Os09g0484900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sodium/sulphate symporter family protein.
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Os09g0484900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sodium/sulphate symporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 534.59 | 1.09 | 8.91 | -2.49 | 8.85 | 5.54 | 4.09 | -3.88 | -0.27 | 8.55 | 26.7 | 259 | 9.85 | -- |
| 543.22 | 1.09 | 8.93 | -2.93 | 8.75 | 5.89 | 5.54 | -- | -0.316 | 8.62 | 26.3 | 210 | 8.81 | -- |
| 559.43 | 1.1 | 8.86 | -1.99 | 9.54 | 5.54 | -- | -8.29 | -0.266 | 8.74 | 29.83 | 224 | 9.49 | -- |
| 641.7 | 1.18 | 8.93 | -2.69 | 8.85 | 6.14 | -- | -- | -0.306 | 8.51 | 25.87 | 204 | 9.33 | -- |
| 1046.46 | 1.51 | 9.6 | -2.15 | -- | 7.75 | -- | 2.6 | -1.72 | -- | 148.5 | 189 | 9.68e-07 | -- |
| 831.45 | 1.35 | 9.13 | -3.65 | 8.11 | -- | 6.39 | -- | -1.06 | 8.02 | -- | -- | -- | -- |
| 950.16 | 1.44 | 9.13 | -3.48 | 8.13 | -- | -- | -- | -1.07 | 7.92 | -- | -- | -- | -- |
| 931.87 | 1.42 | 9.33 | -3.35 | -- | 8.58 | -- | -- | -0.908 | -- | 111.4 | 347 | 0.909 | -- |
| 818.08 | 1.33 | 8.85 | -- | 8.96 | 7.09 | -- | -- | 0.0622 | 8.54 | 25.8 | 239 | 10.2 | -- |
| 4546.37 | 3.15 | 9.33 | -3.4 | -- | -- | -- | -- | -0.965 | -- | -- | -- | -- | -- |
| 1269.79 | 1.67 | 9.04 | -- | 8.11 | -- | -- | -- | -0.685 | 7.95 | -- | -- | -- | -- |
| 1076.66 | 1.53 | 9.06 | -- | -- | 11.2 | -- | -- | -0.00347 | -- | 59.22 | 964 | 6.42 | -- |
| 4850.48 | 3.25 | 9.25 | -- | -- | -- | -- | -- | -0.588 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 538.67 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 13 |
| 5 | 546.54 | temperature | 30 | 270 | < th | dose dependent | sin | 15 | NA |
| 6 | 547.04 | temperature | 30 | 90 | < th | dose dependent | sin | 13 | NA |
| 16 | 549.76 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 19 | 549.94 | temperature | 25 | 10 | < th | dose dependent | sin | 14 | NA |
| 59 | 556.39 | temperature | 25 | 270 | < th | dose independent | sin | 16 | NA |
| 118 | 567.00 | temperature | 25 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 124 | 568.25 | temperature | 25 | 270 | < th | dose independent | rect. | 15 | 12 |
| 263 | 587.57 | temperature | 10 | 90 | > th | dose dependent | sin | 12 | NA |
| 270 | 588.44 | temperature | 25 | 270 | > th | dose independent | sin | 18 | NA |
| 309 | 592.60 | temperature | 10 | 10 | > th | dose dependent | sin | 11 | NA |
| 328 | 594.97 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 11 |
| 362 | 597.62 | temperature | 25 | 720 | < th | dose independent | rect. | 9 | 14 |
| 380 | 598.93 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 5 |
| 442 | 603.83 | temperature | 25 | 720 | < th | dose independent | rect. | 13 | 8 |
| 543 | 609.51 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 5 |
| 617 | 612.45 | temperature | 10 | 270 | > th | dose dependent | sin | 18 | NA |
| 623 | 612.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 669 | 615.03 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 760 | 619.38 | temperature | 25 | 270 | > th | dose independent | rect. | 7 | 18 |
| 883 | 625.45 | temperature | 10 | 30 | > th | dose dependent | sin | 16 | NA |
| 924 | 627.40 | temperature | 20 | 270 | > th | dose dependent | rect. | 14 | 10 |