Os09g0560800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MOSC, N-terminal beta barrel domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0560800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : MOSC, N-terminal beta barrel domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.3 | 0.38 | 11.8 | -2.49 | 0.834 | 1.61 | -1.39 | -1.32 | -1.2 | 20.6 | 25.41 | 1152 | -- | -- |
| 66.96 | 0.381 | 11.8 | -2.12 | 0.831 | 1.52 | -1.55 | -- | -1.07 | 20.7 | 25.5 | 1152 | -- | -- |
| 71.47 | 0.394 | 11.8 | -2.46 | 0.852 | 1.63 | -- | -1.4 | -1.2 | 20.4 | 25.4 | 1152 | -- | -- |
| 74.66 | 0.402 | 11.8 | -2.09 | 0.86 | 1.52 | -- | -- | -1.09 | 20.5 | 25.5 | 1169 | -- | -- |
| 81.87 | 0.421 | 11.8 | -2.61 | -- | 1.73 | -- | -1.79 | -1.29 | -- | 25.41 | 793 | -- | -- |
| 131.01 | 0.537 | 11.7 | -1.69 | 1.03 | -- | -1.37 | -- | -0.535 | 21.8 | -- | -- | -- | -- |
| 138.13 | 0.55 | 11.7 | -1.64 | 1.04 | -- | -- | -- | -0.532 | 21.8 | -- | -- | -- | -- |
| 86.51 | 0.433 | 11.8 | -2.1 | -- | 1.63 | -- | -- | -1.13 | -- | 25.5 | 783 | -- | -- |
| 182.02 | 0.628 | 11.7 | -- | 0.8 | 1.12 | -- | -- | -0.744 | 20 | 25.6 | 1063 | -- | -- |
| 202.29 | 0.665 | 11.6 | -1.63 | -- | -- | -- | -- | -0.533 | -- | -- | -- | -- | -- |
| 208.71 | 0.676 | 11.6 | -- | 1.03 | -- | -- | -- | -0.35 | 21.6 | -- | -- | -- | -- |
| 196.49 | 0.653 | 11.7 | -- | -- | 1.26 | -- | -- | -0.776 | -- | 25.41 | 738 | -- | -- |
| 272.07 | 0.77 | 11.6 | -- | -- | -- | -- | -- | -0.353 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.28 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 3 | 65.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 19 |
| 10 | 66.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 18 | 66.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 11 |
| 28 | 66.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 13 |
| 37 | 66.73 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 70 | 66.94 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 11 |
| 78 | 67.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 85 | 67.04 | temperature | 10 | 1440 | > th | dose dependent | sin | 19 | NA |
| 103 | 67.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 13 |
| 151 | 67.33 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 10 |
| 155 | 67.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 180 | 67.46 | temperature | 30 | 1440 | < th | dose dependent | sin | 19 | NA |
| 306 | 67.92 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 13 |
| 335 | 68.01 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 23 |
| 337 | 68.02 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 443 | 68.27 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 446 | 68.28 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 17 |
| 452 | 68.29 | temperature | 25 | 1440 | > th | dose independent | rect. | 13 | 11 |
| 532 | 68.49 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 534 | 68.49 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 550 | 68.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 23 |
| 727 | 68.85 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 14 |
| 750 | 68.89 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 816 | 69.03 | temperature | 25 | 1440 | < th | dose independent | rect. | 13 | 11 |
| 894 | 69.18 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 983 | 69.37 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |