BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0155400 Os10g0155400|Os10g0155400
(519 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0155400 Amidase family protein 876 0.0
Os04g0182900 Amidase family protein 497 e-141
Os04g0183500 Amidase family protein 488 e-138
Os04g0184100 Amidase family protein 477 e-134
Os06g0271425 233 4e-61
Os06g0271450 227 2e-59
Os04g0185000 Amidase family protein 216 2e-56
Os04g0184500 Amidase family protein 102 9e-22
Os04g0183300 Amidase family protein 84 3e-16
>Os10g0155400 Amidase family protein
Length = 519
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/494 (89%), Positives = 441/494 (89%)
Query: 26 FDLEEATVDSIRRAFADGELTSRGLVELYLSRAAALDPSLHAVVEXXXXXXXXXXXXXXX 85
FDLEEATVDSIRRAFADGELTSRGLVELYLSRAAALDPSLHAVVE
Sbjct: 26 FDLEEATVDSIRRAFADGELTSRGLVELYLSRAAALDPSLHAVVELDPDGALAAADRADD 85
Query: 86 XXXXXXXXXXXXXXXXXXNGIPVLVKDNIXXXXXXXXLNATCGSLALVGSRPAGDAGVVE 145
NGIPVLVKDNI LNATCGSLALVGSRPAGDAGVVE
Sbjct: 86 ARRLFASAGGGALPPPLLNGIPVLVKDNIAAAGGGGALNATCGSLALVGSRPAGDAGVVE 145
Query: 146 RLRRAGAVVLGTASLSEWCNFRAPGIPAGWSPRAGQGKNPYVPSATPCXXXXXXXXXXXX 205
RLRRAGAVVLGTASLSEWCNFRAPGIPAGWSPRAGQGKNPYVPSATPC
Sbjct: 146 RLRRAGAVVLGTASLSEWCNFRAPGIPAGWSPRAGQGKNPYVPSATPCASSSGSAIAAAA 205
Query: 206 NMVAVTIGTETDGSIMCPSSYNSVVGIKPTVGLTSRAGVIIISPRMDTVGTVSDAVHVLE 265
NMVAVTIGTETDGSIMCPSSYNSVVGIKPTVGLTSRAGVIIISPRMDTVGTVSDAVHVLE
Sbjct: 206 NMVAVTIGTETDGSIMCPSSYNSVVGIKPTVGLTSRAGVIIISPRMDTVGTVSDAVHVLE 265
Query: 266 AIVGYDPRDAEATRMALQYIPEDGYRQFLNIDGLRGKRLGILRKDFFRFPSGSVQQKVFD 325
AIVGYDPRDAEATRMALQYIPEDGYRQFLNIDGLRGKRLGILRKDFFRFPSGSVQQKVFD
Sbjct: 266 AIVGYDPRDAEATRMALQYIPEDGYRQFLNIDGLRGKRLGILRKDFFRFPSGSVQQKVFD 325
Query: 326 EHFNTISKMGAILVDNLEIPNMNIINDAVQSGERALMLAEFKLSLNSYLSELASSPVRSL 385
EHFNTISKMGAILVDNLEIPNMNIINDAVQSGERALMLAEFKLSLNSYLSELASSPVRSL
Sbjct: 326 EHFNTISKMGAILVDNLEIPNMNIINDAVQSGERALMLAEFKLSLNSYLSELASSPVRSL 385
Query: 386 SDIIDFNNKHPVEERMAEFGQSYLLQSEATDGTGPTEKKAIAKLNELCESGLEKIMRVNQ 445
SDIIDFNNKHPVEERMAEFGQSYLLQSEATDGTGPTEKKAIAKLNELCESGLEKIMRVNQ
Sbjct: 386 SDIIDFNNKHPVEERMAEFGQSYLLQSEATDGTGPTEKKAIAKLNELCESGLEKIMRVNQ 445
Query: 446 LDAIVSPGASAHSLLAIGGYPAITVPAGYASNGVPFAICFGGLKGSEPRLIEIAYSFEQA 505
LDAIVSPGASAHSLLAIGGYPAITVPAGYASNGVPFAICFGGLKGSEPRLIEIAYSFEQA
