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Os08g0503700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Sodium/sulphate symporter family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.6 (0.0461) R2 : 0.939
β1 : -2.2 (0.169) R2dD : 0.0214 R2D : 0.0261
β2 : 5.95 (0.162) R2dC : 0.397 R2C : 0.755
β3 : -4.32 (0.187) R2dE : 0.157 R2E : 0.514
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.273 (0.0991) R2dN8 : 0.00155 R2N8 : -0.00127
σ : 0.862
deviance : 342.21
__
_____
C
peak time of C : 10.7
E
wheather : temperature
threshold : 13.02
memory length : 86
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 19.7
open length of G : 8.19

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
323.35 0.845 9.59 -2.14 6.36 -3.96 2.58 0.593 0.346 10.7 14.1 63 20 8.28
321.29 0.835 9.63 -2.29 6.23 -4 2.38 -- 0.253 10.7 12.61 67 19.9 8.33
336.9 0.855 9.58 -2.1 6.33 -4.01 -- -1.51 0.352 10.6 12.83 74 19.9 8.22
342.21 0.862 9.6 -2.2 5.95 -4.32 -- -- 0.273 10.7 13.02 86 19.7 8.19
436.86 0.973 9.79 -2.17 -- -8.69 -- -4.57 0.166 -- -40.86 276 16.4 10.1
607.25 1.16 9.62 -2.41 8.78 -- 2.81 -- 0.0236 11.3 -- -- -- --
641.17 1.19 9.62 -2.3 8.77 -- -- -- 0.0339 11.3 -- -- -- --
392.82 0.923 9.8 -1.81 -- -9.98 -- -- 0.125 -- -6.357 333 16.2 9.48
452.88 0.991 9.56 -- 5.93 -4.63 -- -- 0.562 10.7 14.22 94 19.6 8.27
5451.34 3.45 9.83 -2.52 -- -- -- -- -0.0487 -- -- -- -- --
780.48 1.31 9.56 -- 8.79 -- -- -- 0.29 11.3 -- -- -- --
495.21 1.04 9.75 -- -- -10 -- -- 0.293 -- -5.887 342 16.1 9.42
5618.68 3.5 9.77 -- -- -- -- -- 0.231 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 336.20 temperature 15.0 90 > th dose dependent rect. 20 8
3 339.85 temperature 10.0 270 > th dose dependent rect. 18 8
33 397.79 temperature 10.0 270 > th dose dependent rect. 2 5
34 398.34 precipitation 0.1 270 < th dose independent rect. 12 19
35 398.34 precipitation 0.1 270 < th dose dependent rect. 12 19
36 398.43 temperature 10.0 270 > th dose independent rect. 7 5
37 398.43 atmosphere 995.0 270 > th dose independent rect. 7 5
38 398.43 atmosphere 1015.0 270 < th dose independent rect. 7 5
39 398.43 temperature 10.0 270 > th dose independent rect. 12 19
40 398.55 precipitation 0.1 270 < th dose independent rect. 7 5
41 398.55 precipitation 0.1 270 < th dose dependent rect. 7 5
42 398.85 wind 9.0 270 < th dose independent rect. 7 5
43 400.21 wind 7.0 270 < th dose independent rect. 17 10
45 401.55 temperature 10.0 270 > th dose dependent rect. 3 3
46 401.57 precipitation 0.1 270 < th dose independent rect. 3 14
47 401.57 precipitation 0.1 270 < th dose dependent rect. 3 14
48 402.04 atmosphere 995.0 270 > th dose independent rect. 12 19
49 402.81 atmosphere 1010.0 90 < th dose independent rect. 20 8
50 402.87 wind 9.0 270 < th dose independent rect. 12 19
51 403.05 temperature 15.0 90 > th dose independent rect. 20 8
55 403.21 humidity 50.0 270 > th dose independent rect. 7 5
65 404.19 radiation 10.0 270 < th dose independent rect. 17 10
71 405.80 radiation 1.0 270 > th dose independent rect. 7 5
74 405.88 temperature 15.0 270 > th dose independent rect. 18 9
81 406.77 radiation 40.0 270 < th dose independent rect. 12 19
87 407.70 temperature 10.0 270 > th dose independent rect. 3 14
88 407.70 atmosphere 1015.0 270 < th dose independent rect. 3 14
91 408.05 radiation 40.0 270 < th dose dependent rect. 17 10
92 408.68 wind 1.0 270 > th dose independent rect. 7 5
94 408.93 temperature 15.0 270 > th dose independent rect. 7 18
100 410.46 humidity 50.0 270 > th dose independent rect. 17 10
101 410.65 precipitation 0.1 270 < th dose independent rect. 1 6
102 410.65 precipitation 0.1 270 < th dose dependent rect. 1 6
115 411.70 precipitation 0.1 270 < th dose independent rect. 17 10
116 411.70 precipitation 0.1 270 < th dose dependent rect. 17 10
128 413.47 wind 9.0 270 < th dose independent rect. 7 18
