Os10g0472400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF862, eukaryotic domain containing protein.
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Os10g0472400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF862, eukaryotic domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 40.71 | 0.3 | 10.6 | -1.22 | 0.794 | 0.517 | -0.107 | -0.616 | -0.231 | 9.18 | 81.97 | 1278 | -- | -- |
| 41.16 | 0.299 | 10.6 | -1.17 | 0.817 | 0.483 | -0.0423 | -- | -0.224 | 9.23 | 83.84 | 1230 | -- | -- |
| 40.74 | 0.297 | 10.6 | -1.23 | 0.794 | 0.517 | -- | -0.599 | -0.231 | 9.16 | 82 | 1278 | -- | -- |
| 41.16 | 0.299 | 10.6 | -1.17 | 0.808 | 0.476 | -- | -- | -0.224 | 9.19 | 83.32 | 1240 | -- | -- |
| 74.24 | 0.401 | 10.6 | -1.23 | -- | 0.486 | -- | -0.82 | -0.235 | -- | 85.87 | 1462 | -- | -- |
| 46.11 | 0.318 | 10.6 | -1.1 | 0.768 | -- | -0.0578 | -- | -0.234 | 8.84 | -- | -- | -- | -- |
| 46.12 | 0.318 | 10.6 | -1.1 | 0.768 | -- | -- | -- | -0.234 | 8.82 | -- | -- | -- | -- |
| 75.22 | 0.404 | 10.6 | -1.15 | -- | 0.422 | -- | -- | -0.224 | -- | 86.51 | 1452 | -- | -- |
| 75.13 | 0.404 | 10.6 | -- | 0.793 | 0.378 | -- | -- | -0.123 | 9.22 | 110.7 | 1260 | -- | -- |
| 79.71 | 0.417 | 10.6 | -1.1 | -- | -- | -- | -- | -0.229 | -- | -- | -- | -- | -- |
| 77.95 | 0.413 | 10.6 | -- | 0.766 | -- | -- | -- | -0.112 | 8.93 | -- | -- | -- | -- |
| 108.72 | 0.486 | 10.6 | -- | -- | 0.336 | -- | -- | -0.116 | -- | 94 | 1488 | -- | -- |
| 111.54 | 0.493 | 10.6 | -- | -- | -- | -- | -- | -0.107 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.50 | atmosphere | 1005 | 10 | < th | dose dependent | rect. | 24 | 8 |
| 3 | 38.59 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 18 | 7 |
| 6 | 38.64 | radiation | 10 | 1440 | < th | dose dependent | rect. | 12 | 5 |
| 11 | 38.68 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 24 | 7 |
| 14 | 38.71 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 17 | 38.74 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 9 |
| 19 | 38.77 | humidity | 90 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 25 | 38.80 | atmosphere | 1005 | 270 | < th | dose independent | rect. | 21 | 8 |
| 40 | 38.91 | radiation | 10 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 43 | 38.92 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 46 | 38.92 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 63 | 39.03 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 17 |
| 77 | 39.05 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 125 | 39.17 | atmosphere | 1010 | 270 | < th | dose dependent | rect. | 21 | 9 |
| 132 | 39.21 | atmosphere | 1005 | 720 | < th | dose independent | rect. | 19 | 2 |
| 139 | 39.24 | humidity | 90 | 720 | < th | dose independent | rect. | 20 | 3 |
| 141 | 39.24 | radiation | 10 | 1440 | < th | dose dependent | sin | 19 | NA |
| 147 | 39.27 | humidity | 90 | 720 | > th | dose independent | rect. | 20 | 3 |
| 168 | 39.33 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 193 | 39.44 | humidity | 50 | 720 | > th | dose dependent | sin | 15 | NA |
| 234 | 39.58 | atmosphere | 1010 | 10 | < th | dose dependent | sin | 9 | NA |
| 321 | 39.74 | radiation | 1 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 322 | 39.74 | radiation | 10 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 355 | 39.81 | atmosphere | 1005 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 432 | 39.96 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 440 | 39.98 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 498 | 40.06 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 2 |
| 529 | 40.09 | atmosphere | 1005 | 270 | < th | dose independent | sin | 11 | NA |
| 586 | 40.15 | atmosphere | 1005 | 720 | < th | dose independent | sin | 14 | NA |
| 617 | 40.18 | humidity | 80 | 1440 | > th | dose independent | rect. | 4 | 12 |
| 623 | 40.19 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 656 | 40.22 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 10 |
| 682 | 40.24 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 3 |
| 691 | 40.25 | humidity | 80 | 1440 | > th | dose independent | rect. | 12 | 2 |
| 693 | 40.25 | radiation | 10 | 1440 | < th | dose independent | rect. | 13 | 4 |
| 705 | 40.26 | humidity | 80 | 1440 | < th | dose independent | rect. | 5 | 11 |
| 706 | 40.26 | humidity | 80 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 716 | 40.27 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 727 | 40.28 | wind | 1 | 90 | < th | dose independent | rect. | 1 | 4 |
| 751 | 40.30 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 8 |
| 752 | 40.30 | humidity | 80 | 1440 | > th | dose independent | rect. | 24 | 17 |
| 761 | 40.31 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 769 | 40.31 | humidity | 50 | 30 | > th | dose dependent | rect. | 12 | 16 |
| 770 | 40.32 | radiation | 10 | 1440 | > th | dose independent | sin | 20 | NA |
| 878 | 40.39 | temperature | 20 | 10 | > th | dose independent | rect. | 1 | 5 |
| 888 | 40.40 | humidity | 80 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 889 | 40.40 | humidity | 60 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 902 | 40.41 | humidity | 70 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 917 | 40.42 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 6 |
| 967 | 40.47 | wind | 1 | 270 | < th | dose independent | rect. | 23 | 3 |
| 980 | 40.48 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 985 | 40.48 | temperature | 25 | 30 | < th | dose independent | rect. | 13 | 17 |
| 986 | 40.48 | radiation | 1 | 90 | < th | dose independent | rect. | 19 | 23 |