Sbjct: 446 LDAIVSPGASAHSLLAIGGYPAITVPAGYASNGVPFAICFGGLKGSEPRLIEIAYSFEQA 505
Query: 506 TKVRRPPTLQHSII 519
TKVRRPPTLQHSII
Sbjct: 506 TKVRRPPTLQHSII 519
>Os04g0182900 Amidase family protein
Length = 507
Score = 497 bits (1280), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/495 (54%), Positives = 336/495 (67%), Gaps = 18/495 (3%)
Query: 26 FDLEEATVDSIRRAFADGELTSRGLVELYLSRAAALDPSLHAVVEXXXXXXXXXXXXXXX 85
F+ EATVD+I+ F++G LTS LV YL R A L+ LHAV+E
Sbjct: 25 FEFHEATVDAIQLGFSNGSLTSTALVRFYLDRIARLNTLLHAVIEVNPDALAQAARADAE 84
Query: 86 XXXXXXXXXXXXXXXXXXNGIPVLVKDNIXXXXXXXXLNATCGSLALVGSRPAGDAGVVE 145
+G+PVL+KD I LN T GSL+L+G+ DAGVV
Sbjct: 85 RATGHRCGPL--------HGVPVLLKDIIATRDR---LNTTAGSLSLLGAVARRDAGVVA 133
Query: 146 RLRRAGAVVLGTASLSEWCNFRA-PGIPAGWSPRAGQGKNPYVPSATPCXXXXXXXXXXX 204
RLRRAGAVVLG A+L EW NFR+ PG+ GWS R GQ +NPYV SA PC
Sbjct: 134 RLRRAGAVVLGKANLPEWANFRSSPGL-RGWSARGGQSRNPYVLSADPCGSSTGPAIAAA 192
Query: 205 XNMVAVTIGTETDGSIMCPSSYNSVVGIKPTVGLTSRAGVIIISPRMDTVG----TVSDA 260
NM AVT+GTET SI+CP++ NSVVGIKPTVGLTSR+GVI + R DTVG TV+DA
Sbjct: 193 ANMAAVTVGTETTASILCPAAANSVVGIKPTVGLTSRSGVIPFTTRQDTVGPLCRTVADA 252
Query: 261 VHVLEAIVGYDPRDAEATRMALQYIPEDGYRQFLNIDGLRGKRLGILRKDFFRFPSGSVQ 320
VHVL+AIVGYD DA+AT+ A +YIP GY QFL IDGL+GKR+GI FF FP+G+V+
Sbjct: 253 VHVLDAIVGYDALDAKATKAASKYIPAGGYVQFLRIDGLKGKRIGI-PDGFFDFPNGTVR 311
Query: 321 QKVFDEHFNTISKMGAILVDNLEIPNMNIINDAVQSGERALMLAEFKLSLNSYLSELASS 380
+ V+ +H NT+ + GA++++NLEI N+++I D +SG +LAEFKL+LN+YLS+L+ S
Sbjct: 312 KMVYKQHLNTMRQQGAVVIENLEIANLSVIFDGTKSGLLTALLAEFKLNLNNYLSDLSYS 371
Query: 381 PVRSLSDIIDFNNKHPVEERMAEFGQSYLLQSEATDGTGPTEKKAIAKLNELCESGLEKI 440
PVRSL++II FNN HPVEE + E GQS LL SE T G GP EK AI +LNEL +G+EK+
Sbjct: 372 PVRSLAEIIAFNNAHPVEEELKEHGQSILLMSENTAGIGPAEKAAIRRLNELSVNGVEKL 431
Query: 441 MRVNQLDAIVSPGASAHSLLAIGGYPAITVPAGYASNGVPFAICFGGLKGSEPRLIEIAY 500
M +QLDAIV+P ++A +LA G P + VPAGY GVPF +CFGGLKG EPRLIE+AY
Sbjct: 432 MNDHQLDAIVTPDSAAAVVLAFHGLPGVVVPAGYDEKGVPFGVCFGGLKGYEPRLIEMAY 491
Query: 501 SFEQATKVRRPPTLQ 515
+FEQ TKVR PP +
Sbjct: 492 AFEQVTKVRMPPMFK 506
>Os04g0183500 Amidase family protein
Length = 511
Score = 488 bits (1255), Expect = e-138, Method: Compositional matrix adjust.
