BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os10g0170300 Os10g0170300|AK068119
         (952 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os10g0170300  Conserved hypothetical protein                     1904   0.0  
Os02g0781500  Conserved hypothetical protein                      175   1e-43

>Os10g0170300 Conserved hypothetical protein
          Length = 952

 Score = 1904 bits (4932), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 927/952 (97%), Positives = 927/952 (97%)

Query: 1   MAAPGSHTRRRAWPLLFLAVLMFHSLAIYLFTRGFLLTRTELDVHSHRDDRIGISPGCSS 60
           MAAPGSHTRRRAWPLLFLAVLMFHSLAIYLFTRGFLLTRTELDVHSHRDDRIGISPGCSS
Sbjct: 1   MAAPGSHTRRRAWPLLFLAVLMFHSLAIYLFTRGFLLTRTELDVHSHRDDRIGISPGCSS 60

Query: 61  WPPPAVDRLVIVVLDALRFDFVAPSTFFQERQPWMDKLQVLQRLAADEKTSARIFKALAD 120
           WPPPAVDRLVIVVLDALRFDFVAPSTFFQERQPWMDKLQVLQRLAADEKTSARIFKALAD
Sbjct: 61  WPPPAVDRLVIVVLDALRFDFVAPSTFFQERQPWMDKLQVLQRLAADEKTSARIFKALAD 120

Query: 121 PPTTSLQRLKALTTGGLPTFIDVGNSFGAPAIVEDNIMHQFAKNGKRVVMMGDDTWIQLY 180
           PPTTSLQRLKALTTGGLPTFIDVGNSFGAPAIVEDNIMHQFAKNGKRVVMMGDDTWIQLY
Sbjct: 121 PPTTSLQRLKALTTGGLPTFIDVGNSFGAPAIVEDNIMHQFAKNGKRVVMMGDDTWIQLY 180

Query: 181 PEHFNKSYPYPSFNVKDLDTVDNGVIEHLLPSLHKNDWDVLIAHFLGVDHAGHIFGVDST 240
           PEHFNKSYPYPSFNVKDLDTVDNGVIEHLLPSLHKNDWDVLIAHFLGVDHAGHIFGVDST
Sbjct: 181 PEHFNKSYPYPSFNVKDLDTVDNGVIEHLLPSLHKNDWDVLIAHFLGVDHAGHIFGVDST 240

Query: 241 PMIQKLEQYNRILEDVIDTLKSLSTSGGPHENTLLLVMGDHGQTLNGDHGGGTAEEVETS 300
           PMIQKLEQYNRILEDVIDTLKSLSTSGGPHENTLLLVMGDHGQTLNGDHGGGTAEEVETS
Sbjct: 241 PMIQKLEQYNRILEDVIDTLKSLSTSGGPHENTLLLVMGDHGQTLNGDHGGGTAEEVETS 300

Query: 301 LFAWSPKTPPNAVLSVLGKNLCNADLHGKEVCVSTMQQLDFAVTIAALLGIPFPFGSIGR 360
           LFAWSPKTPPNAVLSVLGKNLCNADLHGKEVCVSTMQQLDFAVTIAALLGIPFPFGSIGR
Sbjct: 301 LFAWSPKTPPNAVLSVLGKNLCNADLHGKEVCVSTMQQLDFAVTIAALLGIPFPFGSIGR 360

Query: 361 VNPELYALSAGTWDNQQIGANDCTQQNDLEAWMRRYAEALCINCWQVKRYIDRYSATSVI 420
           VNPELYALSAGTWDNQQIGANDCTQQNDLEAWMRRYAEALCINCWQVKRYIDRYSATSVI
Sbjct: 361 VNPELYALSAGTWDNQQIGANDCTQQNDLEAWMRRYAEALCINCWQVKRYIDRYSATSVI 420

Query: 421 GFRAEDLNHVADLYSKAQANWSSVLRSTCPVETSSQDELKECANKECTSSALRLQIDAYS 480
           GFRAEDLNHVADLYSKAQANWSSVLRSTCPVETSSQDELKECANKECTSSALRLQIDAYS
Sbjct: 421 GFRAEDLNHVADLYSKAQANWSSVLRSTCPVETSSQDELKECANKECTSSALRLQIDAYS 480

Query: 481 DFLESFAKLARSAWTEFDLWLMGIGLSVMILSVSTQACMLVKLNIDQISEKERASSSFIP 540
           DFLESFAKLARSAWTEFDLWLMGIGLSVMILSVSTQACMLVKLNIDQISEKERASSSFIP
Sbjct: 481 DFLESFAKLARSAWTEFDLWLMGIGLSVMILSVSTQACMLVKLNIDQISEKERASSSFIP 540

Query: 541 KNFFAFALVAIRAASFLSNSYILAEGRVANFLLATSCIASVWHSATKGKFIIEEFVFLLL 600
           KNFFAFALVAIRAASFLSNSYILAEGRVANFLLATSCIASVWHSATKGKFIIEEFVFLLL
Sbjct: 541 KNFFAFALVAIRAASFLSNSYILAEGRVANFLLATSCIASVWHSATKGKFIIEEFVFLLL 600

