BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0363700 Os10g0363700|J090026E10
         (111 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0363700  Hypothetical protein                                229   2e-61
Os03g0107400  Prefoldin domain containing protein                 106   4e-24
Os10g0547000  Protein kinase PKN/PRK1, effector domain conta...    93   4e-20
Os10g0504600  Chorion 2 family protein                             91   2e-19

>Os10g0363700 Hypothetical protein
          Length = 111

 Score =  229 bits (585), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 111/111 (100%), Positives = 111/111 (100%)

Query: 1   IPSTGWDKLFLSFISADTGKVSAKTNKANVRNGSCKWPDPIYEATRLLQDSRTKTYDDKL 60
           IPSTGWDKLFLSFISADTGKVSAKTNKANVRNGSCKWPDPIYEATRLLQDSRTKTYDDKL
Sbjct: 1   IPSTGWDKLFLSFISADTGKVSAKTNKANVRNGSCKWPDPIYEATRLLQDSRTKTYDDKL 60

Query: 61  YKIVVAMGTSRSSILGELDVNLAEFAEALKPVSIALPLRGCEFGTILHVWF 111
           YKIVVAMGTSRSSILGELDVNLAEFAEALKPVSIALPLRGCEFGTILHVWF
Sbjct: 61  YKIVVAMGTSRSSILGELDVNLAEFAEALKPVSIALPLRGCEFGTILHVWF 111



>Os03g0107400 Prefoldin domain containing protein
          Length = 950

 Score =  106 bits (264), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 48/103 (46%), Positives = 70/103 (67%)

Query: 7   DKLFLSFISADTGKVSAKTNKANVRNGSCKWPDPIYEATRLLQDSRTKTYDDKLYKIVVA 66
           D+LFLS +S DTGK  AK+ KA  R+G C+WPD I E+    QD  +K +D+  YKIVV+
Sbjct: 34  DRLFLSIVSVDTGKTVAKSGKAAARSGICQWPDSILESIWFSQDEVSKEFDECQYKIVVS 93

Query: 67  MGTSRSSILGELDVNLAEFAEALKPVSIALPLRGCEFGTILHV 109
           +G+ +S +LGE+ +NL  F   + P +I+LPL+ C  GT+L +
Sbjct: 94  VGSIKSGVLGEIFLNLTNFLNLVDPTAISLPLKRCNSGTVLQL 136



>Os10g0547000 Protein kinase PKN/PRK1, effector domain containing protein
          Length = 1578

 Score = 93.2 bits (230), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/103 (40%), Positives = 68/103 (66%)

Query: 7   DKLFLSFISADTGKVSAKTNKANVRNGSCKWPDPIYEATRLLQDSRTKTYDDKLYKIVVA 66
           D+L LS ++ DTGK  AK+ KA   +G+C+WPD I E+    QD  ++ + +   + VV+
Sbjct: 35  DRLMLSIVAVDTGKTIAKSTKAAALSGACQWPDSILESIWFSQDQVSEEFQECQCRFVVS 94

Query: 67  MGTSRSSILGELDVNLAEFAEALKPVSIALPLRGCEFGTILHV 109
           MG++ S ILGE+ +NL  +  +L+  +I+LPL+ C+ GTIL +
Sbjct: 95  MGSTNSGILGEVFLNLTNYLSSLESTAISLPLKRCDSGTILQL 137



>Os10g0504600 Chorion 2 family protein
          Length = 982

 Score = 90.9 bits (224), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/110 (38%), Positives = 69/110 (62%), Gaps = 7/110 (6%)

Query: 1   IPSTGWDKLFLSFISADTGKVSAKTNKANVRNGSCKWPDPIYEATRLLQDSRTKTYDDKL 60
           +P  GW+ + +     D G+ +A+T  A V +G+C+WP P+YEAT+L    +     DK+
Sbjct: 30  VPEVGWEAMMVVVTPRDAGRPTARTESAQVADGACQWPAPVYEATKLPSSGK-----DKI 84

Query: 61  YKIVV-AMGTSRSSILGELDVNLAEFAEALKPVSIALPLRGCEFGTILHV 109
           Y+ +V   G++++++LGE  +NL+E+A+A KP  + LPL G   G  LHV
Sbjct: 85  YQFLVYDTGSTKAALLGEATLNLSEYADAFKPWIVTLPLSGSP-GAQLHV 133



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.135    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,430,510
Number of extensions: 113919
Number of successful extensions: 224
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 223
Number of HSP's successfully gapped: 4
Length of query: 111
Length of database: 17,035,801
Length adjustment: 78
Effective length of query: 33
Effective length of database: 12,963,109
Effective search space: 427782597
Effective search space used: 427782597
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 149 (62.0 bits)