130 413.55 radiation 20.0 270 < th dose independent rect. 1 6
136 413.87 wind 9.0 270 < th dose independent rect. 3 14
137 414.03 humidity 70.0 270 > th dose independent rect. 1 6
138 414.08 wind 7.0 270 < th dose independent rect. 1 6
140 414.31 wind 5.0 30 < th dose independent rect. 20 8
143 414.67 radiation 10.0 270 < th dose independent rect. 3 3
147 414.91 radiation 1.0 10 < th dose dependent rect. 20 9
151 415.14 temperature 10.0 270 > th dose independent rect. 1 6
153 415.14 temperature 30.0 270 < th dose independent rect. 1 6
154 415.14 humidity 50.0 270 > th dose independent rect. 1 6
156 415.14 atmosphere 995.0 270 > th dose independent rect. 1 6
157 415.14 atmosphere 1015.0 270 < th dose independent rect. 1 6
175 415.64 precipitation 0.1 270 < th dose independent rect. 3 3
177 415.64 precipitation 0.1 270 < th dose dependent rect. 3 3
196 416.47 radiation 1.0 90 < th dose dependent rect. 20 8
200 416.49 temperature 30.0 90 < th dose independent rect. 20 8
201 416.49 humidity 50.0 90 > th dose independent rect. 20 8
204 416.49 atmosphere 995.0 90 > th dose independent rect. 20 8
205 416.49 radiation 1.0 90 < th dose independent rect. 20 8
210 416.49 temperature 10.0 90 > th dose independent rect. 4 16
211 416.49 atmosphere 1015.0 90 < th dose independent rect. 4 16
230 416.82 radiation 40.0 270 < th dose dependent rect. 2 5
232 416.92 wind 9.0 270 < th dose dependent rect. 2 5
234 417.17 precipitation 0.1 90 < th dose independent rect. 20 8
235 417.17 precipitation 0.1 90 < th dose dependent rect. 20 8
246 417.52 precipitation 0.1 270 < th dose independent rect. 7 18
247 417.52 precipitation 0.1 270 < th dose dependent rect. 7 18
256 417.73 atmosphere 1015.0 270 < th dose independent rect. 7 18
271 418.26 temperature 30.0 10 < th dose independent rect. 20 9
272 418.26 humidity 50.0 10 > th dose independent rect. 20 9
275 418.26 atmosphere 995.0 10 > th dose independent rect. 20 9
276 418.26 radiation 1.0 10 < th dose independent rect. 20 9
281 418.26 temperature 10.0 10 > th dose independent rect. 5 15
283 418.26 atmosphere 1015.0 10 < th dose independent rect. 5 15
287 418.44 humidity 50.0 270 > th dose dependent rect. 2 5
292 418.80 atmosphere 995.0 270 > th dose independent rect. 18 9
302 419.23 radiation 40.0 10 < th dose dependent rect. 5 15
322 419.61 wind 9.0 270 < th dose independent rect. 6 21
323 419.67 wind 9.0 90 < th dose independent rect. 4 16
327 419.81 atmosphere 995.0 270 > th dose dependent rect. 1 6
335 420.05 wind 7.0 270 < th dose independent rect. 3 3
339 420.17 atmosphere 1010.0 270 < th dose independent rect. 3 3
340 420.28 atmosphere 995.0 270 > th dose independent rect. 3 14
354 421.09 radiation 30.0 270 < th dose dependent rect. 3 3
362 421.31 temperature 10.0 270 > th dose independent rect. 3 3
364 421.31 temperature 30.0 270 < th dose independent rect. 3 3
365 421.31 humidity 50.0 270 > th dose independent rect. 3 3
368 421.31 atmosphere 995.0 270 > th dose independent rect. 3 3
373 421.31 temperature 10.0 270 > th dose independent rect. 6 21
397 422.28 temperature 15.0 30 > th dose independent rect. 20 17
401 422.67 atmosphere 1010.0 270 < th dose independent rect. 18 8
403 422.69 temperature 10.0 1440 > th dose independent rect. 21 8
406 422.69 temperature 30.0 1440 < th dose independent rect. 21 8
410 422.69 humidity 50.0 1440 > th dose independent rect. 21 8
416 422.69 atmosphere 995.0 1440 > th dose independent rect. 21 8
417 422.69 radiation 20.0 1440 < th dose independent rect. 21 8
429 422.69 temperature 10.0 1440 > th dose independent rect. 5 16
432 422.77 humidity 50.0 270 > th dose dependent rect. 3 3
434 422.81 radiation 20.0 10 < th dose independent rect. 5 15
488 424.46 wind 9.0 270 < th dose dependent rect. 3 3
494 424.56 temperature 10.0 270 > th dose independent rect. 9 1
495 424.56 atmosphere 995.0 270 > th dose independent rect. 9 1
