Os10g0430600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0430600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.75 | 0.521 | 6.21 | -0.957 | 0.534 | 1.7 | -0.949 | -0.0249 | -0.276 | 22.2 | 22.07 | 91 | -- | -- |
| 122.75 | 0.516 | 6.21 | -0.952 | 0.533 | 1.7 | -0.947 | -- | -0.274 | 22.2 | 22.08 | 91 | -- | -- |
| 125.77 | 0.522 | 6.2 | -0.839 | 0.553 | 1.74 | -- | 0.553 | -0.26 | 22.8 | 22.05 | 89 | -- | -- |
| 126 | 0.523 | 6.21 | -0.945 | 0.55 | 1.8 | -- | -- | -0.292 | 22.9 | 22.08 | 90 | -- | -- |
| 136.88 | 0.545 | 6.18 | -0.837 | -- | 1.57 | -- | 0.19 | -0.244 | -- | 21.9 | 255 | -- | -- |
| 178 | 0.625 | 6.15 | -0.574 | 0.714 | -- | -0.872 | -- | 0.004 | 18.7 | -- | -- | -- | -- |
| 179.73 | 0.628 | 6.15 | -0.558 | 0.716 | -- | -- | -- | 0.00269 | 18.4 | -- | -- | -- | -- |
| 136.82 | 0.545 | 6.19 | -0.9 | -- | 1.61 | -- | -- | -0.258 | -- | 21.82 | 261 | -- | -- |
| 147.59 | 0.566 | 6.18 | -- | 0.493 | 1.55 | -- | -- | -0.151 | 22 | 22.39 | 101 | -- | -- |
| 206.36 | 0.671 | 6.14 | -0.576 | -- | -- | -- | -- | -0.0124 | -- | -- | -- | -- | -- |
| 187.92 | 0.641 | 6.13 | -- | 0.723 | -- | -- | -- | 0.0648 | 18.4 | -- | -- | -- | -- |
| 157.12 | 0.584 | 6.16 | -- | -- | 1.43 | -- | -- | -0.123 | -- | 22.46 | 252 | -- | -- |
| 215.12 | 0.685 | 6.12 | -- | -- | -- | -- | -- | 0.0515 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 4 | 123.36 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 11 | 124.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 22 |
| 12 | 124.46 | temperature | 20 | 270 | > th | dose dependent | sin | 3 | NA |
| 13 | 124.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 16 | 124.73 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 18 | 124.87 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 37 | 125.49 | temperature | 20 | 90 | > th | dose dependent | sin | 0 | NA |
| 53 | 126.11 | temperature | 20 | 90 | > th | dose dependent | no | NA | NA |
| 84 | 126.94 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 100 | 127.19 | temperature | 30 | 90 | < th | dose dependent | sin | 22 | NA |
| 130 | 127.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 142 | 127.72 | temperature | 30 | 10 | < th | dose dependent | sin | 21 | NA |
| 177 | 128.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 15 |
| 186 | 128.13 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 23 |
| 192 | 128.15 | temperature | 30 | 270 | < th | dose dependent | sin | 1 | NA |
| 278 | 128.57 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 317 | 128.79 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 319 | 128.79 | temperature | 25 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 457 | 129.57 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 20 |
| 485 | 129.74 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 565 | 130.20 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 567 | 130.22 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 589 | 130.31 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 8 |
| 731 | 131.14 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 14 |
| 779 | 131.45 | temperature | 25 | 270 | > th | dose independent | sin | 0 | NA |
| 780 | 131.46 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 799 | 131.60 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 884 | 132.06 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 12 |
| 902 | 132.17 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 13 |
| 911 | 132.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |