BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0188900 Os10g0188900|AK070874
         (262 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0188900  Conserved hypothetical protein                      496   e-141
AK059182                                                          430   e-121
Os08g0101200  Conserved hypothetical protein                      349   1e-96

>Os10g0188900 Conserved hypothetical protein
          Length = 262

 Score =  496 bits (1276), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 244/262 (93%), Positives = 244/262 (93%)

Query: 1   MVKTVVGEEAQLKALEETLSASASPAQVGLVVGKLSASSDRALAYSLIPTPPTDSGAPAC 60
           MVKTVVGEEAQLKALEETLSASASPAQVGLVVGKLSASSDRALAYSLIPTPPTDSGAPAC
Sbjct: 1   MVKTVVGEEAQLKALEETLSASASPAQVGLVVGKLSASSDRALAYSLIPTPPTDSGAPAC 60

Query: 61  SLLRXXXXXXXXXXXXXXXXXXLDFDVDWVAEHARQVSRMLLGGMTVIGIYIWASEASFK 120
           SLLR                  LDFDVDWVAEHARQVSRMLLGGMTVIGIYIWASEASFK
Sbjct: 61  SLLRAAPNPKAAKAASSDASSSLDFDVDWVAEHARQVSRMLLGGMTVIGIYIWASEASFK 120

Query: 121 ATSPAVLSQVLRAVSQVAPLYGTGVDERLLIHISYSPRRWACRICDMSSGRLRPCDFKYT 180
           ATSPAVLSQVLRAVSQVAPLYGTGVDERLLIHISYSPRRWACRICDMSSGRLRPCDFKYT
Sbjct: 121 ATSPAVLSQVLRAVSQVAPLYGTGVDERLLIHISYSPRRWACRICDMSSGRLRPCDFKYT 180

Query: 181 KLLASLQTFRCTYNFEIRLPVVQAEPFKKVISKAISHLTKQVQNAKALIDGVLFLDDMDN 240
           KLLASLQTFRCTYNFEIRLPVVQAEPFKKVISKAISHLTKQVQNAKALIDGVLFLDDMDN
Sbjct: 181 KLLASLQTFRCTYNFEIRLPVVQAEPFKKVISKAISHLTKQVQNAKALIDGVLFLDDMDN 240

Query: 241 TLEGPHNVEFLVPFKNNLPAEV 262
           TLEGPHNVEFLVPFKNNLPAEV
Sbjct: 241 TLEGPHNVEFLVPFKNNLPAEV 262



>AK059182 
          Length = 244

 Score =  430 bits (1106), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 215/233 (92%), Positives = 215/233 (92%)

Query: 1   MVKTVVGEEAQLKALEETLSASASPAQVGLVVGKLSASSDRALAYSLIPTPPTDSGAPAC 60
           MVKTVVGEEAQLKALEETLSASASPAQVGLVVGKLSASSDRALAYSLIPTPPTDSGAPAC
Sbjct: 1   MVKTVVGEEAQLKALEETLSASASPAQVGLVVGKLSASSDRALAYSLIPTPPTDSGAPAC 60

Query: 61  SLLRXXXXXXXXXXXXXXXXXXLDFDVDWVAEHARQVSRMLLGGMTVIGIYIWASEASFK 120
           SLLR                  LDFDVDWVAEHARQVSRMLLGGMTVIGIYIWASEASFK
Sbjct: 61  SLLRAAPNPKAAKAASSDASSSLDFDVDWVAEHARQVSRMLLGGMTVIGIYIWASEASFK 120

Query: 121 ATSPAVLSQVLRAVSQVAPLYGTGVDERLLIHISYSPRRWACRICDMSSGRLRPCDFKYT 180
           ATSPAVLSQVLRAVSQVAPLYGTGVDERLLIHISYSPRRWACRICDMSSGRLRPCDFKYT
Sbjct: 121 ATSPAVLSQVLRAVSQVAPLYGTGVDERLLIHISYSPRRWACRICDMSSGRLRPCDFKYT 180

Query: 181 KLLASLQTFRCTYNFEIRLPVVQAEPFKKVISKAISHLTKQVQNAKALIDGVL 233
           KLLASLQTFRCTYNFEIRLPVVQAEPFKKVISKAISHLTKQVQNAKALIDGVL
Sbjct: 181 KLLASLQTFRCTYNFEIRLPVVQAEPFKKVISKAISHLTKQVQNAKALIDGVL 233



>Os08g0101200 Conserved hypothetical protein
          Length = 217

 Score =  349 bits (895), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 174/198 (87%), Positives = 178/198 (89%), Gaps = 3/198 (1%)

Query: 1   MVKTVVGEEAQLKALEETLSASASPAQVGLVVGKLSASSDRALAYSLIPTPPTDSGAPAC 60
           MVKTVVG+EAQ+KA EETLSAS SPAQVGLVVGKLSASSDRALAYSLIPTPPTDSGAPAC
Sbjct: 1   MVKTVVGDEAQVKASEETLSASTSPAQVGLVVGKLSASSDRALAYSLIPTPPTDSGAPAC 60

Query: 61  SLLRXXXXXXXXXXXXXXXXXXLDFDVDWVAEHARQVSRMLLGGMTVIGIYIWASEASFK 120
           SLLR                  LDFDVDW+AEHARQVSRMLLGGMTVIGIYIWASEASFK
Sbjct: 61  SLLRAKPAAKAASSGASSS---LDFDVDWLAEHARQVSRMLLGGMTVIGIYIWASEASFK 117

Query: 121 ATSPAVLSQVLRAVSQVAPLYGTGVDERLLIHISYSPRRWACRICDMSSGRLRPCDFKYT 180
           ATSPAVLSQVLRAVSQVAPLYGTGVDERLLIHISYSPRRWACRICDMSSGRLRPCDFKY+
Sbjct: 118 ATSPAVLSQVLRAVSQVAPLYGTGVDERLLIHISYSPRRWACRICDMSSGRLRPCDFKYS 177

Query: 181 KLLASLQTFRCTYNFEIR 198
           KLLASLQTFRCTYNFEIR
Sbjct: 178 KLLASLQTFRCTYNFEIR 195



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.134    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,121,153
Number of extensions: 293421
Number of successful extensions: 682
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 679
Number of HSP's successfully gapped: 3
Length of query: 262
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 163
Effective length of database: 11,866,615
Effective search space: 1934258245
Effective search space used: 1934258245
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)