496 424.56 atmosphere 1015.0 270 < th dose independent rect. 9 1
497 424.56 temperature 10.0 270 > th dose independent rect. 10 23
502 424.80 precipitation 0.1 270 < th dose independent rect. 9 1
503 424.80 precipitation 0.1 270 < th dose dependent rect. 9 1
513 425.14 wind 9.0 270 < th dose independent rect. 9 1
514 425.14 radiation 1.0 10 > th dose independent rect. 9 5
518 425.23 atmosphere 995.0 270 > th dose dependent rect. 3 3
526 425.59 precipitation 0.1 270 < th dose independent rect. 6 21
527 425.59 precipitation 0.1 270 < th dose dependent rect. 6 21
543 425.95 humidity 50.0 270 > th dose independent rect. 9 1
550 426.16 atmosphere 995.0 90 > th dose independent rect. 4 16
552 426.21 radiation 40.0 30 < th dose independent rect. 4 16
559 426.32 radiation 40.0 10 < th dose independent rect. 14 19
565 426.50 radiation 40.0 30 < th dose independent rect. 12 8
595 427.93 temperature 15.0 30 > th dose independent rect. 9 19
604 428.41 temperature 30.0 270 < th dose independent rect. 18 9
638 429.34 temperature 10.0 10 > th dose independent rect. 9 5
640 429.34 atmosphere 995.0 10 > th dose independent rect. 9 5
641 429.34 atmosphere 1015.0 10 < th dose independent rect. 9 5
642 429.34 precipitation 0.1 10 < th dose independent rect. 9 5
644 429.34 temperature 10.0 10 > th dose independent rect. 14 19
645 429.34 precipitation 0.1 10 < th dose dependent rect. 9 5
665 429.80 atmosphere 995.0 10 > th dose independent rect. 14 19
673 430.06 temperature 10.0 90 > th dose independent rect. 13 7
675 430.06 atmosphere 1010.0 90 < th dose independent rect. 13 7
678 430.06 atmosphere 995.0 90 > th dose independent rect. 20 17
687 430.42 precipitation 0.1 10 < th dose independent rect. 14 19
689 430.42 precipitation 0.1 10 < th dose dependent rect. 14 19
700 430.84 temperature 25.0 270 < th dose independent rect. 14 16
701 430.87 wind 9.0 10 < th dose independent rect. 9 5
702 430.87 atmosphere 1015.0 90 < th dose independent rect. 20 17
708 430.98 wind 9.0 30 < th dose dependent rect. 20 8
746 431.49 precipitation 0.1 90 < th dose independent rect. 13 7
747 431.49 precipitation 0.1 90 < th dose dependent rect. 13 7
753 431.65 wind 9.0 90 < th dose independent rect. 20 17
754 431.66 wind 1.0 270 > th dose independent rect. 9 1
761 431.81 radiation 1.0 270 > th dose independent rect. 9 1
765 431.94 wind 1.0 90 > th dose independent rect. 13 7
817 433.18 wind 9.0 10 < th dose independent rect. 14 19
821 433.26 wind 9.0 90 < th dose independent rect. 13 7
822 433.26 wind 1.0 270 > th dose independent rect. 12 19
827 433.41 precipitation 0.1 270 < th dose independent rect. 23 8
828 433.41 precipitation 0.1 270 < th dose dependent rect. 23 8
858 433.85 precipitation 0.1 90 < th dose independent rect. 20 17
859 433.85 precipitation 0.1 90 < th dose dependent rect. 20 17
869 434.26 atmosphere 995.0 90 > th dose independent rect. 13 7
874 434.44 wind 1.0 270 > th dose independent rect. 7 18
875 434.56 temperature 30.0 270 < th dose independent rect. 7 5
880 434.68 temperature 10.0 1440 > th dose independent rect. 10 5
883 434.68 temperature 10.0 1440 > th dose independent rect. 15 19
892 434.88 wind 1.0 30 > th dose independent rect. 9 5
902 435.36 humidity 50.0 270 > th dose independent rect. 13 18
916 435.67 temperature 10.0 1440 > th dose independent rect. 14 7
919 435.67 temperature 10.0 1440 > th dose independent rect. 21 17
922 435.67 atmosphere 995.0 1440 > th dose independent rect. 21 17
923 435.67 atmosphere 995.0 270 > th dose independent rect. 7 18
927 435.81 atmosphere 1015.0 270 < th dose independent rect. 7 16
956 436.28 humidity 70.0 30 > th dose independent rect. 4 5
963 436.48 wind 9.0 270 < th dose independent rect. 7 15
968 436.54 radiation 20.0 270 < th dose independent rect. 22 9
988 436.99 humidity 70.0 270 > th dose independent rect. 22 9
997 437.15 wind 7.0 270 < th dose independent rect. 23 8