BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0814000 Os02g0814000|AK060071
(252 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07090.1 | chr3:2243153-2244476 REVERSE LENGTH=266 320 6e-88
AT4G17486.1 | chr4:9749992-9751201 REVERSE LENGTH=225 60 1e-09
AT5G25170.1 | chr5:8693257-8694438 FORWARD LENGTH=219 59 2e-09
AT5G47310.1 | chr5:19201325-19202674 FORWARD LENGTH=246 59 3e-09
AT4G25680.1 | chr4:13088425-13089952 FORWARD LENGTH=253 59 3e-09
AT1G47740.1 | chr1:17567903-17569035 FORWARD LENGTH=280 58 5e-09
AT4G25660.1 | chr4:13083677-13084989 FORWARD LENGTH=256 57 9e-09
AT2G25190.1 | chr2:10734187-10735426 FORWARD LENGTH=241 56 2e-08
AT4G31980.1 | chr4:15464905-15469204 FORWARD LENGTH=681 55 4e-08
>AT3G07090.1 | chr3:2243153-2244476 REVERSE LENGTH=266
Length = 265
Score = 320 bits (819), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 156/260 (60%), Positives = 190/260 (73%), Gaps = 14/260 (5%)
Query: 1 MAEEGYKVVLNVYDLSNGLARQLSTSFLGKPIEAIWHTGVVVYGNEYFFGGGIQSLAAGR 60
MAEE +KV LNVYDLS GLARQLS S LGK IE +WHTG+VVYGNEYFFGGGIQ L GR
Sbjct: 1 MAEEAHKVTLNVYDLSQGLARQLSQSLLGKVIEGVWHTGIVVYGNEYFFGGGIQHLPVGR 60
Query: 61 TPYGRPVRVVEMGETHIPREVFEDYLRDISPRYTAETYRLLSHNCNNFSNEVAQFLVGAG 120
TPYG P+R +E+G +H+P++VFE YL +ISPRYTAE+Y LL+HNCNNFSNEVAQFLVG G
Sbjct: 61 TPYGTPIRTIELGLSHVPKDVFEMYLEEISPRYTAESYNLLTHNCNNFSNEVAQFLVGKG 120
Query: 121 IPDYILNLPAEVMSSPMGPLIMPMIQNLESTLRTNAAPQATQFXXXXXXXXXXXQNK--- 177
IPDYIL LP +V++SPMG LIMPM+Q LE+TL+ A PQ QF ++
Sbjct: 121 IPDYILQLPNDVLNSPMGGLIMPMLQGLETTLKAGAVPQVPQFRPQPQPFGAFSKDDGPQ 180
Query: 178 ----PG-EGSSSSKQEDKAAKAKQGSAA------DPLGGARGKVQEEVMREFAAIMASGT 226
P E + +S +K Q SA+ DPLG AR K+QEE+ EFAA+MA GT
Sbjct: 181 IVIAPKLEAAETSTATEKVPPVIQPSASKEKVKDDPLGDARAKIQEEITSEFAALMAQGT 240
Query: 227 LRASEAAALAMRRVMERHGN 246
LRASEAAA+A +RVM+++G+
Sbjct: 241 LRASEAAAMATKRVMQKYGH 260
>AT4G17486.1 | chr4:9749992-9751201 REVERSE LENGTH=225
Length = 224
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 8 VVLNVYDLSNGLARQLSTSFLGKPIEAIWHTGVVVYGNEYFFGG------GIQSLAAGRT 61
V LNVYDL+ + L +G I+H+G+ + EY +G G+ +
Sbjct: 28 VYLNVYDLT-PVNNYLYWFGIG-----IFHSGIEAHNLEYCYGAHEYPTSGVYEVEPRNC 81
Query: 62 PYGRPVRVVEMGETHIPREVFEDYLRDISPRYTAETYRLLSHNCNNFSNEVAQFLVGAGI 121
P R V +G T + R F Y+ +S +Y +TY L++ NCN+F+ EV L G I