Identities = 269/503 (53%), Positives = 331/503 (65%), Gaps = 26/503 (5%)
Query: 26 FDLEEATVDSIRRAFADGELTSRGLVELYLSRAAALDPSLHAVVEXXXXXXXXXXXXXXX 85
F+ EATVD+I+ F++G LTS LV YL R A L+P LHAV+E
Sbjct: 21 FEFNEATVDAIQLGFSNGSLTSTTLVRFYLDRIARLNPLLHAVIEVNPDALAQAARADAE 80
Query: 86 XXXXXXXXXXXXXXXXXXNGIPVLVKDNIXXXXXXXXLNATCGSLALVGSRPAGDAGVVE 145
+G+PVL+KDN+ LN T GSLAL+GS DAGV
Sbjct: 81 RATGRRCGPM--------HGVPVLLKDNMATRDR---LNTTAGSLALLGSIVRRDAGVAA 129
Query: 146 RLRRAGAVVLGTASLSEWCNFRAPGIPAGWSPRAGQG--------KNPYVPSATPCXXXX 197
RLR AGAV+LG ASLSEW NFR + +GWS R GQ +NPYV SA PC
Sbjct: 130 RLRAAGAVILGKASLSEWSNFRP--VKSGWSARGGQTVVFVKLPMENPYVLSADPCGSSS 187
Query: 198 XXXXXXXXNMVAVTIGTETDGSIMCPSSYNSVVGIKPTVGLTSRAGVIIISPRMDTVG-- 255
NM AVT+GTETDGSI+CP+S NSVVGIKPTVGLTSRAGVI ISPR DTVG
Sbjct: 188 GPAVAAAANMAAVTLGTETDGSILCPASLNSVVGIKPTVGLTSRAGVIPISPRQDTVGPI 247
Query: 256 --TVSDAVHVLEAIVGYDPRDAEATRMALQYIPEDGYRQFLNIDGLRGKRLGILRKDFFR 313
TVSDA HVL+ IVG+D DAEAT A +YIP GY +FL +DGL+GKR+GI F
Sbjct: 248 CRTVSDAAHVLDVIVGFDELDAEATGAASKYIPSGGYGRFLRMDGLKGKRIGIPNGFFTE 307
Query: 314 FPSGSVQQKVFDEHFNTISKMGAILVDNLEIP-NMNIINDAVQSGERALMLAEFKLSLNS 372
G Q +V+ +H +T+ K GA++++N+ I N++ D + S E + AEFKLSLN+
Sbjct: 308 GAYGKTQLRVYQKHLSTMRKHGALVIENINITTNLSAAQDVLYSNENIALQAEFKLSLNA 367
Query: 373 YLSELASSPVRSLSDIIDFNNKHPVEERMAEFGQSYLLQSEATDGTGPTEKKAIAKLNEL 432
YLS+L SPV SL+D++ FNN HPVEER+ +FGQ L+ ++ T+G GP EK AI +LNEL
Sbjct: 368 YLSDLLYSPVHSLADVVAFNNAHPVEERLQDFGQPDLIAAQKTNGIGPVEKAAIQRLNEL 427
Query: 433 CESGLEKIMRVNQLDAIVSPGASAHSLLAIGGYPAITVPAGYASNGVPFAICFGGLKGSE 492
GLE +MR++QLDAIV+P + A S AIGG PAITVPAGY +GVPF ICFGGLKG E
Sbjct: 428 SADGLENLMRMHQLDAIVTPNSHASSFFAIGGMPAITVPAGYDGHGVPFGICFGGLKGYE 487
Query: 493 PRLIEIAYSFEQATKVRRPPTLQ 515
PRLIE+AY+FEQATKVRR P+ +
Sbjct: 488 PRLIEMAYAFEQATKVRRMPSFK 510
>Os04g0184100 Amidase family protein
Length = 524
Score = 477 bits (1227), Expect = e-134, Method: Compositional matrix adjust.
Identities = 258/495 (52%), Positives = 321/495 (64%), Gaps = 18/495 (3%)
Query: 26 FDLEEATVDSIRRAFADGELTSRGLVELYLSRAAALDPSLHAVVEXXXXXXXXXXXXXXX 85
F+ EATVD+I+ F++G LTS LV YL + L+P LHAV+E
Sbjct: 42 FEFHEATVDAIQLGFSNGSLTSTALVRFYLDQITRLNPLLHAVIEVNPDALAQAARADDE 101
Query: 86 XXXXXXXXXXXXXXXXXXNGIPVLVKDNIXXXXXXXXLNATCGSLALVGSRPAGDAGVVE 145
+G+PVL+KDNI LN T GS AL+GS DAGV
Sbjct: 102 RATGRRCGPL--------HGVPVLLKDNIATRDR---LNTTAGSFALLGSVVPRDAGVAA 150
Query: 146 RLRRAGAVVLGTASLSEWCNFRAPGIPAGWSPRAGQGKNPYVPSATPCXXXXXXXXXXXX 205
RLR AGAV+LG ASL+EW +R P GWS R GQ NPYV S TPC
Sbjct: 151 RLRAAGAVILGKASLTEWSAYRPA--PNGWSARGGQTLNPYVRSFTPCGSSSGSAVAAAA 208
