BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0560800 Os09g0560800|AK101993
         (319 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G30910.1  | chr1:11000912-11002801 FORWARD LENGTH=319          371   e-103
AT5G44720.1  | chr5:18043086-18045275 FORWARD LENGTH=309          367   e-102
AT1G16540.1  | chr1:5659465-5665201 FORWARD LENGTH=820            115   2e-26

>AT1G30910.1 | chr1:11000912-11002801 FORWARD LENGTH=319
          Length = 318

 Score =  371 bits (953), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 175/296 (59%), Positives = 219/296 (73%), Gaps = 2/296 (0%)

Query: 22  VKSIVVYPIKSCRGISVPQAAITSTGLRWDRPWLVMNSAGRAFTQRVEPKLALIEVEMPQ 81
           V S+ VYPIKSCRGIS+ QAA+T TG RWDR WL++NS GR  TQRVEPKL+LIEVEMP+
Sbjct: 21  VSSLFVYPIKSCRGISLSQAALTPTGFRWDRNWLIVNSKGRGLTQRVEPKLSLIEVEMPK 80

Query: 82  EAFTE-WQPTPDSHMVIRAPGLDPLKIPLGAKRATVDDVSIWEWSGSAYDEGDEAAEWFS 140
            AF E W+P   S+MV+RAPG+D LK+ L       D VS+WEWSGSA DEG+EA++WF+
Sbjct: 81  HAFGEDWEPEKSSNMVVRAPGMDALKVSLAKPDKIADGVSVWEWSGSALDEGEEASQWFT 140

Query: 141 SYFGKPTRLVRFNEASEIRETNPDYAQGYKVLFADDFPFLLASQGSVDALNSILKEPVPM 200
           ++ GKP RLVRFN A E R  +P+YA G+  +F+D +PFLL SQGS+D+LN +LKEPVP+
Sbjct: 141 NFVGKPCRLVRFNSAYETRPVDPNYAPGHIAMFSDMYPFLLISQGSLDSLNKLLKEPVPI 200

Query: 201 NRFRPNIIVDGCHPYSEDLWKTIKIGKLTFLGVKLCDRCKVPTINQDNGIPGEEPTEALQ 260
           NRFRPNI VDGC P++EDLW  I I   TF GVKLC RCKVPTI+Q+ GI G+EP E L+
Sbjct: 201 NRFRPNIFVDGCEPFAEDLWTEILINGFTFHGVKLCSRCKVPTISQETGIGGQEPIETLR 260

Query: 261 ALRSDEVLRPSHKNKRRVYFGQNLVCKESLSAKDEGRIIKVGDPVYVLESFPSSDE 316
             RSD+VL+P  K   ++YFGQN+V K+       G+ I++GD V VL    S  E
Sbjct: 261 TFRSDKVLQPKSKPHGKIYFGQNMVWKDGF-GDGIGKTIEIGDSVVVLRKLSSPAE 315



>AT5G44720.1 | chr5:18043086-18045275 FORWARD LENGTH=309
          Length = 308

 Score =  367 bits (941), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 176/299 (58%), Positives = 225/299 (75%), Gaps = 4/299 (1%)

Query: 22  VKSIVVYPIKSCRGISVPQAAITSTGLRWDRPWLVMNSAGRAFTQRVEPKLALIEVEMPQ 81
           ++S+V+YPIKSCRGISVPQA +T TG +WDR WLV+N  GRA+TQRVEP LAL+E E+P+
Sbjct: 7   IQSLVIYPIKSCRGISVPQATVTHTGFQWDRYWLVVNYKGRAYTQRVEPTLALVESELPK 66

Query: 82  EAFTE-WQPTPDSHMVIRAPGLDPLKIPLGAKRATVDDVSIWEWSGSAYDEGDEAAEWFS 140
           EAF E W+PT DS +VIRAPG+ PLKIPL    +  + VS+WEWSGSA+DEG+EAA+WFS
Sbjct: 67  EAFLEDWEPTNDSLLVIRAPGMSPLKIPLTRPSSVAEGVSMWEWSGSAFDEGEEAAKWFS 126

