BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0430600 Os10g0430600|AK069549
         (261 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0430600  Conserved hypothetical protein                      495   e-140
Os10g0430700  Conserved hypothetical protein                      323   7e-89
Os10g0430800  Conserved hypothetical protein                      297   6e-81

>Os10g0430600 Conserved hypothetical protein
          Length = 261

 Score =  495 bits (1275), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 244/261 (93%), Positives = 244/261 (93%)

Query: 1   MVMLEEFAAVLRGQETPPVFLDLEESLRAKGDMTLREEATLKVLKVVATLGKAISTGAIA 60
           MVMLEEFAAVLRGQETPPVFLDLEESLRAKGDMTLREEATLKVLKVVATLGKAISTGAIA
Sbjct: 1   MVMLEEFAAVLRGQETPPVFLDLEESLRAKGDMTLREEATLKVLKVVATLGKAISTGAIA 60

Query: 61  AVGYYVPGIVGAKFGEPSLPRLPRFAMAAVTSWFAGKVMYYAILQGSTEFILKHGEERMK 120
           AVGYYVPGIVGAKFGEPSLPRLPRFAMAAVTSWFAGKVMYYAILQGSTEFILKHGEERMK
Sbjct: 61  AVGYYVPGIVGAKFGEPSLPRLPRFAMAAVTSWFAGKVMYYAILQGSTEFILKHGEERMK 120

Query: 121 MELSNIILNKHSDDKTLVEAVKTQFFAEHLFSDQYQDRTLFRWHLRRTYVDSAFMERVKE 180
           MELSNIILNKHSDDKTLVEAVKTQFFAEHLFSDQYQDRTLFRWHLRRTYVDSAFMERVKE
Sbjct: 121 MELSNIILNKHSDDKTLVEAVKTQFFAEHLFSDQYQDRTLFRWHLRRTYVDSAFMERVKE 180

Query: 181 IEVKSSNDGPGLISGQRIISTRPFGDLMEDPLACILGSPDSNMESNKSAEHTGTIVKXXX 240
           IEVKSSNDGPGLISGQRIISTRPFGDLMEDPLACILGSPDSNMESNKSAEHTGTIVK   
Sbjct: 181 IEVKSSNDGPGLISGQRIISTRPFGDLMEDPLACILGSPDSNMESNKSAEHTGTIVKRRE 240

Query: 241 XXXXXXXXXXXXXXADKFSAL 261
                         ADKFSAL
Sbjct: 241 VRAHRRSHRHHHRHADKFSAL 261



>Os10g0430700 Conserved hypothetical protein
          Length = 268

 Score =  323 bits (828), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 165/262 (62%), Positives = 188/262 (71%), Gaps = 6/262 (2%)

Query: 4   LEEFAAVLRGQETPPVFLDLEESLRAKGDMTLREEATLKVLKVVATLGKAISTGAIAAVG 63
           L+E   V RG+   PV LDLEESL AKG+MTL EE T++V K+ A++ K  +T A  A  
Sbjct: 9   LKEIFDVARGK-VNPVILDLEESLLAKGNMTLEEEVTIRVSKMTASVFKVFATAAFGASS 67

Query: 64  YYVPGIVGAKFGEPSLPRLPRFAMAAVTSWFAGKVMYYAILQGSTEFILKHGEERMKMEL 123
           YY  G+ G K GEP +PR PR  ++   +WF GK +YY  L+   EFILK GEERMKMEL
Sbjct: 68  YYALGL-GPKIGEPPIPRFPRIGVSTGIAWFGGKFVYYTALRAGAEFILKRGEERMKMEL 126

Query: 124 SNIILNKHSDDKTLVEAVKTQFFAEHLFSDQYQDRTLFRWHLRRTYVDSAFMERVKEIEV 183
           +NIILNKHSD+KTLVEAVK  FFAEHLFSDQYQDR LFRWHLR TYVDSAFMERVKEIEV
Sbjct: 127 ANIILNKHSDEKTLVEAVKENFFAEHLFSDQYQDRQLFRWHLRNTYVDSAFMERVKEIEV 186

Query: 184 KSSNDGPGLISGQRIISTRPFGDLMEDPLACILGSPDSNMESNKSAEHTGTIVKXXXXXX 243
           K+S+DG G ISG R  +TR FGDLMEDPLACILGS DSN++SNKSAEHTGT VK      
Sbjct: 187 KNSDDGSGSISGHRTTNTRSFGDLMEDPLACILGSSDSNIQSNKSAEHTGTTVKRREVRA 246

Query: 244 ----XXXXXXXXXXXADKFSAL 261
                          ADKFSAL
Sbjct: 247 HRRSHRHHHHHHHRHADKFSAL 268



>Os10g0430800 Conserved hypothetical protein
          Length = 277

 Score =  297 bits (760), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 156/235 (66%), Positives = 180/235 (76%), Gaps = 1/235 (0%)

Query: 3   MLEEFAAVLRGQETPPVFLDLEESLRAKGDMTLREEATLKVLKVVATLGKAISTGAIAAV 62
           +L+E +A+LRG+ETP V LDLEESLRAKGDMT  EE  +   KV A L KA +T   A V
Sbjct: 8   VLKEVSALLRGKETP-VILDLEESLRAKGDMTQGEEVKIYASKVTAVLCKAFATATSALV 66

Query: 63  GYYVPGIVGAKFGEPSLPRLPRFAMAAVTSWFAGKVMYYAILQGSTEFILKHGEERMKME 122
           GY+V G+     G P LPR+PR  MAA ++W  GK  YY  LQ S  FIL+ GEERMKME
Sbjct: 67  GYHVLGVGAKLLGNPPLPRIPRIGMAAGSAWIVGKFAYYTALQASPIFILEGGEERMKME 126

Query: 123 LSNIILNKHSDDKTLVEAVKTQFFAEHLFSDQYQDRTLFRWHLRRTYVDSAFMERVKEIE 182
           L+NIIL KH+D+KTLVEAVK  FFAEHLFSDQYQD  LFRW LR TYVDS FMERVKEIE
Sbjct: 127 LANIILTKHNDEKTLVEAVKQHFFAEHLFSDQYQDMPLFRWRLRHTYVDSTFMERVKEIE 186

Query: 183 VKSSNDGPGLISGQRIISTRPFGDLMEDPLACILGSPDSNMESNKSAEHTGTIVK 237
           VK+S++G G ISG R  +TR FGDLMEDPLACILGSPD ++E+ KSAE+TGTIVK
Sbjct: 187 VKNSSNGSGSISGHRTTNTRSFGDLMEDPLACILGSPDGDIENKKSAENTGTIVK 241



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.134    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,624,368
Number of extensions: 285440
Number of successful extensions: 723
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 721
Number of HSP's successfully gapped: 3
Length of query: 261
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 162
Effective length of database: 11,866,615
Effective search space: 1922391630
Effective search space used: 1922391630
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)