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Os02g0814000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF862, eukaryotic domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0331) R2 : 0.79
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.03 (0.108) R2dC : 0.276 R2C : 0.572
β3 : -1.31 (0.0805) R2dE : 0.205 R2E : 0.499
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.285 (0.0694) R2dN8 : 0.0101 R2N8 : 0.00977
σ : 0.619
deviance : 176.88
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C
peak time of C : 8.44
E
wheather : radiation
threshold : 7.223
memory length : 7
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
165.88 0.605 12.4 0.191 2.12 -1.25 -0.61 -1.62 0.288 8.49 8.13 14 -- --
172.75 0.612 12.4 0.153 2.09 -1.23 1.02 -- 0.315 8.64 7.456 7 -- --
166.66 0.601 12.4 0.18 2.12 -1.26 -- -1.3 0.279 8.46 8.114 17 -- --
175.99 0.618 12.4 0.188 2.06 -1.3 -- -- 0.301 8.48 7.33 7 -- --
306.91 0.816 12.5 0.175 -- -2.24 -- -1.36 0.371 -- 6.829 6 -- --
199.42 0.662 12.4 0.139 3.24 -- 1.23 -- 0.366 9.83 -- -- -- --
205.19 0.671 12.4 0.185 3.24 -- -- -- 0.368 9.8 -- -- -- --
312.6 0.827 12.5 0.213 -- -2.28 -- -- 0.326 -- 7.1 13 -- --
176.88 0.619 12.4 -- 2.03 -1.31 -- -- 0.285 8.44 7.223 7 -- --
831.41 1.35 12.5 0.152 -- -- -- -- 0.37 -- -- -- -- --
206.09 0.672 12.4 -- 3.24 -- -- -- 0.347 9.8 -- -- -- --
308.22 0.818 12.5 -- -- -2.28 -- -- 0.282 -- 6.207 3 -- --
832.02 1.35 12.5 -- -- -- -- -- 0.353 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 162.64 wind 7.0 720 < th dose independent rect. 7 22
4 164.13 temperature 20.0 90 > th dose independent rect. 5 12
5 164.85 temperature 15.0 30 > th dose dependent rect. 5 13
7 165.17 radiation 10.0 10 < th dose dependent rect. 7 23
9 165.89 radiation 10.0 30 < th dose dependent rect. 18 23
10 165.99 wind 9.0 720 < th dose independent rect. 1 18
17 166.42 radiation 10.0 10 < th dose dependent rect. 12 18
26 167.00 wind 7.0 270 < th dose independent rect. 15 12
27 167.02 wind 9.0 720 < th dose independent rect. 7 13
28 167.08 wind 9.0 720 < th dose independent rect. 8 11
31 167.45 radiation 10.0 10 < th dose dependent rect. 12 22
33 167.49 wind 5.0 90 < th dose independent rect. 17 12
38 167.57 radiation 10.0 10 < th dose dependent no NA NA
48 167.79 radiation 10.0 30 < th dose dependent rect. 15 23
73 168.56 wind 7.0 720 < th dose independent rect. 16 3
87 169.34 radiation 10.0 30 < th dose dependent rect. 21 23
101 170.10 temperature 10.0 720 > th dose dependent rect. 5 2
102 170.15 wind 7.0 720 < th dose independent rect. 15 22
106 170.38 wind 9.0 90 < th dose dependent rect. 17 12
110 170.50 temperature 15.0 720 > th dose independent rect. 19 22
113 170.69 radiation 10.0 10 < th dose dependent rect. 23 23
114 170.78 wind 7.0 720 < th dose independent rect. 17 18
119 171.00 radiation 10.0 10 < th dose dependent rect. 1 23
129 171.44 atmosphere 1010.0 720 < th dose independent rect. 5 2
132 171.63 temperature 20.0 720 > th dose independent rect. 17 2
136 171.73 temperature 15.0 720 > th dose independent rect. 4 3
148 172.09 humidity 50.0 720 > th dose independent rect. 12 19
163 172.81 wind 9.0 720 < th dose dependent rect. 17 2
174 173.09 temperature 10.0 10 > th dose dependent rect. 5 21
