Os09g0560700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MOSC, N-terminal beta barrel domain containing protein.
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Os09g0560700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : MOSC, N-terminal beta barrel domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.73 | 0.381 | 10.7 | -0.553 | 2.26 | 1.79 | -0.642 | -2.43 | -0.796 | 21.4 | 9.766 | 283 | -- | -- |
| 69.92 | 0.389 | 10.7 | -0.175 | 2.26 | 1.72 | -0.66 | -- | -0.691 | 21.4 | 9.252 | 283 | -- | -- |
| 67.14 | 0.382 | 10.8 | -0.549 | 2.24 | 1.79 | -- | -2.54 | -0.8 | 21.4 | 10.08 | 310 | -- | -- |
| 71.52 | 0.394 | 10.7 | -0.156 | 2.27 | 1.74 | -- | -- | -0.693 | 21.5 | 9.93 | 268 | -- | -- |
| 254.91 | 0.744 | 10.7 | -1.04 | -- | 2.4 | -- | -2.79 | -0.965 | -- | 23.7 | 670 | -- | -- |
| 101.67 | 0.473 | 10.7 | 0.194 | 2.47 | -- | -0.72 | -- | -0.446 | 20.7 | -- | -- | -- | -- |
| 103.37 | 0.476 | 10.7 | 0.217 | 2.47 | -- | -- | -- | -0.446 | 20.7 | -- | -- | -- | -- |
| 260.05 | 0.751 | 10.7 | -0.349 | -- | 2.58 | -- | -- | -0.742 | -- | 24.1 | 687 | -- | -- |
| 72.1 | 0.395 | 10.7 | -- | 2.27 | 1.66 | -- | -- | -0.667 | 21.4 | 9.418 | 268 | -- | -- |
| 449.24 | 0.99 | 10.6 | 0.213 | -- | -- | -- | -- | -0.466 | -- | -- | -- | -- | -- |
| 104.61 | 0.478 | 10.7 | -- | 2.47 | -- | -- | -- | -0.47 | 20.8 | -- | -- | -- | -- |
| 263.04 | 0.755 | 10.6 | -- | -- | 2.52 | -- | -- | -0.69 | -- | 24.2 | 686 | -- | -- |
| 450.44 | 0.991 | 10.6 | -- | -- | -- | -- | -- | -0.49 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 22 |
| 5 | 58.05 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 18 |
| 33 | 61.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 12 |
| 34 | 61.96 | temperature | 10 | 90 | > th | dose dependent | sin | 19 | NA |
| 49 | 62.52 | temperature | 10 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 50 | 62.54 | temperature | 10 | 270 | > th | dose dependent | sin | 21 | NA |
| 64 | 63.02 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 22 |
| 80 | 63.47 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 20 |
| 85 | 63.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 17 |
| 87 | 63.57 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 22 |
| 89 | 63.59 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 99 | 63.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 102 | 63.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 15 |
| 108 | 63.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 17 |
| 198 | 65.35 | temperature | 30 | 90 | < th | dose dependent | sin | 19 | NA |
| 228 | 65.68 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 20 |
| 238 | 65.75 | temperature | 10 | 270 | > th | dose dependent | no | NA | NA |
| 332 | 66.91 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 349 | 67.16 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 418 | 67.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 13 |
| 432 | 67.78 | temperature | 15 | 10 | > th | dose dependent | rect. | 12 | 18 |
| 476 | 68.01 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 507 | 68.22 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 517 | 68.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 523 | 68.33 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 785 | 69.47 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 14 |
| 865 | 69.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 966 | 70.25 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 1 |