BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0170300 Os10g0170300|AK068119
(952 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G17250.1 | chr5:5668993-5673516 REVERSE LENGTH=926 817 0.0
AT2G22530.1 | chr2:9572971-9577441 REVERSE LENGTH=959 189 6e-48
AT3G01380.1 | chr3:144288-149828 REVERSE LENGTH=994 62 1e-09
>AT5G17250.1 | chr5:5668993-5673516 REVERSE LENGTH=926
Length = 925
Score = 817 bits (2110), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/956 (46%), Positives = 596/956 (62%), Gaps = 66/956 (6%)
Query: 18 LAVLMFHSLAIYLFTRGFLLTRTELDVHSHRDDRIGISPGCSS----------------- 60
L L+ H++AI +FTRGFLLTRTEL HS D + +SP +S
Sbjct: 13 LGFLLIHAIAILIFTRGFLLTRTELPFHSTCSD-VSLSPCLASPRSNHDSSSGQSNQTQP 71
Query: 61 --WPPPAVDRLVIVVLDALRFDFVAPSTFFQERQPWMDKLQVLQRLAADEKTSARIFKAL 118
W P VDR++I+VLDALR DFVAPS FF E +PWMDKL +LQ LA +SA+IFKA
Sbjct: 72 KCWTKPVVDRVIIIVLDALRIDFVAPSAFFPEPKPWMDKLTILQTLAFANDSSAKIFKAF 131
Query: 119 ADPPTTSLQRLKALTTGGLPTFIDVGNSFGAPAIVEDNIMHQFAKNGKRVVMMGDDTWIQ 178
ADPPTTSLQRLK LTTGGLPTFID+GNSFGAPAIVEDN ++Q NGKR+VMMGDDTW Q
Sbjct: 132 ADPPTTSLQRLKGLTTGGLPTFIDIGNSFGAPAIVEDNFINQLVLNGKRLVMMGDDTWTQ 191
Query: 179 LYPEHFNKSYPYPSFNVKDLDTVDNGVIEHLLPSLHKNDWDVLIAHFLGVDHAGHIFGVD 238
L+P F KSYP+PSFNVKDLDTVDNG IEHL P+L K+DWDVLIAHFLGVDHAGHIFGVD
Sbjct: 192 LFPNQFQKSYPFPSFNVKDLDTVDNGCIEHLFPTLFKDDWDVLIAHFLGVDHAGHIFGVD 251
Query: 239 STPMIQKLEQYNRILEDVIDTLKSLSTSGGPHENTLLLVMGDHGQTLNGDHGGGTAEEVE 298
S+PMI KLEQYN +LE VI+ L+S + GG HENT+L+VMGDHGQTLNGDHGGGTAEEVE
Sbjct: 252 SSPMINKLEQYNSVLEKVINILESQAGPGGLHENTMLIVMGDHGQTLNGDHGGGTAEEVE 311
Query: 299 TSLFAWSPKTPPNAVLSVLGKNLCNADLHGKEVCVSTMQQLDFAVTIAALLGIPFPFGSI 358
T++FA S K V + C + GK++C+S ++QLDFA T++ALLGI FPFGSI
Sbjct: 312 TTMFAMSTKKHTTLVPPEFDTSSCKQNKDGKQMCISYIEQLDFAATLSALLGISFPFGSI 371
Query: 359 GRVNPELYALSAGTWDNQQIGANDCTQQNDLEAWMRRYAEALCINCWQVKRYIDRYSATS 418
G VNPELYAL + +W+ + + Q+ WM+ Y + LC+N WQVKRYID YS +S
Sbjct: 372 GHVNPELYALGSSSWNLDKSDLGNFGTQSAANEWMKHYVDVLCVNAWQVKRYIDVYSNSS 431
Query: 419 VIGFRAEDLNHVADLYSKAQANWSSVLRSTCPVETSSQDELKECANKECTSSALRLQIDA 478
V+GF ++D++ ++DLYS A+ NWS+ ++ ++ + D + S+ L+ QI
Sbjct: 432 VVGFSSDDMSRISDLYSAAEQNWSNSVKHIL-MDRNGDDGSTD------ISALLKEQIAE 484
Query: 479 YSDFLESFAKLARSAWTEFDLWLMGIGLSVMILSVSTQACMLVKLNIDQISEKERASSSF 538
Y +F S +LARS WTEF+L LM G ++++S+ Q + +K A S+
Sbjct: 485 YLNFFSSVVELARSKWTEFNLNLMITGFGILVISLILQFLAVFH------GDKSYAVGSW 538
Query: 539 IPKN-FFAFALVAIRAASFLSNSYILAEGRVANFLLATSCIASVWHSATKGKFIIEEFVF 597
+ F +V IRA SFLSNSYIL EG+VANFLLAT+ + + +S + E F+F
Sbjct: 539 LSTGAAFTLFIVTIRACSFLSNSYILEEGKVANFLLATTGLIKLRYSVMRKTMRKEAFMF 598