176 173.13 wind 9.0 270 < th dose dependent rect. 15 13
178 173.20 radiation 1.0 90 > th dose independent rect. 4 13
221 173.86 temperature 15.0 10 > th dose dependent rect. 20 22
224 173.90 wind 9.0 720 < th dose independent rect. 7 6
246 174.18 temperature 30.0 10 < th dose dependent rect. 2 14
261 174.39 wind 9.0 720 < th dose dependent rect. 5 2
264 174.40 radiation 20.0 720 < th dose independent rect. 5 2
271 174.51 radiation 10.0 90 < th dose independent rect. 7 22
277 174.57 wind 1.0 720 > th dose independent rect. 17 2
280 174.60 radiation 10.0 30 < th dose dependent rect. 18 16
290 174.75 temperature 15.0 720 > th dose independent rect. 20 11
294 174.77 humidity 50.0 720 > th dose dependent rect. 5 2
298 174.88 humidity 50.0 720 > th dose independent rect. 4 13
303 174.94 precipitation 0.1 720 < th dose independent rect. 5 2
304 174.94 precipitation 0.1 720 < th dose dependent rect. 5 2
321 175.17 radiation 10.0 30 < th dose dependent rect. 1 19
324 175.21 radiation 10.0 30 < th dose dependent rect. 18 14
329 175.27 radiation 1.0 30 < th dose independent rect. 18 23
331 175.30 wind 7.0 720 < th dose independent rect. 5 2
334 175.30 temperature 30.0 720 < th dose independent rect. 5 2
335 175.30 humidity 50.0 720 > th dose independent rect. 5 2
337 175.30 atmosphere 995.0 720 > th dose independent rect. 5 2
342 175.30 temperature 10.0 720 > th dose independent rect. 7 22
345 175.31 temperature 10.0 720 > th dose independent rect. 17 2
346 175.31 atmosphere 1015.0 720 < th dose independent rect. 17 2
347 175.31 radiation 30.0 720 < th dose independent rect. 17 2
357 175.44 radiation 10.0 10 < th dose dependent rect. 18 12
364 175.56 radiation 10.0 90 < th dose independent rect. 11 18
369 175.62 radiation 10.0 10 < th dose dependent rect. 3 23
393 175.88 radiation 1.0 30 < th dose independent rect. 1 19
396 175.91 wind 1.0 720 > th dose independent rect. 7 6
397 175.91 temperature 15.0 720 > th dose independent rect. 19 13
403 175.98 wind 7.0 270 > th dose dependent rect. 17 17
405 176.04 radiation 1.0 30 > th dose independent sin 1 NA
434 176.17 humidity 90.0 30 < th dose independent rect. 6 12
448 176.26 radiation 20.0 720 < th dose independent rect. 20 11
455 176.31 wind 1.0 270 > th dose independent rect. 7 12
465 176.35 radiation 1.0 30 > th dose independent rect. 15 23
478 176.48 humidity 70.0 270 > th dose independent rect. 19 12
479 176.48 radiation 10.0 90 < th dose independent rect. 9 20
482 176.52 precipitation 0.1 720 < th dose independent rect. 17 2
483 176.52 precipitation 0.1 720 < th dose dependent rect. 17 2
506 176.67 wind 9.0 720 < th dose independent rect. 21 23
511 176.70 humidity 50.0 720 > th dose independent rect. 19 22
512 176.70 temperature 10.0 10 > th dose dependent sin 4 NA
514 176.71 humidity 50.0 720 > th dose independent rect. 20 20
546 176.96 humidity 60.0 720 > th dose independent rect. 19 6
549 176.98 wind 7.0 90 > th dose dependent sin 11 NA
553 176.99 radiation 1.0 30 < th dose dependent sin 1 NA
558 177.02 radiation 40.0 720 < th dose dependent rect. 17 2
606 177.27 temperature 30.0 720 < th dose independent rect. 20 11
607 177.27 humidity 50.0 720 > th dose independent rect. 20 11
609 177.27 atmosphere 995.0 720 > th dose independent rect. 20 11
