BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0484900 Os09g0484900|AK067836
(543 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0484900 Sodium/sulphate symporter family protein 1056 0.0
Os08g0503700 Sodium/sulphate symporter family protein 788 0.0
>Os09g0484900 Sodium/sulphate symporter family protein
Length = 543
Score = 1056 bits (2731), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/543 (97%), Positives = 532/543 (97%)
Query: 1 MDPRRSHWESSSEDVTRPLLPLHDDDGAAGRRSCAALRSLLANKYLAVASGPVACALICG 60
MDPRRSHWESSSEDVTRPLLPLHDDDGAAGRRSCAALRSLLANKYLAVASGPVACALICG
Sbjct: 1 MDPRRSHWESSSEDVTRPLLPLHDDDGAAGRRSCAALRSLLANKYLAVASGPVACALICG 60
Query: 61 LVDLGGHRAARNMLGVLAWVFLWWITDAVPLAVASMAPLFLFPVFGISSSDAVAKAYMDD 120
LVDLGGHRAARNMLGVLAWVFLWWITDAVPLAVASMAPLFLFPVFGISSSDAVAKAYMDD
Sbjct: 61 LVDLGGHRAARNMLGVLAWVFLWWITDAVPLAVASMAPLFLFPVFGISSSDAVAKAYMDD 120
Query: 121 VISLVLGSFILALAIEHYNIHRRLALNITSLFCGDPVKPPLLLLGICGTTMFISMWIHNT 180
VISLVLGSFILALAIEHYNIHRRLALNITSLFCGDPVKPPLLLLGICGTTMFISMWIHNT
Sbjct: 121 VISLVLGSFILALAIEHYNIHRRLALNITSLFCGDPVKPPLLLLGICGTTMFISMWIHNT 180
Query: 181 PCTVMMMPVATGILQRFPRVDGXXXXXXXXXXXREVQRFSKAVVLGVVYASAIGGMATLT 240
PCTVMMMPVATGILQRFPRVDG REVQRFSKAVVLGVVYASAIGGMATLT
Sbjct: 181 PCTVMMMPVATGILQRFPRVDGASSSASSAADAREVQRFSKAVVLGVVYASAIGGMATLT 240
Query: 241 GTGVNIILVGMWSTYFPEQPPITFSSWMSFGLPLALVLFVALWATLCVLYCSKNTGRALS 300
GTGVNIILVGMWSTYFPEQPPITFSSWMSFGLPLALVLFVALWATLCVLYCSKNTGRALS
Sbjct: 241 GTGVNIILVGMWSTYFPEQPPITFSSWMSFGLPLALVLFVALWATLCVLYCSKNTGRALS 300
Query: 301 AYLDRSHLRRELSLLGPMAFAEKMVLAVFGGLIVLWMTRSLTDDIPGWGSLFHGEVGDGT 360
AYLDRSHLRRELSLLGPMAFAEKMVLAVFGGLIVLWMTRSLTDDIPGWGSLFHGEVGDGT
Sbjct: 301 AYLDRSHLRRELSLLGPMAFAEKMVLAVFGGLIVLWMTRSLTDDIPGWGSLFHGEVGDGT 360
Query: 361 VTIMMATLLFIIPSGKNDGEKLMDWGKCRRLQWNIILLLGAGFAIADGFRASGLTDILSE 420
VTIMMATLLFIIPSGKNDGEKLMDWGKCRRLQWNIILLLGAGFAIADGFRASGLTDILSE
Sbjct: 361 VTIMMATLLFIIPSGKNDGEKLMDWGKCRRLQWNIILLLGAGFAIADGFRASGLTDILSE 420
Query: 421 GLGFLRGAPALAIAPVACVFSGAITEFTSDDATATLVLPLLAELGKSIGVHPLLLMVPGA 480
GLGFLRGAPALAIAPVACVFSGAITEFTSDDATATLVLPLLAELGKSIGVHPLLLMVPGA
Sbjct: 421 GLGFLRGAPALAIAPVACVFSGAITEFTSDDATATLVLPLLAELGKSIGVHPLLLMVPGA 480
Query: 481 VGAQLSYLLPTGSPGNVVGFSTGYISIKDMVIAGTPLKIVGVAALTILLPTLGSVVFGMD 540
VGAQLSYLLPTGSPGNVVGFSTGYISIKDMVIAGTPLKIVGVAALTILLPTLGSVVFGMD
Sbjct: 481 VGAQLSYLLPTGSPGNVVGFSTGYISIKDMVIAGTPLKIVGVAALTILLPTLGSVVFGMD 540
Query: 541 QKL 543
QKL
Sbjct: 541 QKL 543
>Os08g0503700 Sodium/sulphate symporter family protein
Length = 548
Score = 788 bits (2035), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/553 (75%), Positives = 464/553 (83%), Gaps = 17/553 (3%)
