BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0116800 Os10g0116800|AK110804
(335 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0116800 Similar to Purple acid phosphatase 651 0.0
Os03g0238600 Similar to Purple acid phosphatase 474 e-134
Os11g0549620 Similar to Purple acid phosphatase 360 e-100
Os11g0549615 Acid phosphatase, type 5 family protein 351 5e-97
>Os10g0116800 Similar to Purple acid phosphatase
Length = 335
Score = 651 bits (1680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/319 (97%), Positives = 312/319 (97%)
Query: 17 CTSPATAELTRHEHPVAAGAPLRLLVVGDWGRKGGYNQTRVAEQMGKVAEETEIDFVVST 76
CTSPATAELTRHEHPVAAGAPLRLLVVGDWGRKGGYNQTRVAEQMGKVAEETEIDFVVST
Sbjct: 17 CTSPATAELTRHEHPVAAGAPLRLLVVGDWGRKGGYNQTRVAEQMGKVAEETEIDFVVST 76
Query: 77 GDNFLENGLAGVDDMAFHDSFMDVYTAQSLHKPWYLVLGNHDYRGNVLAQIDPALRKIDS 136
GDNFLENGLAGVDDMAFHDSFMDVYTAQSLHKPWYLVLGNHDYRGNVLAQIDPALRKIDS
Sbjct: 77 GDNFLENGLAGVDDMAFHDSFMDVYTAQSLHKPWYLVLGNHDYRGNVLAQIDPALRKIDS 136
Query: 137 RFICMRSFIVSAGIVDFFFVDTTPFQLQYWTDPGEDHYDWRGVAPRDAYIANLLEDVDAA 196
RFICMRSFIVSAGIVDFFFVDTTPFQLQYWTDPGEDHYDWRGVAPRDAYIANLLEDVDAA
Sbjct: 137 RFICMRSFIVSAGIVDFFFVDTTPFQLQYWTDPGEDHYDWRGVAPRDAYIANLLEDVDAA 196
Query: 197 MKKSTATWKIAVGHHTMRSVSAHGDTQXXXXXXXPVLKENGVDFYINGHDHCLEHISSRN 256
MKKSTATWKIAVGHHTMRSVSAHGDTQ PVLKENGVDFYINGHDHCLEHISSRN
Sbjct: 197 MKKSTATWKIAVGHHTMRSVSAHGDTQELLELLLPVLKENGVDFYINGHDHCLEHISSRN 256
Query: 257 SPIQYFTSGGGSKAWRGIFQQNEDKLQFFYDGQGFLSLELSENRARFAFYDVFGEALYHW 316
SPIQYFTSGGGSKAWRGIFQQNEDKLQFFYDGQGFLSLELSENRARFAFYDVFGEALYHW
Sbjct: 257 SPIQYFTSGGGSKAWRGIFQQNEDKLQFFYDGQGFLSLELSENRARFAFYDVFGEALYHW 316
Query: 317 SFSKANLQKVQSSASVTEE 335
SFSKANLQKVQSSASVTEE
Sbjct: 317 SFSKANLQKVQSSASVTEE 335
>Os03g0238600 Similar to Purple acid phosphatase
Length = 339
Score = 474 bits (1219), Expect = e-134, Method: Compositional matrix adjust.
Identities = 225/310 (72%), Positives = 255/310 (82%), Gaps = 2/310 (0%)
Query: 25 LTRHEHPVAAGAPLRLLVVGDWGRKGGYNQTRVAEQMGKVAEETEIDFVVSTGDNFLENG 84
L R EHP + L LLVVGDWGRKG YNQ+RVAEQMGKV E+ IDFV+STGDNF E+G
Sbjct: 31 LVRVEHPAKSDGSLSLLVVGDWGRKGTYNQSRVAEQMGKVGEKLNIDFVISTGDNFYEDG 90
Query: 85 LAGVDDMAFHDSFMDVYTAQSLHKPWYLVLGNHDYRGNVLAQIDPALRKIDSRFICMRSF 144
L GVDD AF +SF D+YTA+SL KPWYLVLGNHDYRG+VLAQ+ P LRKID RFICMRSF
Sbjct: 91 LTGVDDQAFEESFTDIYTAKSLQKPWYLVLGNHDYRGDVLAQLSPVLRKIDQRFICMRSF 150
Query: 145 IVSAGIVDFFFVDTTPFQLQYWTDPGEDHYDWRGVAPRDAYIANLLEDVDAAMKKSTATW 204
IV+A IVDFFF+DTTPFQL+YWT P + HYDWRGVAPR YI NLL+D+D AMKKSTA W
Sbjct: 151 IVNAEIVDFFFIDTTPFQLKYWTRPKDHHYDWRGVAPRQKYITNLLKDMDEAMKKSTAKW 210
Query: 205 KIAVGHHTMRSVSAHGDTQXXXXXXXPVLKENGVDFYINGHDHCLEHISSRNSPIQYFTS 264
KIAVGHHT+RSVS HGDT+ PVLK NG+DFYINGHDHCLEHISSR+SPIQYFTS
Sbjct: 211 KIAVGHHTIRSVSDHGDTKELLQLLLPVLKVNGIDFYINGHDHCLEHISSRDSPIQYFTS 270
Query: 265 GGGSKAWRGIFQQNEDKLQFFYDGQGFLSLELSENRARFAFYDVFGEALYHWSFSKANLQ 324
GGGSKAWRG+ Q N DKLQFFYDGQGF+SL++++++A F FYDV G LY WS SKAN