Query: 206 NMVAVTIGTETDGSIMCPSSYNSVVGIKPTVGLTSRAGVIIISPRMDTVG----TVSDAV 261
NM AVT+GTETDGSI+CP+S NSVVGIKPTVGLTSRAGV+ ISPR D+VG TVSDAV
Sbjct: 209 NMAAVTLGTETDGSILCPASLNSVVGIKPTVGLTSRAGVVPISPRQDSVGPICRTVSDAV 268
Query: 262 HVLEAIVGYDPRDAEATRMALQYIPEDGYRQFLNIDGLRGKRLGILRKDFFRFPSGSVQQ 321
HVL+AIVGYD DAEAT A +YIP GY QFL +DG +GKR+GI F + Q
Sbjct: 269 HVLDAIVGYDALDAEATGAASKYIPNGGYGQFLRMDGFKGKRIGIPNGFFTQEIFEKKQL 328
Query: 322 KVFDEHFNTISKMGAILVDNLEI-PNMNIINDAVQSGERALMLAEFKLSLNSYLSELASS 380
+ + +H + K GA++++N++I N+ + + + S E M+AEFKLSLN+YLS+L S
Sbjct: 329 RAYQKHIQLMRKHGAMVIENIDIAKNLTEVQNVLFSNEHIAMIAEFKLSLNAYLSDLLYS 388
Query: 381 PVRSLSDIIDFNNKHPVEERMAEFGQSYLLQSEATDGTGPTEKKAIAKLNELCESGLEKI 440
PVRSL+D+I FN HPVEER+ +FGQ Y +++E T+G GP EK +I LN+L GLEK+
Sbjct: 389 PVRSLADVIAFNKAHPVEERLKDFGQPYFIEAEKTNGIGPVEKASIQHLNKLSADGLEKL 448
Query: 441 MRVNQLDAIVSPGASAHSLLAIGGYPAITVPAGYASNGVPFAICFGGLKGSEPRLIEIAY 500
MR++QLDAIV+P + A+ G PAITVPAGY S GVPF CFGGLKG EPRLIE+AY
Sbjct: 449 MRMHQLDAIVTPNDNGRVFFAVSGMPAITVPAGYDSQGVPFGTCFGGLKGYEPRLIEMAY 508
Query: 501 SFEQATKVRRPPTLQ 515
++EQATKVR P +
Sbjct: 509 AYEQATKVRMMPGFK 523
>Os06g0271425
Length = 304
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 142/197 (72%), Gaps = 5/197 (2%)
Query: 140 DAGVVERLRRAGAVVLGTASLSEWCNFRAPGIPAGWSPRAGQGKNPYVPSATPCXXXXXX 199
DAGVV RLRRAGAVVLG A+L EW NFR GWS R GQG+NPYV SA C
Sbjct: 106 DAGVVRRLRRAGAVVLGKANLDEWANFRTIQGTGGWSARGGQGRNPYVLSAAQCGSSTGS 165
Query: 200 XXXXXXNMVAVTIGTETDGSIMCPSSYNSVVGIKPTVGLTSRAGVIIISPRMDTVG---- 255
NM A T+GTETDGSI+CPSS NSVVGIKPTVGLTSRAGV+ ISPR DT+G
Sbjct: 166 AIAAAANMAAATLGTETDGSILCPSSLNSVVGIKPTVGLTSRAGVVPISPRQDTIGPICR 225
Query: 256 TVSDAVHVLEAIVGYDPRDAEATRMALQYIPEDGYRQFLNIDGLRGKRLGILRKDFFRFP 315
TV+DAV VL+AIV YD RDA+ATR A +YIP GY QFL DGL+GKR+GI FF FP
Sbjct: 226 TVADAVQVLDAIVSYDSRDAKATRAASKYIPPGGYVQFLKPDGLKGKRIGIP-NGFFNFP 284
Query: 316 SGSVQQKVFDEHFNTIS 332
SG+VQQ V+ + +T+S
Sbjct: 285 SGTVQQIVYQQLLDTVS 301
>Os06g0271450
Length = 192
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 140/186 (75%)
Query: 329 NTISKMGAILVDNLEIPNMNIINDAVQSGERALMLAEFKLSLNSYLSELASSPVRSLSDI 388
N K GA++++NL+I N+ +I D + +G++ ++ AEFK SLN+YLS+L+ SPVRSL++I
Sbjct: 2 NQFRKQGAVVIENLDIANLTVIQDVLNNGQQIVLPAEFKSSLNTYLSDLSYSPVRSLAEI 61
Query: 389 IDFNNKHPVEERMAEFGQSYLLQSEATDGTGPTEKKAIAKLNELCESGLEKIMRVNQLDA 448
I FN+ HP+EER+ +FGQ L +E T G G E+ I +LN+L GLEK+M+ QLDA
Sbjct: 62 IAFNDAHPIEERLKDFGQLIFLVAENTTGIGALERAIIHQLNKLSADGLEKLMKDEQLDA 121
Query: 449 IVSPGASAHSLLAIGGYPAITVPAGYASNGVPFAICFGGLKGSEPRLIEIAYSFEQATKV 508
I++P S ++LAIGG PAITVPAGY GVPF ICFGGLKG EPRLIE+AY+FEQATKV