Query: 598 LLLNIFIRFGIEFGMSKQISGSIISNDHPVSIICGLFGSSFCSDLMEIFPIISLTLVAYI 657
L + +R I+ G++KQ + S + P ++ + +EI PI+S+ ++ +
Sbjct: 599 LAMVFVLRVSIDIGLTKQAATSQFMSSSPSWMLGIAPDHPALTYAIEIAPILSVVILICV 658
Query: 658 ILKCISYAISHRFLKYSVMSGSILSYIFIAIHWASESTLLSHTKATRETGISLAPRLVYT 717
+ I+ A + KY V GS+L + G + P+ VY
Sbjct: 659 LYVAIAKAPNEGVWKY-VTVGSMLLQV--------------------TGGRNRIPQTVYV 697
Query: 718 IGGLSLAISAFYRLFGSTDHLKMNERITSLSAVMLCSWSPTILILLGRQGPFVALICMTI 777
IG + L + A R+F + N I +++ V CS SP IL L G+QG +AL+ +
Sbjct: 698 IGLVQLCLLASARMFCTEK--DKNWAIRTVALVSACS-SPIIL-LSGKQGSMLALVYLVA 753
Query: 778 AWCIIKLQQKNQRELKLD--KGIHAADSVSVTQWSFLAVCLFYLTGHWCTFDGLRYGAAF 835
+CI++L+ +R K D + + V QWS L++C+F+ +GHWC FDGLRYGAAF
Sbjct: 754 GYCIMRLEGV-ERRTKSDGQSKFSKLNPLCVVQWSLLSICMFFASGHWCAFDGLRYGAAF 812
Query: 836 IGFDHFHIIRQGLLLSIDTFGVSHILPVLSLPFIAICWYNSASKNSKVNDATVTRLIQVL 895
+GFD F +IRQ +LL+I+TFG S IL V LP + I ++ S+ + + +L Q+
Sbjct: 813 VGFDEFVLIRQAILLTIETFGFSIILSVFGLPLL-IPFH---SQTPQAHGEKRHQLFQMY 868
Query: 896 LMYGLXXXXXXXXXXXXXXXQRRHLMVWGLFAPKYVFDAIGXXXXXXXXXXASIYY 951
+++G+ QRRHLMVWGLFAPK+VFD + AS YY
Sbjct: 869 MLFGVISATTVTATILCVTIQRRHLMVWGLFAPKFVFDVVDLILTDLLICLASAYY 924
>AT2G22530.1 | chr2:9572971-9577441 REVERSE LENGTH=959
Length = 958
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 161/560 (28%), Positives = 272/560 (48%), Gaps = 82/560 (14%)
Query: 67 DRLVIVVLDALRFDFV------APSTFFQERQPWMDKLQVLQRLAADEKTSARIFKALAD 120
DRL+++V+D L +FV P +E P+ L LA + + A A
Sbjct: 86 DRLILMVIDGLPAEFVLGKDGKPPEKVLKESMPYTQSL-----LANGDAIG---YHAKAA 137
Query: 121 PPTTSLQRLKALTTGGLPTFIDVGNSFGAPAIVEDNIMHQFAKNGKRVVMMGDDTWIQLY 180
PPT ++ RLKA+ +G + F+DV +F A+++DNI+ QF + G ++VM+GD+TW++L+
Sbjct: 138 PPTVTMPRLKAMVSGAIGGFLDVAFNFNTQALLDDNILGQFFRIGWKMVMLGDETWLKLF 197
Query: 181 PEHFNKSYPYPSFNVKDLDTVDNGVIEHLLPSLHKNDWDVLIAHFLGVDHAGHIFGVDST 240
P F + SF VKD VD V HL L+ +DW++LI H+LG+DH GH G +S
Sbjct: 198 PGLFMRHDGVSSFFVKDTVQVDRNVSRHLPDELNSDDWNLLILHYLGLDHVGHTGGRNSP 257
Query: 241 PMIQKLEQYNRILEDVIDT--LKSLSTSGGPHENTLLLVMGDHGQTLNGDHGGGTAEEVE 298
M KL++ ++D++ T L+++ TLL+++ DHG T NG+HGG + EE +
Sbjct: 258 LMPAKLKE----MDDIVRTMHLRAMMDRSHDQGQTLLIIVSDHGMTENGNHGGSSYEETD 313
Query: 299 TSLFAWSPKTPPNAVLSVLGKNLCNADLHGKEVCVSTMQQLDFAVTIAALLGIPFPFGSI 358
+ ++ +G N +D V+ Q+D A T+A L G+P P ++
Sbjct: 314 S-------------LMLFIGLNSNISDYASATNNVAF--QVDLAPTLALLFGVPIPKNNV 358
Query: 359 GRVNPELYALSAGTWDNQQIGANDCTQQNDLEAWMRRYAEALCINCWQVKRYI------- 411
G + P GT C+ + D E AL +N WQ+ R +
Sbjct: 359 GVLVP-------GTL---------CSLR-DFEQ-----LRALELNSWQLLRLMLAQIQSS 396
Query: 412 --DRYSATSVIGFRAEDLN-HVADLYSKAQANWSSVLRSTCPVET--SSQDELKECANKE 466