Sbjct: 271 GGGSKAWRGVLQPNSDKLQFFYDGQGFMSLQINQDQADFIFYDVSGNILYKWSKSKANY- 329
Query: 325 KVQSSASVTE 334
+Q S +TE
Sbjct: 330 -LQPSTYITE 338
>Os11g0549620 Similar to Purple acid phosphatase
Length = 330
Score = 360 bits (923), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/306 (55%), Positives = 211/306 (68%), Gaps = 5/306 (1%)
Query: 19 SPATAELTRHEHPVAAGAPLRLLVVGDWGRKGGYNQTRVAEQMGKVAEETEIDFVVSTGD 78
SP EL R EHP L +LVVGDWGRKG YNQT VA QMG + EE DF++STGD
Sbjct: 25 SPVAGELARVEHPTKEDGSLAVLVVGDWGRKGQYNQTLVATQMGVIGEELAADFILSTGD 84
Query: 79 NFLENGLAGVDDMA-FHDSFMDVYTAQSLHKPWYLVLGNHDYRGNVLAQIDPALRKIDSR 137
NF +GL G +D A F +SF ++YTA SL KPWY+VLGNHDY G+ LAQ PA+R +DSR
Sbjct: 85 NFYNDGLTGDNDTASFQESFTNIYTADSLQKPWYIVLGNHDYTGDALAQQSPAIRAVDSR 144
Query: 138 FICM-RSFIVSAGIVDFFFVDTTPFQLQYWTDPGEDHYDWRGVAPRDAYIANLLEDVDAA 196
+ + +SFIV + I +FF VDT PF +YW E +DWR VAPRD Y++ LL D+ A
Sbjct: 145 WTSINKSFIVDSDIAEFFLVDTVPFVQKYWN---ESKFDWRQVAPRDTYLSTLLTDLGDA 201
Query: 197 MKKSTATWKIAVGHHTMRSVSAHGDTQXXXXXXXPVLKENGVDFYINGHDHCLEHISSRN 256
M +S ATWKI VGHHT+ S HG+T PVLK G D YINGHDHCL+ I+S +
Sbjct: 202 MSQSNATWKIVVGHHTISSGCEHGNTTDLVAMLLPVLKTYGADMYINGHDHCLQRITSID 261
Query: 257 SPIQYFTSGGGSKAWRGIFQQNEDKLQFFYDGQGFLSLELSENRARFAFYDVFGEALYHW 316
SP+++ TSGGGS+AW G F+Q DKL+F YDGQGFLS++L+ A FAFYDV G LY W
Sbjct: 262 SPLEFITSGGGSRAWAGKFKQTSDKLEFIYDGQGFLSMQLTMAEASFAFYDVTGAVLYSW 321
Query: 317 SFSKAN 322
+K+
Sbjct: 322 QLAKST 327
>Os11g0549615 Acid phosphatase, type 5 family protein
Length = 294
Score = 351 bits (900), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 158/241 (65%), Positives = 191/241 (79%)
Query: 24 ELTRHEHPVAAGAPLRLLVVGDWGRKGGYNQTRVAEQMGKVAEETEIDFVVSTGDNFLEN 83
E+ R EHP L LL VGDWGR+G YNQ+ VA QMG V E+ +IDFV+STGDNF +N
Sbjct: 23 EMPRMEHPRKGDGSLSLLAVGDWGRRGAYNQSMVAAQMGIVGEKMDIDFVISTGDNFYKN 82
Query: 84 GLAGVDDMAFHDSFMDVYTAQSLHKPWYLVLGNHDYRGNVLAQIDPALRKIDSRFICMRS 143
GL GVDD AF +SF D+YTA+SLHKPWY VLGNHDYRG+ LAQ+ P LRK+DSR+IC++S
Sbjct: 83 GLTGVDDKAFEESFSDIYTAKSLHKPWYTVLGNHDYRGDALAQLSPVLRKVDSRWICIKS 142
Query: 144 FIVSAGIVDFFFVDTTPFQLQYWTDPGEDHYDWRGVAPRDAYIANLLEDVDAAMKKSTAT 203
F+VSA I DFFFVDTTPF L+YWTDP YDWRGV+PR+ YIAN+L+D++ A+++S A
Sbjct: 143 FVVSAEIADFFFVDTTPFVLKYWTDPKNSKYDWRGVSPRETYIANVLKDLEDALEQSKAP 202
Query: 204 WKIAVGHHTMRSVSAHGDTQXXXXXXXPVLKENGVDFYINGHDHCLEHISSRNSPIQYFT 263
WKI VGHH +RSVS HGDT+ P+LK +GVD Y+NGHDHCLEHISSR+S IQY T
Sbjct: 203 WKIVVGHHAIRSVSQHGDTKELLEHLLPILKAHGVDLYLNGHDHCLEHISSRDSKIQYLT 262
Query: 264 S 264
S
Sbjct: 263 S 263
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,006,251
Number of extensions: 454985
Number of successful extensions: 1070
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1067
Number of HSP's successfully gapped: 4
Length of query: 335
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 234
Effective length of database: 11,762,187
Effective search space: 2752351758
Effective search space used: 2752351758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)