Sbjct: 122 IITPNDSVSTVLAIGGMPAITVPAGYGKRGVPFGICFGGLKGYEPRLIEMAYAFEQATKV 181
Query: 509 RRPPTL 514
R+ P
Sbjct: 182 RKAPKF 187
>Os04g0185000 Amidase family protein
Length = 202
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/187 (55%), Positives = 138/187 (73%), Gaps = 1/187 (0%)
Query: 331 ISKMGAILVDNL-EIPNMNIINDAVQSGERALMLAEFKLSLNSYLSELASSPVRSLSDII 389
+++ GA++++N+ N + + + + M AEFKLSLN+YLS+L SPVRSL+D+I
Sbjct: 16 LTEHGAMVIENIGTTENQTEVKNHLFEIDLVAMKAEFKLSLNAYLSDLLYSPVRSLADVI 75
Query: 390 DFNNKHPVEERMAEFGQSYLLQSEATDGTGPTEKKAIAKLNELCESGLEKIMRVNQLDAI 449
FNN HPVEER+ +FGQS+L S+ T+G GP EK + L E+ LEK+M+ +QLDAI
Sbjct: 76 AFNNAHPVEERLKDFGQSFLTDSQKTNGIGPREKTVLKILKEISTDVLEKLMKKHQLDAI 135
Query: 450 VSPGASAHSLLAIGGYPAITVPAGYASNGVPFAICFGGLKGSEPRLIEIAYSFEQATKVR 509
V+P + A ++ AIGG PAI VPAGY + GVPFAICFGGLKG EPRLIE+AY+FEQATKVR
Sbjct: 136 VTPNSDASTIFAIGGMPAIAVPAGYDNQGVPFAICFGGLKGYEPRLIEMAYAFEQATKVR 195
Query: 510 RPPTLQH 516
R P +H
Sbjct: 196 RMPRYKH 202
>Os04g0184500 Amidase family protein
Length = 182
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/156 (41%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 26 FDLEEATVDSIRRAFADGELTSRGLVELYLSRAAALDPSLHAVVEXXXXXXXXXXXXXXX 85
F +EEAT D+I+ F++G LTS LV YL R A L+P LHAV+E
Sbjct: 13 FQIEEATFDAIQLGFSNGSLTSTALVRFYLDRVARLNPLLHAVIEVNPDALAQAARADAE 72
Query: 86 XXXXXXXXXXXXXXXXXXNGIPVLVKDNIXXXXXXXXLNATCGSLALVGSRPAGDAGVVE 145
+G+PVL+KDNI LN T GSLAL+GS DAGV
Sbjct: 73 RASGRRGFGPL-------HGVPVLLKDNIATRDR---LNTTAGSLALLGSVVRCDAGVAA 122
Query: 146 RLRRAGAVVLGTASLSEWCNFRAPGIPAGWSPRAGQ 181
RLR AGAV+LG ++ +EW +FR + GWS R G+
Sbjct: 123 RLRAAGAVILGKSNPAEWSSFRP--LTNGWSARGGE 156
>Os04g0183300 Amidase family protein
Length = 210
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/80 (57%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 104 NGIPVLVKDNIXXXXXXXXLNATCGSLALVGSRPAGDAGVVERLRRAGAVVLGTASLSEW 163
+G+PVL+KD+I LN T GSLAL+GS DAGVV RLRRAGAVVLG A+L EW
Sbjct: 106 HGVPVLLKDSIATRDR---LNTTAGSLALLGSVVRRDAGVVRRLRRAGAVVLGKANLDEW 162
Query: 164 CNFRAPGIPAGWSPRAGQGK 183
NFR GWS R GQ +
Sbjct: 163 ANFRTIQGTGGWSARGGQSR 182
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,909,853
Number of extensions: 580433
Number of successful extensions: 1398
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 1387
Number of HSP's successfully gapped: 9
Length of query: 519
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 414
Effective length of database: 11,553,331
Effective search space: 4783079034
Effective search space used: 4783079034
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)