R S + E L+ +++ + + R+ + S+ + + E
Sbjct: 397 SFPRVSCNCFLDGTCEGLDLDISECSGDKEKQLICLFRNAAALHGIWKSKKSTESSSTME 456
Query: 467 CTSSALRLQIDAYSDFLESFAKLARSAWTEFDLWLMGIGLSVMILSVSTQACMLVKLNID 526
S AL DAY+ FL++ ++ S TE + L+G+G+S M+LS + + L +
Sbjct: 457 DFSRAL----DAYNTFLKTASEWLASKTTEKPVLLLGLGVSAMLLSCFICGTVFLSLFKE 512
Query: 527 QISE-KERA---SSSFIPKNFFAFALVAIRAASFLSNSYILAEGRVANFLLATSCIASVW 582
E K+R S+ + F FAL+ I S S+S + E + +F+++T + ++
Sbjct: 513 VYHEPKDRVCSLSNLLNLEEVFIFALLLILVISMGSSSMVEEEHYIWHFMVSTFHLLLLF 572
Query: 583 HSA-----TKGKFIIEEFVF 597
+A +KG I+ +F F
Sbjct: 573 KTAKSFKISKGMNILRDFKF 592
>AT3G01380.1 | chr3:144288-149828 REVERSE LENGTH=994
Length = 993
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 145/385 (37%), Gaps = 61/385 (15%)
Query: 9 RRRAWPLLFLAVLMFHSLAIYLFTRGFLLTRTELDVHSHRDDRIGISPGCSSWPPPAVDR 68
RR W L VL A+Y+ + + +T + VH G+ P + P R
Sbjct: 41 RRETW----LVVLGVALHAVYMLSIFDIYFKTPI-VH-------GMDPVPPRFSEPPAKR 88
Query: 69 LVIVVLDALRFD-FVAPSTFFQERQPWMDKLQVLQRLAADEKTSARIFKALADPPTTSLQ 127
LV+++ D LR D F P + R P++ + K R + A PPT S
Sbjct: 89 LVLLISDGLRADKFFEPDEEGKYRAPFLRNII---------KNQGRWGVSHARPPTESRP 139
Query: 128 RLKALTTGGLPTFIDVGNSFGAPAIVEDNIMHQFAKNGKRVVMMGDDTWIQLY----PEH 183
A+ G V + A + D++ +Q + G I ++ P
Sbjct: 140 GHVAIIAGFYEDPSAVTKGWKANPVEFDSVFNQ----SRHTFAFGSPDIIPIFCSALPHS 195
Query: 184 FNKSYP--YPSF--NVKDLDTVDNGVIEHLLPSLHKN---------DWDVLIAHFLGVDH 230
SYP Y F + LD E LL H + D V+ H LG D
Sbjct: 196 TWNSYPHEYEDFATDASFLDEWSFDQFEGLLNRSHADPKLKELLHQDKLVVFLHLLGCDS 255
Query: 231 AGHIFGVDSTPMIQKLEQYNRILEDVIDTLKSLSTSGGPHENTLLLVMGDHGQTLNGDHG 290
GH S+ + ++ ++I E V L+ T + DHG + G HG
Sbjct: 256 NGHAHRPYSSIYLNNVKVVDKIAERVYHLLEDYYRD----NRTSYIFTADHGMSDKGSHG 311
Query: 291 GGTAEEVETSLFAWS-----PK-----TPPNAVLSVLGKNLCNA----DLHGKEVCVSTM 336
G +T L AW PK + ++V + + K+ + D + V +
Sbjct: 312 DGHPTNTDTPLVAWGAGIQYPKPASGNSHSDSVTTFVDKHAHDMPTPYDWGLRRVERVDV 371
Query: 337 QQLDFAVTIAALLGIPFPFGSIGRV 361
Q D A ++ LLG+P P S+G +
Sbjct: 372 NQADIAPLMSTLLGLPCPVNSVGNL 396
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.137 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,826,954
Number of extensions: 819569
Number of successful extensions: 2340
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2329
Number of HSP's successfully gapped: 3
Length of query: 952
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 844
Effective length of database: 8,145,641
Effective search space: 6874921004
Effective search space used: 6874921004
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 116 (49.3 bits)