Query: 141 SYFGKPTRLVRFNEASEIRETNPDYAQGYKVLFADDFPFLLASQGSVDALNSILKEPVPM 200
            Y GK +RLVRFN+ +E R + P++A GY   F D FPFL+ASQGS+D LN++L EPVP+
Sbjct: 127 DYLGKQSRLVRFNKDTETRPSPPEFAAGYSTTFMDMFPFLVASQGSLDHLNTLLPEPVPI 186

Query: 201 NRFRPNIIVDGCHPYSEDLWKTIKIGKLTFLGVKLCDRCKVPTINQDNGIPGE-EPTEAL 259
           NRFRPNI+VD C P+ EDLW  IKI  L F GV+LC RCKVPT+NQ+ G+ G+ EPTE L
Sbjct: 187 NRFRPNILVDNCDPFGEDLWDEIKINDLVFQGVRLCSRCKVPTVNQETGVMGKAEPTETL 246

Query: 260 QALRSDEVLRPSHKNKRRVYFGQNLVCKESLS-AKDEG-RIIKVGDPVYVLESFPSSDE 316
              RSD VL P  K + +V+FG+ +V   +L+  + EG + IKVGD + V+   PS  E
Sbjct: 247 MKFRSDNVLMPDKKPRGKVFFGKEMVWNWNLTNTEGEGKKTIKVGDTISVIRKIPSRAE 305



>AT1G16540.1 | chr1:5659465-5665201 FORWARD LENGTH=820
          Length = 819

 Score =  115 bits (289), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 127/264 (48%), Gaps = 32/264 (12%)

Query: 22  VKSIVVYPIKSCRGISVPQAAITSTGLRWDRPWLVMNSAGRAFTQRVEPKLALIEVEMPQ 81
           +KSI VYPIKSC G SV +  +  TGL  DR W+V    G   TQ+  P+++LI+  +  
Sbjct: 531 LKSITVYPIKSCAGFSVIRWPLCRTGLLHDREWMVQGLTGEILTQKKVPEMSLIKTFIDL 590

Query: 82  EA---FTEWQPTPDS-HMVIRAPGLDPLKIPLGAKRATVDDVSIWEWSGSAYDEGDEAAE 137
           E      E     D  H+ I++   +P      +    +++           +E      
Sbjct: 591 EEGLLSVESSRCEDKLHIRIKSDSYNPRNDEFDSHANILEN----------RNEETRINR 640

Query: 138 WFSSYFGKPTRLVRFNEASEIRETNPDYAQGY------KVLFADDFPFLLASQGSVDALN 191
           WF++  G+  +L+R++ ++     N + + G        + FA++  FLL S+ SV  LN
Sbjct: 641 WFTNAIGRQCKLLRYSSSTSKDCLNRNKSPGLCRDLESNINFANEAQFLLISEESVADLN 700

Query: 192 SILK----------EPVPMNRFRPNIIVDGCHPYSEDLWKTIKIGKLTFLGVKLCDRCKV 241
             L+          E +  +RFRPN+++ G  PY ED WKT+KIG   F  +  C+RC++
Sbjct: 701 RRLEAKDEDYKRAHEKLNPHRFRPNLVISGGEPYGEDKWKTVKIGDNHFTSLGGCNRCQM 760

Query: 242 PTINQDNGI--PGEEPTEALQALR 263
             I+ + G+     EP   L + R
Sbjct: 761 INISNEAGLVKKSNEPLTTLASYR 784



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.317    0.136    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,025,433
Number of extensions: 301599
Number of successful extensions: 619
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 613
Number of HSP's successfully gapped: 3
Length of query: 319
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 220
Effective length of database: 8,392,385
Effective search space: 1846324700
Effective search space used: 1846324700
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 112 (47.8 bits)