Query: 1 MDPRRSHW-ESSSEDVTRPLLPLHDDDGAAGR---------RSCAALRSLLANKYLAVAS 50
MD S + ESSS+DV PLL G + + A +R+LLA+KY A+A+
Sbjct: 1 MDKNGSSYGESSSDDVEAPLLLPAARGGTMAKGDRRRPASSAAAAWVRALLAHKYPAIAA 60
Query: 51 GPVACALICGLVDLG-GHRAARNMLGVLAWVFLWWITDAVPLAVASMAPLFLFPVFGISS 109
GP ACA +C VDLG GH ARNMLGVLAWVFLWW+T AVPLAVASMAPLFLFP GISS
Sbjct: 61 GPAACAAVCAAVDLGDGHGEARNMLGVLAWVFLWWVTGAVPLAVASMAPLFLFPALGISS 120
Query: 110 SDAVAKAYMDDVISLVLGSFILALAIEHYNIHRRLALNITSLFCGDPVKPPLLLLGICGT 169
SD VA+AYM DVISLVLGSFILALA++H+ IHRRLALN+ SLFCGDPV+P LLLLG+ GT
Sbjct: 121 SDDVARAYMGDVISLVLGSFILALAVDHHRIHRRLALNVLSLFCGDPVRPSLLLLGVTGT 180
Query: 170 TMFISMWIHNTPCTVMMMPVATGILQRFPRVDGXXXXXXXXXXXREVQRFSKAVVLGVVY 229
T +SMWIHNT CTVMMMPVATGILQRFPR D +EV+RFSKAVVLGVVY
Sbjct: 181 TALVSMWIHNTACTVMMMPVATGILQRFPRGD------IDDGGGQEVRRFSKAVVLGVVY 234
Query: 230 ASAIGGMATLTGTGVNIILVGMWSTYFPEQPPITFSSWMSFGLPLALVLFVALWATLCVL 289
ASAIGGMATLTGTGVNIILVGMWS+YFPEQ PITFSSWMSFGLP+A++LF+ALW TLC++
Sbjct: 235 ASAIGGMATLTGTGVNIILVGMWSSYFPEQRPITFSSWMSFGLPMAIILFLALWLTLCLM 294
Query: 290 YCSKNTGRALSAYLDRSHLRRELSLLGPMAFAEKMVLAVFGGLIVLWMTRSLTDDIPGWG 349
YCS NT +ALSAYLDRSHLRRELSLLGPMAFAEKMVLAVFGGL+VLWM+R++TD+IPGWG
Sbjct: 295 YCSNNTAKALSAYLDRSHLRRELSLLGPMAFAEKMVLAVFGGLVVLWMSRNITDNIPGWG 354
Query: 350 SLFHGEVGDGTVTIMMATLLFIIPSGKNDGEKLMDWGKCRRLQWNIILLLGAGFAIADGF 409
LFH +VGDGTVTIMMATLLFIIPSGK +GEKLMDW KC+++QWNIILLLGAGFAIADGF
Sbjct: 355 VLFHNKVGDGTVTIMMATLLFIIPSGKREGEKLMDWNKCKKIQWNIILLLGAGFAIADGF 414
Query: 410 RASGLTDILSEGLGFLRGAPALAIAPVACVFSGAITEFTSDDATATLVLPLLAELGKSIG 469
+ SGLTDILS GL FL+GAP L I PVACVFSG +TEFTSDD+T TLVLPL AEL KSI
Sbjct: 415 KTSGLTDILSNGLRFLKGAPTLVIVPVACVFSGIMTEFTSDDSTTTLVLPLFAELAKSIE 474
Query: 470 VHPLLLMVPGAVGAQLSYLLPTGSPGNVVGFSTGYISIKDMVIAGTPLKIVGVAALTILL 529
VHP LLMV GA+GAQLSYLLPTGSP NVVGFSTGYI+IKD+V G PLKIV +AALT+LL
Sbjct: 475 VHPALLMVSGAIGAQLSYLLPTGSPSNVVGFSTGYITIKDLVATGLPLKIVAIAALTVLL 534
Query: 530 PTLGSVVFGMDQK 542
PTLGS +FGMD K
Sbjct: 535 PTLGSTIFGMDIK 547
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.141 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,193,917
Number of extensions: 827094
Number of successful extensions: 2652
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2648
Number of HSP's successfully gapped: 2
Length of query: 543
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 437
Effective length of database: 11,501,117
Effective search space: 5025988129
Effective search space used: 5025988129
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 158 (65.5 bits)