Sbjct: 82 PGFIFRRSVLLGTTSMSRSDFRSYMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPI 141
Query: 122 PDYI 125
P +I
Sbjct: 142 PGWI 145
>AT5G25170.1 | chr5:8693257-8694438 FORWARD LENGTH=219
Length = 218
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 8 VVLNVYDLS--NGLARQLSTSFLGKPIEAIWHTGVVVYGNEYFFGG------GIQSLAAG 59
V LNVYDL+ NG A L LG I+H+GV V+G EY FG GI +
Sbjct: 20 VYLNVYDLTPINGYAYWLG---LG-----IYHSGVEVHGVEYGFGAHDHSTTGIFEVEPK 71
Query: 60 RTPYGRPVRVVEMGETHIPREVFEDYLRDISPRYTAETYRLLSHNCNNFSNEVAQFLVGA 119
+ P + + +G T + E ++ ++ Y+ +Y L++ NCN+F N+V L
Sbjct: 72 QCPGFTFRKSILIGRTDLDPENVRVFMEKLAEEYSGNSYHLITKNCNHFCNDVCVQLTRR 131
Query: 120 GIPDYILNL 128
IP ++ L
Sbjct: 132 SIPSWVNRL 140
>AT5G47310.1 | chr5:19201325-19202674 FORWARD LENGTH=246
Length = 245
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 12/124 (9%)
Query: 8 VVLNVYDLSNGLARQLSTSFLGKPIEAIWHTGVVVYGNEYFFGG------GIQSLAAGRT 61
V LNVYDL+ + L LG I+H+G+ +G EY +G G+ +
Sbjct: 30 VYLNVYDLT-PVNNYLYWFGLG-----IFHSGIEAHGFEYGYGAHEYSSSGVFEVEPRSC 83
Query: 62 PYGRPVRVVEMGETHIPREVFEDYLRDISPRYTAETYRLLSHNCNNFSNEVAQFLVGAGI 121
P R V +G T + R F ++ +S +Y +TY L++ NCN+F+ EV + G I
Sbjct: 84 PGFIFRRSVLLGTTSMSRSDFRSFMEKLSRKYHGDTYHLIAKNCNHFTEEVCLQVTGKPI 143
Query: 122 PDYI 125
P +I
Sbjct: 144 PGWI 147
>AT4G25680.1 | chr4:13088425-13089952 FORWARD LENGTH=253
Length = 252
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 7 KVVLNVYDLSNGLARQLSTSFL--------GKPIEAIWHTGVVVYGNEYF------FGGG 52
+VVL++YD++N + + + + + G + I+H+ + VYGN+ + G G
Sbjct: 3 EVVLHIYDVTNSGSEKTNNTIVQINRFFKDGIGLGGIFHSAIQVYGNDEWSYGYCELGTG 62
Query: 53 IQSLAAGRTPYGRPVRVVEMGETHIPREVFEDYLRDISPRYTAETYRLLSHNCNNFSNEV 112
+ S +G+ P + +G+T + LR++S + TY LLS NCN+F + +
Sbjct: 63 VFSCPSGKNPMYTYREKIVLGKTDCTIFMVNQMLRELSREWPGHTYDLLSKNCNHFCDVL 122
Query: 113 AQFLVGAGIPDYI 125
L IP ++
Sbjct: 123 CDRLGVPKIPGWV 135
>AT1G47740.1 | chr1:17567903-17569035 FORWARD LENGTH=280
Length = 279
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 8 VVLNVYDLS--NGLARQLSTSFLGKPIEAIWHTGVVVYGNEYFFGG------GIQSLAAG 59
V LNVYDL+ NG + + LG I+H+GV V+G EY FG G+ +
Sbjct: 71 VYLNVYDLTPINGY---IYWAGLG-----IFHSGVEVHGVEYAFGAHDYATSGVFEVEPR 122
Query: 60 RTPYGRPVRVVEMGETHIPREVFEDYLRDISPRYTAETYRLLSHNCNNFSNEVAQFLVGA 119
+ P + + + +G T++ +++ D++ Y Y L+ NCN+F +V L G
Sbjct: 123 QCPGFKFKKSIFIGTTNLNPTQVREFMEDMACSYYGNMYHLIVKNCNHFCQDVCYKLTGK 182
