Os10g0170300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0170300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.41 | 0.383 | 7.43 | -1.48 | 0.261 | 0.584 | -0.812 | 0.021 | -0.274 | 5.12 | 21.22 | 1326 | -- | -- |
| 66.41 | 0.38 | 7.43 | -1.49 | 0.261 | 0.582 | -0.811 | -- | -0.274 | 5.13 | 21.22 | 1326 | -- | -- |
| 68.06 | 0.384 | 7.43 | -1.5 | 0.256 | 0.589 | -- | -0.0424 | -0.277 | 5.19 | 21.21 | 1324 | -- | -- |
| 68.06 | 0.384 | 7.43 | -1.49 | 0.255 | 0.591 | -- | -- | -0.274 | 5.18 | 21.2 | 1326 | -- | -- |
| 71.42 | 0.394 | 7.44 | -1.52 | -- | 0.584 | -- | -0.146 | -0.277 | -- | 21.2 | 1216 | -- | -- |
| 75.78 | 0.408 | 7.4 | -1.25 | 0.284 | -- | -0.881 | -- | -0.117 | 4.84 | -- | -- | -- | -- |
| 77.79 | 0.413 | 7.39 | -1.24 | 0.278 | -- | -- | -- | -0.112 | 4.81 | -- | -- | -- | -- |
| 71.46 | 0.394 | 7.43 | -1.49 | -- | 0.603 | -- | -- | -0.272 | -- | 21.2 | 1249 | -- | -- |
| 94.78 | 0.453 | 7.32 | -- | 0.286 | -0.794 | -- | -- | 0.208 | 5.46 | 18.47 | 33651 | -- | -- |
| 81.88 | 0.423 | 7.4 | -1.23 | -- | -- | -- | -- | -0.105 | -- | -- | -- | -- | -- |
| 118.6 | 0.509 | 7.36 | -- | 0.256 | -- | -- | -- | 0.0262 | 4.96 | -- | -- | -- | -- |
| 94.61 | 0.453 | 7.31 | -- | -- | -0.767 | -- | -- | 0.299 | -- | 22.01 | 47520 | -- | -- |
| 122.04 | 0.516 | 7.37 | -- | -- | -- | -- | -- | 0.0317 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 2 | 65.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 3 |
| 4 | 66.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 5 | 66.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 6 | 66.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 13 | 66.64 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 14 | 66.66 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 15 | 66.68 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 18 | 66.76 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 5 |
| 23 | 66.81 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 27 | 66.83 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 28 | 66.84 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 12 |
| 29 | 66.84 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 52 | 66.97 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 57 | 66.99 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 58 | 66.99 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 62 | 67.00 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 18 | 12 |
| 74 | 67.03 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 83 | 67.05 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 19 | 9 |
| 99 | 67.12 | temperature | 20.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 108 | 67.15 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 127 | 67.19 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 137 | 67.20 | wind | 9.0 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 144 | 67.22 | wind | 9.0 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 160 | 67.26 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 188 | 67.31 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 189 | 67.32 | temperature | 20.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 191 | 67.32 | wind | 9.0 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 192 | 67.32 | wind | 9.0 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 199 | 67.34 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 212 | 67.35 | wind | 9.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 213 | 67.36 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 217 | 67.36 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 238 | 67.40 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 242 | 67.41 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 244 | 67.42 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 253 | 67.43 | wind | 9.0 | 14400 | < th | dose independent | rect. | 21 | 16 |
| 254 | 67.43 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 18 |
| 271 | 67.46 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 277 | 67.46 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 23 | 14 |
| 299 | 67.50 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 12 |
| 317 | 67.53 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 319 | 67.53 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 336 | 67.57 | wind | 9.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 342 | 67.57 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 371 | 67.61 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 376 | 67.62 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 381 | 67.63 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 435 | 67.64 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 460 | 67.66 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 3 |
| 465 | 67.67 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 467 | 67.67 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 474 | 67.68 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 484 | 67.68 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 514 | 67.71 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 6 |
| 517 | 67.72 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 585 | 67.74 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 9 |
| 669 | 67.82 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 674 | 67.83 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 712 | 67.87 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 745 | 67.90 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 783 | 67.92 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 23 |
| 814 | 67.94 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 11 |
| 895 | 68.01 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 903 | 68.02 | temperature | 20.0 | 1440 | > th | dose independent | no | NA | NA |
| 912 | 68.02 | temperature | 20.0 | 720 | > th | dose independent | rect. | 3 | 21 |
| 914 | 68.02 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 959 | 68.06 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 965 | 68.06 | wind | 9.0 | 4320 | > th | dose independent | rect. | 17 | 11 |