BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0560700 Os09g0560700|AK069278
         (324 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0560700  MOSC, N-terminal beta barrel domain containing...   646   0.0  
Os09g0560800  MOSC, N-terminal beta barrel domain containing...   512   e-145

>Os09g0560700 MOSC, N-terminal beta barrel domain containing protein
          Length = 324

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 314/324 (96%), Positives = 314/324 (96%)

Query: 1   MEKAAGFXXXXXXXXXXVPPEPAATVRSILIYPIKSCRGISVPQAPITSTGFRWDRQWVV 60
           MEKAAGF          VPPEPAATVRSILIYPIKSCRGISVPQAPITSTGFRWDRQWVV
Sbjct: 1   MEKAAGFLSSLLGGGEEVPPEPAATVRSILIYPIKSCRGISVPQAPITSTGFRWDRQWVV 60

Query: 61  VNSKGRAYTQRVEPKLALVEVEMPPEAFAEEWRPTADSYLVGRAPGMDPLKIPLSAEQAI 120
           VNSKGRAYTQRVEPKLALVEVEMPPEAFAEEWRPTADSYLVGRAPGMDPLKIPLSAEQAI
Sbjct: 61  VNSKGRAYTQRVEPKLALVEVEMPPEAFAEEWRPTADSYLVGRAPGMDPLKIPLSAEQAI 120

Query: 121 INDVSVWEWSGSAYDEGAEAAEWFSSYFGNPSRLVRFKEGSEIRPTNPDYAQGYKIMFTD 180
           INDVSVWEWSGSAYDEGAEAAEWFSSYFGNPSRLVRFKEGSEIRPTNPDYAQGYKIMFTD
Sbjct: 121 INDVSVWEWSGSAYDEGAEAAEWFSSYFGNPSRLVRFKEGSEIRPTNPDYAQGYKIMFTD 180

Query: 181 CFPFLMASQGSLDALNEVLKEPVPMNRFRPNILVDGCHPYSEDLWKTIKINKLTFQGVKL 240
           CFPFLMASQGSLDALNEVLKEPVPMNRFRPNILVDGCHPYSEDLWKTIKINKLTFQGVKL
Sbjct: 181 CFPFLMASQGSLDALNEVLKEPVPMNRFRPNILVDGCHPYSEDLWKTIKINKLTFQGVKL 240

Query: 241 CNRCKVPTINQENGILGTEPTETLLTFRSDEVLRPSHKNKRQVYFGQNLVCKESLSAKGK 300
           CNRCKVPTINQENGILGTEPTETLLTFRSDEVLRPSHKNKRQVYFGQNLVCKESLSAKGK
Sbjct: 241 CNRCKVPTINQENGILGTEPTETLLTFRSDEVLRPSHKNKRQVYFGQNLVCKESLSAKGK 300

Query: 301 GRIIKVSDPVYVLERFPSSDEAPA 324
           GRIIKVSDPVYVLERFPSSDEAPA
Sbjct: 301 GRIIKVSDPVYVLERFPSSDEAPA 324



>Os09g0560800 MOSC, N-terminal beta barrel domain containing protein
          Length = 319

 Score =  512 bits (1319), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 242/300 (80%), Positives = 269/300 (89%), Gaps = 1/300 (0%)

Query: 25  TVRSILIYPIKSCRGISVPQAPITSTGFRWDRQWVVVNSKGRAYTQRVEPKLALVEVEMP 84
           TV+SI++YPIKSCRGISVPQA ITSTG RWDR W+V+NS GRA+TQRVEPKLAL+EVEMP
Sbjct: 21  TVKSIVVYPIKSCRGISVPQAAITSTGLRWDRPWLVMNSAGRAFTQRVEPKLALIEVEMP 80

Query: 85  PEAFAEEWRPTADSYLVGRAPGMDPLKIPLSAEQAIINDVSVWEWSGSAYDEGAEAAEWF 144
            EAF E W+PT DS++V RAPG+DPLKIPL A++A ++DVS+WEWSGSAYDEG EAAEWF
Sbjct: 81  QEAFTE-WQPTPDSHMVIRAPGLDPLKIPLGAKRATVDDVSIWEWSGSAYDEGDEAAEWF 139

Query: 145 SSYFGNPSRLVRFKEGSEIRPTNPDYAQGYKIMFTDCFPFLMASQGSLDALNEVLKEPVP 204
           SSYFG P+RLVRF E SEIR TNPDYAQGYK++F D FPFL+ASQGS+DALN +LKEPVP
Sbjct: 140 SSYFGKPTRLVRFNEASEIRETNPDYAQGYKVLFADDFPFLLASQGSVDALNSILKEPVP 199

Query: 205 MNRFRPNILVDGCHPYSEDLWKTIKINKLTFQGVKLCNRCKVPTINQENGILGTEPTETL 264
           MNRFRPNI+VDGCHPYSEDLWKTIKI KLTF GVKLC+RCKVPTINQ+NGI G EPTE L
Sbjct: 200 MNRFRPNIIVDGCHPYSEDLWKTIKIGKLTFLGVKLCDRCKVPTINQDNGIPGEEPTEAL 259

Query: 265 LTFRSDEVLRPSHKNKRQVYFGQNLVCKESLSAKGKGRIIKVSDPVYVLERFPSSDEAPA 324
              RSDEVLRPSHKNKR+VYFGQNLVCKESLSAK +GRIIKV DPVYVLE FPSSDE PA
Sbjct: 260 QALRSDEVLRPSHKNKRRVYFGQNLVCKESLSAKDEGRIIKVGDPVYVLESFPSSDEVPA 319



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.317    0.135    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,796,163
Number of extensions: 501065
Number of successful extensions: 1020
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 1019
Number of HSP's successfully gapped: 2
Length of query: 324
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 223
Effective length of database: 11,762,187
Effective search space: 2622967701
Effective search space used: 2622967701
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)