Query: 601 NIFIRFGIEFGMSKQISGSIISNDHPVSIICGLFGSSFCSDLMEIFPIISLTLVAYIILK 660
           NIFIRFGIEFGMSKQISGSIISNDHPVSIICGLFGSSFCSDLMEIFPIISLTLVAYIILK
Sbjct: 601 NIFIRFGIEFGMSKQISGSIISNDHPVSIICGLFGSSFCSDLMEIFPIISLTLVAYIILK 660

Query: 661 CISYAISHRFLKYSVMSGSILSYIFIAIHWASESTLLSHTKATRETGISLAPRLVYTIGG 720
           CISYAISHRFLKYSVMSGSILSYIFIAIHWASESTLLSHTKATRETGISLAPRLVYTIGG
Sbjct: 661 CISYAISHRFLKYSVMSGSILSYIFIAIHWASESTLLSHTKATRETGISLAPRLVYTIGG 720

Query: 721 LSLAISAFYRLFGSTDHLKMNERITSLSAVMLCSWSPTILILLGRQGPFVALICMTIAWC 780
           LSLAISAFYRLFGSTDHLKMNERITSLSAVMLCSWSPTILILLGRQGPFVALICMTIAWC
Sbjct: 721 LSLAISAFYRLFGSTDHLKMNERITSLSAVMLCSWSPTILILLGRQGPFVALICMTIAWC 780

Query: 781 IIKLQQKNQRELKLDKGIHAADSVSVTQWSFLAVCLFYLTGHWCTFDGLRYGAAFIGFDH 840
           IIKLQQKNQRELKLDKGIHAADSVSVTQWSFLAVCLFYLTGHWCTFDGLRYGAAFIGFDH
Sbjct: 781 IIKLQQKNQRELKLDKGIHAADSVSVTQWSFLAVCLFYLTGHWCTFDGLRYGAAFIGFDH 840

Query: 841 FHIIRQGLLLSIDTFGVSHILPVLSLPFIAICWYNSASKNSKVNDATVTRLIQVLLMYGL 900
           FHIIRQGLLLSIDTFGVSHILPVLSLPFIAICWYNSASKNSKVNDATVTRLIQVLLMYGL
Sbjct: 841 FHIIRQGLLLSIDTFGVSHILPVLSLPFIAICWYNSASKNSKVNDATVTRLIQVLLMYGL 900

Query: 901 XXXXXXXXXXXXXXXQRRHLMVWGLFAPKYVFDAIGXXXXXXXXXXASIYYS 952
                          QRRHLMVWGLFAPKYVFDAIG          ASIYYS
Sbjct: 901 ITSITTTLTIICVTIQRRHLMVWGLFAPKYVFDAIGLLLTDLLVVLASIYYS 952



>Os02g0781500 Conserved hypothetical protein
          Length = 765

 Score =  175 bits (444), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/304 (34%), Positives = 163/304 (53%), Gaps = 20/304 (6%)

Query: 63  PPAVDRLVIVVLDALRFDFVAPSTFFQERQPWMDKLQVLQRLAADEKTSARIFKALADPP 122
           PP  DRLV++V+D L  +FV         +  ++ +   Q L A  K +   + A A PP
Sbjct: 84  PPVYDRLVLMVIDGLPAEFVLGRVGKPPSKEMVESMPYTQSLLAGCKATG--YHAKAAPP 141

Query: 123 TTSLQRLKALTTGGLPTFIDVGNSFGAPAIVEDNIMHQFAKNGKRVVMMGDDTWIQLYPE 182
           T ++ RLKA+ +G +  F+DV  +F   A ++DN++ Q    G ++VM+GD+TWI+L+P+
Sbjct: 142 TVTMPRLKAMVSGAIGGFLDVAFNFNTQAFLDDNLLDQLHMIGYKLVMLGDETWIKLFPK 201

Query: 183 HFNKSYPYPSFNVKDLDTVDNGVIEHLLPSLHKNDWDVLIAHFLGVDHAGHIFGVDSTPM 242
            F +     SF VKD   VD  V  HL       DW++LI H+LG+DH GHI G  S  M
Sbjct: 202 LFWRQDGVSSFYVKDTVEVDFNVSRHLESEFAAKDWNMLILHYLGLDHVGHIGGRQSVLM 261

Query: 243 IQKLEQYNRILEDVIDTLKSLSTSGGPHENTLLLVMGDHGQTLNGDHGGGTAEEVETSLF 302
            QKL++ + ++  V + +  L  +    + TLL+V+ DHG T  G+HGG + EE + SL 
Sbjct: 262 PQKLKEMDDVIRRVHNAVSGLEDN---LDRTLLVVVSDHGMTEGGNHGGSSYEETD-SLA 317

Query: 303 AWSPKTPPNAVLSVLGKNLCNADLHGKEVCVSTMQQLDFAVTIAALLGIPFPFGSIGRVN 362
            +   +  ++  S   +N                 Q+D A T++ L G P P  +IG V 
Sbjct: 318 LFIGHSVQSSYCSPYDQN--------------EALQVDLAPTLSLLFGTPIPKNNIGVVL 363

Query: 363 PELY 366
           PE++
Sbjct: 364 PEVF 367



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.324    0.137    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 30,744,836
Number of extensions: 1260077
Number of successful extensions: 3636
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3632
Number of HSP's successfully gapped: 2
Length of query: 952
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 842
Effective length of database: 11,292,261
Effective search space: 9508083762
Effective search space used: 9508083762
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 161 (66.6 bits)