612 177.27 temperature 10.0 720 > th dose independent rect. 7 13
613 177.27 atmosphere 1015.0 720 < th dose independent rect. 7 13
614 177.28 temperature 10.0 720 > th dose independent rect. 8 11
615 177.28 atmosphere 1015.0 720 < th dose independent rect. 8 11
617 177.28 temperature 30.0 720 < th dose independent rect. 19 13
619 177.28 atmosphere 995.0 720 > th dose independent rect. 19 13
620 177.29 radiation 1.0 30 > th dose independent no NA NA
643 177.29 radiation 1.0 30 < th dose independent rect. 13 19
697 177.34 temperature 15.0 720 > th dose independent rect. 17 18
699 177.37 radiation 1.0 30 < th dose independent no NA NA
707 177.37 radiation 1.0 30 < th dose independent rect. 15 23
713 177.39 wind 9.0 10 < th dose dependent rect. 18 12
722 177.47 humidity 50.0 720 > th dose independent rect. 11 14
731 177.53 precipitation 0.1 720 < th dose independent rect. 8 11
732 177.53 precipitation 0.1 720 < th dose dependent rect. 8 11
735 177.57 radiation 1.0 30 < th dose independent rect. 15 17
765 177.67 radiation 1.0 720 > th dose independent rect. 5 2
768 177.69 precipitation 0.1 90 < th dose independent rect. 17 12
769 177.69 radiation 40.0 720 < th dose independent rect. 19 13
770 177.69 precipitation 0.1 90 < th dose dependent rect. 17 12
788 177.73 humidity 50.0 720 > th dose independent rect. 4 19
817 177.81 humidity 50.0 720 > th dose independent rect. 12 11
820 177.84 temperature 15.0 720 > th dose independent rect. 23 6
822 177.85 wind 9.0 720 < th dose independent rect. 20 11
827 177.88 humidity 50.0 90 > th dose independent rect. 17 12
828 177.88 radiation 10.0 90 < th dose independent rect. 17 12
835 177.92 precipitation 0.1 270 < th dose independent rect. 15 12
836 177.92 precipitation 0.1 270 < th dose dependent rect. 15 12
838 177.94 wind 1.0 720 > th dose independent rect. 19 5
847 177.97 wind 9.0 720 < th dose independent rect. 19 13
856 178.00 temperature 10.0 720 > th dose independent rect. 19 6
857 178.00 temperature 30.0 720 < th dose independent rect. 19 6
859 178.00 atmosphere 995.0 720 > th dose independent rect. 19 6
860 178.00 radiation 1.0 720 < th dose independent rect. 19 6
865 178.00 temperature 10.0 720 > th dose independent rect. 1 18
866 178.00 radiation 10.0 720 < th dose dependent rect. 19 6
872 178.01 radiation 1.0 30 < th dose independent rect. 21 23
890 178.11 radiation 1.0 720 < th dose dependent rect. 23 7
894 178.13 precipitation 0.1 720 < th dose independent rect. 7 13
895 178.13 precipitation 0.1 720 < th dose dependent rect. 7 13
914 178.21 temperature 10.0 720 > th dose independent rect. 7 6
915 178.21 atmosphere 995.0 720 > th dose independent rect. 7 6
916 178.21 atmosphere 1015.0 720 < th dose independent rect. 7 6
917 178.21 temperature 10.0 720 > th dose independent rect. 13 18
919 178.22 radiation 1.0 30 < th dose independent rect. 18 20
929 178.28 humidity 50.0 720 > th dose independent rect. 12 5
933 178.29 radiation 1.0 30 < th dose independent sin 1 NA
941 178.33 radiation 30.0 90 < th dose dependent rect. 17 12
955 178.40 radiation 1.0 30 < th dose independent rect. 18 14
965 178.45 humidity 90.0 30 < th dose independent rect. 20 22
994 178.60 wind 7.0 720 < th dose independent sin 20 NA