVRVEDLGVTHVPREIFEDFLQDINPR 120

Query: 121 YTPAXXXXXXXXXXXXXXEAAQFLVGSAIPSYILELPNEVMNSPIGALILPMIQGLETSL 180
           YTPA              EAAQFLVGSAIPSYILELPNEVMNSPIGALILPMIQGLETSL
Sbjct: 121 YTPANYNLLSNNCNNFTNEAAQFLVGSAIPSYILELPNEVMNSPIGALILPMIQGLETSL 180

Query: 181 RAGVAPQPPQFKPSPVAAVTATQSPPSGSIHVEPKSTASDKTEVDNNGGGIXXXXXXXXX 240
           RAGVAPQPPQFKPSPVAAVTATQSPPSGSIHVEPKSTASDKTEVDNNGGGI         
Sbjct: 181 RAGVAPQPPQFKPSPVAAVTATQSPPSGSIHVEPKSTASDKTEVDNNGGGIPPAVQPAPV 240

Query: 241 XXXXXXXXXXXXXXXXXXXXDPLREAKSRVQEEIKREFAAIMXXXXXXXXXXXXXXXRRV 300
                               DPLREAKSRVQEEIKREFAAIM               RRV
Sbjct: 241 AAATSPAAVAEASMAPPPPVDPLREAKSRVQEEIKREFAAIMATGAVQAGEAAALATRRV 300

Query: 301 MERHGLRRAAVAGGGMQRG 319
           MERHGLRRAAVAGGGMQRG
Sbjct: 301 MERHGLRRAAVAGGGMQRG 319



>Os02g0814000 Protein of unknown function DUF862, eukaryotic domain containing
           protein
          Length = 252

 Score =  245 bits (626), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 136/278 (48%), Positives = 159/278 (57%), Gaps = 34/278 (12%)

Query: 29  MADDDYPVKLHIYDLSQGMARQLSTTILGKAIEAIWHTGVVVYGKEYFFGGGIQKDHPGR 88
           MA++ Y V L++YDLS G+ARQLST+ LGK IEAIWHTGVVVYG EYFFGGGIQ    GR
Sbjct: 1   MAEEGYKVVLNVYDLSNGLARQLSTSFLGKPIEAIWHTGVVVYGNEYFFGGGIQSLAAGR 60

Query: 89  TPYGTPVRVEDLGVTHVPREIFEDFLQDINPRYTPAXXXXXXXXXXXXXXEAAQFLVGSA 148
           TPYG PVRV ++G TH+PRE+FED+L+DI+PRYT                E AQFLVG+ 
Sbjct: 61  TPYGRPVRVVEMGETHIPREVFEDYLRDISPRYTAETYRLLSHNCNNFSNEVAQFLVGAG 120

Query: 149 IPSYILELPNEVMNSPIGALILPMIQGLETSLRAGVAPQPPQFKPSPVAAVTATQSPP-S 207
           IP YIL LP EVM+SP+G LI+PMIQ LE++LR   APQ  QF PS V      Q+ P  
Sbjct: 121 IPDYILNLPAEVMSSPMGPLIMPMIQNLESTLRTNAAPQATQFVPSSVPPPPPPQNKPGE 180

Query: 208 GSIHVEPKSTASDKTEVDNNGGGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLREAK 267
           GS      S   DK      G                                DPL  A+
Sbjct: 181 GS----SSSKQEDKAAKAKQGSA-----------------------------ADPLGGAR 207

Query: 268 SRVQEEIKREFAAIMXXXXXXXXXXXXXXXRRVMERHG 305
            +VQEE+ REFAAIM               RRVMERHG
Sbjct: 208 GKVQEEVMREFAAIMASGTLRASEAAALAMRRVMERHG 245



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.135    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,614,042
Number of extensions: 387191
Number of successful extensions: 1817
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1813
Number of HSP's successfully gapped: 2
Length of query: 319
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 218
Effective length of database: 11,762,187
Effective search space: 2564156766
Effective search space used: 2564156766
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 156 (64.7 bits)