BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0560800 Os09g0560800|AK101993
         (319 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0560800  MOSC, N-terminal beta barrel domain containing...   617   e-177
Os09g0560700  MOSC, N-terminal beta barrel domain containing...   513   e-146

>Os09g0560800 MOSC, N-terminal beta barrel domain containing protein
          Length = 319

 Score =  617 bits (1590), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/299 (100%), Positives = 299/299 (100%)

Query: 21  TVKSIVVYPIKSCRGISVPQAAITSTGLRWDRPWLVMNSAGRAFTQRVEPKLALIEVEMP 80
           TVKSIVVYPIKSCRGISVPQAAITSTGLRWDRPWLVMNSAGRAFTQRVEPKLALIEVEMP
Sbjct: 21  TVKSIVVYPIKSCRGISVPQAAITSTGLRWDRPWLVMNSAGRAFTQRVEPKLALIEVEMP 80

Query: 81  QEAFTEWQPTPDSHMVIRAPGLDPLKIPLGAKRATVDDVSIWEWSGSAYDEGDEAAEWFS 140
           QEAFTEWQPTPDSHMVIRAPGLDPLKIPLGAKRATVDDVSIWEWSGSAYDEGDEAAEWFS
Sbjct: 81  QEAFTEWQPTPDSHMVIRAPGLDPLKIPLGAKRATVDDVSIWEWSGSAYDEGDEAAEWFS 140

Query: 141 SYFGKPTRLVRFNEASEIRETNPDYAQGYKVLFADDFPFLLASQGSVDALNSILKEPVPM 200
           SYFGKPTRLVRFNEASEIRETNPDYAQGYKVLFADDFPFLLASQGSVDALNSILKEPVPM
Sbjct: 141 SYFGKPTRLVRFNEASEIRETNPDYAQGYKVLFADDFPFLLASQGSVDALNSILKEPVPM 200

Query: 201 NRFRPNIIVDGCHPYSEDLWKTIKIGKLTFLGVKLCDRCKVPTINQDNGIPGEEPTEALQ 260
           NRFRPNIIVDGCHPYSEDLWKTIKIGKLTFLGVKLCDRCKVPTINQDNGIPGEEPTEALQ
Sbjct: 201 NRFRPNIIVDGCHPYSEDLWKTIKIGKLTFLGVKLCDRCKVPTINQDNGIPGEEPTEALQ 260

Query: 261 ALRSDEVLRPSHKNKRRVYFGQNLVCKESLSAKDEGRIIKVGDPVYVLESFPSSDEVPA 319
           ALRSDEVLRPSHKNKRRVYFGQNLVCKESLSAKDEGRIIKVGDPVYVLESFPSSDEVPA
Sbjct: 261 ALRSDEVLRPSHKNKRRVYFGQNLVCKESLSAKDEGRIIKVGDPVYVLESFPSSDEVPA 319



>Os09g0560700 MOSC, N-terminal beta barrel domain containing protein
          Length = 324

 Score =  513 bits (1321), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 242/300 (80%), Positives = 269/300 (89%), Gaps = 1/300 (0%)

Query: 21  TVKSIVVYPIKSCRGISVPQAAITSTGLRWDRPWLVMNSAGRAFTQRVEPKLALIEVEMP 80
           TV+SI++YPIKSCRGISVPQA ITSTG RWDR W+V+NS GRA+TQRVEPKLAL+EVEMP
Sbjct: 25  TVRSILIYPIKSCRGISVPQAPITSTGFRWDRQWVVVNSKGRAYTQRVEPKLALVEVEMP 84

Query: 81  QEAFTE-WQPTPDSHMVIRAPGLDPLKIPLGAKRATVDDVSIWEWSGSAYDEGDEAAEWF 139
            EAF E W+PT DS++V RAPG+DPLKIPL A++A ++DVS+WEWSGSAYDEG EAAEWF
Sbjct: 85  PEAFAEEWRPTADSYLVGRAPGMDPLKIPLSAEQAIINDVSVWEWSGSAYDEGAEAAEWF 144

Query: 140 SSYFGKPTRLVRFNEASEIRETNPDYAQGYKVLFADDFPFLLASQGSVDALNSILKEPVP 199
           SSYFG P+RLVRF E SEIR TNPDYAQGYK++F D FPFL+ASQGS+DALN +LKEPVP
Sbjct: 145 SSYFGNPSRLVRFKEGSEIRPTNPDYAQGYKIMFTDCFPFLMASQGSLDALNEVLKEPVP 204

Query: 200 MNRFRPNIIVDGCHPYSEDLWKTIKIGKLTFLGVKLCDRCKVPTINQDNGIPGEEPTEAL 259
           MNRFRPNI+VDGCHPYSEDLWKTIKI KLTF GVKLC+RCKVPTINQ+NGI G EPTE L
Sbjct: 205 MNRFRPNILVDGCHPYSEDLWKTIKINKLTFQGVKLCNRCKVPTINQENGILGTEPTETL 264

Query: 260 QALRSDEVLRPSHKNKRRVYFGQNLVCKESLSAKDEGRIIKVGDPVYVLESFPSSDEVPA 319
              RSDEVLRPSHKNKR+VYFGQNLVCKESLSAK +GRIIKV DPVYVLE FPSSDE PA
Sbjct: 265 LTFRSDEVLRPSHKNKRQVYFGQNLVCKESLSAKGKGRIIKVSDPVYVLERFPSSDEAPA 324



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,004,844
Number of extensions: 473334
Number of successful extensions: 871
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 870
Number of HSP's successfully gapped: 2
Length of query: 319
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 218
Effective length of database: 11,762,187
Effective search space: 2564156766
Effective search space used: 2564156766
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)