Os10g0430800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0430800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 55.8 | 0.351 | 7.74 | -0.672 | 0.589 | 0.521 | -0.723 | -1.25 | -0.0836 | 9.65 | 17.71 | 16 | -- | -- |
| 59 | 0.358 | 7.74 | -0.655 | 0.648 | 0.577 | 0.509 | -- | -0.0848 | 10.4 | 16.12 | 14 | -- | -- |
| 56.27 | 0.349 | 7.73 | -0.651 | 0.653 | 0.583 | -- | -0.804 | -0.0829 | 9.98 | 16.21 | 11 | -- | -- |
| 59.93 | 0.361 | 7.74 | -0.626 | 0.649 | 0.57 | -- | -- | -0.084 | 10.2 | 16.12 | 15 | -- | -- |
| 66.95 | 0.381 | 7.74 | -0.642 | -- | 0.305 | -- | -1.39 | -0.0234 | -- | 15.34 | 315 | -- | -- |
| 68.84 | 0.389 | 7.75 | -0.67 | 0.316 | -- | -1.1 | -- | -0.0908 | 5.37 | -- | -- | -- | -- |
| 71.07 | 0.395 | 7.75 | -0.67 | 0.332 | -- | -- | -- | -0.0848 | 6.68 | -- | -- | -- | -- |
| 66.02 | 0.378 | 7.73 | -0.793 | -- | 0.493 | -- | -- | -0.0014 | -- | 19.69 | 905 | -- | -- |
| 70.28 | 0.39 | 7.72 | -- | 0.667 | 0.583 | -- | -- | -0.0121 | 10.2 | 16.03 | 15 | -- | -- |
| 76.81 | 0.41 | 7.75 | -0.662 | -- | -- | -- | -- | -0.0782 | -- | -- | -- | -- | -- |
| 82.9 | 0.426 | 7.73 | -- | 0.324 | -- | -- | -- | -0.0102 | 6.8 | -- | -- | -- | -- |
| 74.03 | 0.401 | 7.72 | -- | -- | 0.595 | -- | -- | 0.0851 | -- | 10.01 | 945 | -- | -- |
| 88.38 | 0.439 | 7.74 | -- | -- | -- | -- | -- | -0.00469 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.94 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 2 | 44.27 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 9 | 45.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 12 | 46.00 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 4 |
| 13 | 46.22 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 14 | 46.22 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 16 | 46.28 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 27 | 46.52 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 29 | 46.60 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 30 | 46.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 32 | 46.60 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 33 | 46.60 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 36 | 46.60 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 37 | 46.60 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 39 | 46.60 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 42 | 46.60 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 46 | 46.64 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 47 | 46.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 55 | 46.78 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 65 | 47.01 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 75 | 47.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 77 | 47.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 82 | 47.18 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 100 | 47.36 | humidity | 80.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 186 | 47.89 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 187 | 47.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 190 | 47.89 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 192 | 47.89 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 193 | 47.89 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 194 | 47.89 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 20 |
| 203 | 47.93 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 222 | 48.05 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 19 |
| 243 | 48.14 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 247 | 48.17 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 256 | 48.22 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 260 | 48.25 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 15 |
| 288 | 48.42 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 307 | 48.51 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 20 |
| 311 | 48.55 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 317 | 48.57 | radiation | 1.0 | 270 | < th | dose independent | sin | 2 | NA |
| 322 | 48.59 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 340 | 48.62 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 4 | 16 |
| 354 | 48.74 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 355 | 48.74 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 369 | 48.81 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 16 |
| 424 | 49.03 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 15 |
| 425 | 49.03 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 479 | 49.11 | radiation | 10.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 514 | 49.23 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 515 | 49.23 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 540 | 49.32 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 545 | 49.35 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 548 | 49.35 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 553 | 49.36 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 5 | 9 |
| 577 | 49.42 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 16 |
| 592 | 49.49 | wind | 9.0 | 270 | < th | dose dependent | rect. | 17 | 9 |
| 595 | 49.50 | wind | 9.0 | 90 | < th | dose dependent | rect. | 20 | 8 |
| 605 | 49.55 | radiation | 10.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 627 | 49.60 | radiation | 1.0 | 270 | > th | dose independent | sin | 2 | NA |
| 633 | 49.60 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 696 | 49.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 697 | 49.74 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 701 | 49.74 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 702 | 49.74 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 703 | 49.74 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 708 | 49.76 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 710 | 49.76 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 814 | 50.03 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 20 | 8 |
| 832 | 50.09 | wind | 5.0 | 90 | < th | dose independent | rect. | 20 | 8 |
| 862 | 50.18 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 874 | 50.21 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 11 |
| 875 | 50.21 | radiation | 30.0 | 270 | < th | dose independent | rect. | 15 | 16 |
| 920 | 50.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 923 | 50.31 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 927 | 50.31 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 933 | 50.31 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 934 | 50.31 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 947 | 50.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 16 |
| 961 | 50.34 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 15 |