Query: 120 GIPDYILNL 128
IP ++ L
Sbjct: 183 KIPKWVNRL 191
>AT4G25660.1 | chr4:13083677-13084989 FORWARD LENGTH=256
Length = 255
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 7 KVVLNVYDLSNGLARQLSTSFL--------GKPIEAIWHTGVVVYGNEYFF------GGG 52
+VVL++YD++N + + + + + G + I+H+ + VYGN+ + G G
Sbjct: 3 EVVLHIYDVTNSGSEKTNNTIVQINRFFKDGIGLGGIFHSAIQVYGNDEWSYGYCEQGTG 62
Query: 53 IQSLAAGRTPYGRPVRVVEMGETHIPREVFEDYLRDISPRYTAETYRLLSHNCNNFSNEV 112
+ S +G+ P + +G+T + LR++S + TY LLS NCN+F + +
Sbjct: 63 VFSCPSGKNPMYTYREKIVLGKTDCTIFMVNQILRELSREWPGHTYDLLSKNCNHFCDVL 122
Query: 113 AQFLVGAGIPDYI 125
L IP ++
Sbjct: 123 CDRLGVPKIPGWV 135
>AT2G25190.1 | chr2:10734187-10735426 FORWARD LENGTH=241
Length = 240
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 8 VVLNVYDLS--NGLARQLSTSFLGKPIEAIWHTGVVVYGNEYFFGG------GIQSLAAG 59
V LNVYDL+ N L LG ++H+GV V+G EY FG GI +
Sbjct: 19 VYLNVYDLTPMNAYGYWLG---LG-----VFHSGVEVHGVEYAFGAHESSSTGIFEVEPK 70
Query: 60 RTPYGRPVRVVEMGETHIPREVFEDYLRDISPRYTAETYRLLSHNCNNFSNEVAQFLVGA 119
+ P + + +G+T + + ++ ++ Y Y L++ NCN+F NEV L
Sbjct: 71 KCPGFTFRKSILVGKTDLVAKEVRVFMEKLAEEYQGNKYHLITRNCNHFCNEVCLKLAQK 130
Query: 120 GIPDYILNL 128
IP ++ L
Sbjct: 131 SIPRWVNRL 139
>AT4G31980.1 | chr4:15464905-15469204 FORWARD LENGTH=681
Length = 680
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Query: 8 VVLNVYDLSNGLARQLSTSFLGKPIEAIWHTGVVVYGNEYFFGG------GIQSLAAGRT 61
V LNVYDL+ + +LG I+H+G+ V+G EY +G GI + +
Sbjct: 19 VYLNVYDLT---PMNVYGYWLGI---GIYHSGLEVHGVEYGYGAHEKSSSGIFEVEPKKC 72
Query: 62 PYGRPVRVVEMGETHIPREVFEDYLRDISPRYTAETYRLLSHNCNNFSNEVAQFLVGAGI 121
P + + +GET + + ++ +S Y Y L++ NCN+F N V+ L I
Sbjct: 73 PGFTFRKSILVGETEMKAKEVRSFMEKLSEEYQGNKYHLITRNCNHFCNHVSLKLTHKSI 132
Query: 122 PDYI 125
P ++
Sbjct: 133 PSWV 136
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.315 0.131 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,760,958
Number of extensions: 185478
Number of successful extensions: 501
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 494
Number of HSP's successfully gapped: 9
Length of query: 252
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 156
Effective length of database: 8,474,633
Effective search space: 1322042748
Effective search space used: 1322042748
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 110 (47.0 bits)