BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0569300 Os09g0569300|AK069587
         (222 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0569300  Similar to Calmodulin-binding heat-shock protein    431   e-121
Os06g0256300  Similar to Calmodulin-binding heat-shock protein    184   4e-47
Os03g0712000                                                      137   4e-33

>Os09g0569300 Similar to Calmodulin-binding heat-shock protein
          Length = 222

 Score =  431 bits (1109), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 211/222 (95%), Positives = 211/222 (95%)

Query: 1   MLCSKLDVASFLLPAYWVQTSLNLDHXXXXXXXXXXXCIRCLRDTCIPEDAMLKDPRRLY 60
           MLCSKLDVASFLLPAYWVQTSLNLDH           CIRCLRDTCIPEDAMLKDPRRLY
Sbjct: 1   MLCSKLDVASFLLPAYWVQTSLNLDHLLFLGSLPCLLCIRCLRDTCIPEDAMLKDPRRLY 60

Query: 61  APGRIYHIVERKMFRCGRYPPVVKTAVPVDGRFEHIVLSCNATMDHAIIWIEREAQKALD 120
           APGRIYHIVERKMFRCGRYPPVVKTAVPVDGRFEHIVLSCNATMDHAIIWIEREAQKALD
Sbjct: 61  APGRIYHIVERKMFRCGRYPPVVKTAVPVDGRFEHIVLSCNATMDHAIIWIEREAQKALD 120

Query: 121 LMLEKEKTMEVPSEQRMERNESLQREHVEEHKAALRRAVTLSVPDARSPSAYGTFGEQPE 180
           LMLEKEKTMEVPSEQRMERNESLQREHVEEHKAALRRAVTLSVPDARSPSAYGTFGEQPE
Sbjct: 121 LMLEKEKTMEVPSEQRMERNESLQREHVEEHKAALRRAVTLSVPDARSPSAYGTFGEQPE 180

Query: 181 RSESFPPVSAMARQRMSWNDLIERVFDRDESGHIVLRSSPSP 222
           RSESFPPVSAMARQRMSWNDLIERVFDRDESGHIVLRSSPSP
Sbjct: 181 RSESFPPVSAMARQRMSWNDLIERVFDRDESGHIVLRSSPSP 222



>Os06g0256300 Similar to Calmodulin-binding heat-shock protein
          Length = 453

 Score =  184 bits (467), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 96/183 (52%), Positives = 123/183 (67%), Gaps = 8/183 (4%)

Query: 39  IRCLRDTCIPEDAMLKDPRRLYAPGRIYHIVERKMFRCGRYPPVVKTAVPVDGRFEHIVL 98
           I CLRDT   +    KDPRRLYAPGR+YHIVERK  RCGR+PP V+TA+PV+GRFEHIVL
Sbjct: 264 IMCLRDTFKQDKRKFKDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVEGRFEHIVL 323

Query: 99  SCNATMDHAIIWIEREAQKALDLMLEKEKTMEVPSEQRMERNESLQREHVEEHKAALRRA 158
           SC+ T DHAI+WIERE++KAL+LM   EK    P++Q+MER +S +    EEHK AL RA
Sbjct: 324 SCSTTSDHAIVWIERESEKALELMKGNEKPTTPPAQQKMERLQSFE----EEHKNALERA 379

Query: 159 VTLSVPDARSPSAY----GTFGEQPERSESFPPVSAMARQRMSWNDLIERVFDRDESGHI 214
            TL VP A   S      G+    P  + S     A +  R SW++L+ ++F RDE G +
Sbjct: 380 KTLDVPHAVDLSEVEIQEGSSPTPPSDTHSEATSEAKSAGRTSWDELMHKLFTRDEGGKL 439

Query: 215 VLR 217
           V++
Sbjct: 440 VVK 442



>Os03g0712000 
          Length = 382

 Score =  137 bits (346), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/115 (59%), Positives = 89/115 (77%), Gaps = 4/115 (3%)

Query: 38  CIRCLRDTCIPEDAMLKDPRRLYAPGRIYHIVERKMFRCGRYPPVVKTAVPVDGRFEHIV 97
           C  C+RDT + E+  LKD  +LYAPGR++HIVER+  RCGR PP V+TAVP +GRFEH+V
Sbjct: 199 CFICMRDTFVSEE-KLKDASKLYAPGRVFHIVERENCRCGRLPPQVRTAVPAEGRFEHVV 257

Query: 98  LSCNATMDHAIIWIEREAQKALDLMLEKEKTMEVPSEQRMERNESLQREHVEEHK 152
           LSCNAT DH IIWIE+EAQKALDLM ++E T+  PS+Q+M R +  + E + +H+
Sbjct: 258 LSCNATSDHGIIWIEKEAQKALDLMEQEELTLP-PSQQKMLRVK--ETESLADHQ 309



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.134    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,709,772
Number of extensions: 298249
Number of successful extensions: 895
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 893
Number of HSP's successfully gapped: 3
Length of query: 222
Length of database: 17,035,801
Length adjustment: 97
Effective length of query: 125
Effective length of database: 11,971,043
Effective search space: 1496380375
Effective search space used: 1496380375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 154 (63.9 bits)