BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0472900 Os09g0472900|AK063132
         (134 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0472900  Similar to Blight-associated protein p12 precu...   224   1e-59
Os09g0472700  Barwin-related endoglucanase domain containing...   201   1e-52
Os09g0473200                                                      161   1e-40
Os06g0688200                                                      130   2e-31
Os08g0485800  Expansin/Lol pI family protein                      113   3e-26

>Os09g0472900 Similar to Blight-associated protein p12 precursor
          Length = 134

 Score =  224 bits (572), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 111/134 (82%), Positives = 111/134 (82%)

Query: 1   MTTMXXXXXXXXXXXXXXXXXXXXXXXDSGTATFYTPPYTPSACYGFEDQGTMIAAASDV 60
           MTTM                       DSGTATFYTPPYTPSACYGFEDQGTMIAAASDV
Sbjct: 1   MTTMAKVITSVVIAAVVALAMVSLVAADSGTATFYTPPYTPSACYGFEDQGTMIAAASDV 60

Query: 61  FWNGGAACGQQYVVTCTGPTNQGVPQPCTGQSVTVKIVDHCPSGCAGTIDLSQEAFAIIA 120
           FWNGGAACGQQYVVTCTGPTNQGVPQPCTGQSVTVKIVDHCPSGCAGTIDLSQEAFAIIA
Sbjct: 61  FWNGGAACGQQYVVTCTGPTNQGVPQPCTGQSVTVKIVDHCPSGCAGTIDLSQEAFAIIA 120

Query: 121 NPDAGKVFIDYQQV 134
           NPDAGKVFIDYQQV
Sbjct: 121 NPDAGKVFIDYQQV 134



>Os09g0472700 Barwin-related endoglucanase domain containing protein
          Length = 130

 Score =  201 bits (512), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/106 (88%), Positives = 103/106 (97%)

Query: 29  SGTATFYTPPYTPSACYGFEDQGTMIAAASDVFWNGGAACGQQYVVTCTGPTNQGVPQPC 88
           SGTATFYTPPYTPSAC+GF++QGTMIAAASDVFWNGGAACG++YVVTCTG TNQGVP+PC
Sbjct: 25  SGTATFYTPPYTPSACFGFQEQGTMIAAASDVFWNGGAACGKRYVVTCTGATNQGVPRPC 84

Query: 89  TGQSVTVKIVDHCPSGCAGTIDLSQEAFAIIANPDAGKVFIDYQQV 134
           TG+SVTVKIVDHCPSGC GTIDLSQEAFAIIANPDAGK+ IDY+QV
Sbjct: 85  TGRSVTVKIVDHCPSGCQGTIDLSQEAFAIIANPDAGKIKIDYRQV 130



>Os09g0473200 
          Length = 97

 Score =  161 bits (408), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 73/93 (78%), Positives = 85/93 (91%)

Query: 42  SACYGFEDQGTMIAAASDVFWNGGAACGQQYVVTCTGPTNQGVPQPCTGQSVTVKIVDHC 101
           SAC+GF++QGTM AAASDVFWNGGAACG++  VTCTG TNQGVPQPCTG+SVTVKIVD+C
Sbjct: 5   SACFGFQEQGTMTAAASDVFWNGGAACGKRLAVTCTGATNQGVPQPCTGRSVTVKIVDYC 64

Query: 102 PSGCAGTIDLSQEAFAIIANPDAGKVFIDYQQV 134
           P+GC GTIDLSQEAFA IANPDAGK+ ++Y +V
Sbjct: 65  PAGCRGTIDLSQEAFAAIANPDAGKILVEYHEV 97



>Os06g0688200 
          Length = 142

 Score =  130 bits (327), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/120 (60%), Positives = 80/120 (66%), Gaps = 17/120 (14%)

Query: 30  GTATFYTPPYT--------------PSACYGFEDQGTMIAAASDVFWNGGAACGQQYVVT 75
           GTATFYT  YT               SACYGF+DQGTMIAAASD  W+GG ACG+ Y V 
Sbjct: 25  GTATFYTV-YTRTSPNCSLILNDVFASACYGFQDQGTMIAAASDGLWDGGRACGRMYTVR 83

Query: 76  CTGPTNQGVPQPCTGQSVTVKIVDHCPS-GCAGTIDLSQEAFAIIANPDAGKVFIDYQQV 134
           C   TN  VP PC G +VTVKIVD CPS GC  T+DLS+EAFA I N DAG++ IDY QV
Sbjct: 84  CVRGTN-AVPNPCNGGTVTVKIVDRCPSPGCTSTLDLSREAFAAIGNLDAGRIVIDYNQV 142



>Os08g0485800 Expansin/Lol pI family protein
          Length = 137

 Score =  113 bits (283), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 62/107 (57%), Positives = 71/107 (66%), Gaps = 4/107 (3%)

Query: 29  SGTATFYTPPYTPSACYGFEDQGTMIAAASDVFWNGGAACGQQYVVTC-TGPTNQGVPQP 87
           SG ATFYT  YTPSACYG  + G M+AAA+D  +N GA CG+ Y V C       G   P
Sbjct: 27  SGVATFYTQ-YTPSACYGNRNMGNMVAAANDRLYNNGAVCGRCYAVKCAGAAAGGGGGNP 85

Query: 88  CTGQSVTVKIVDHCPS--GCAGTIDLSQEAFAIIANPDAGKVFIDYQ 132
           CTG SVTVK+VD+C S  GC  TIDLS+EAFA IAN DAG + I Y 
Sbjct: 86  CTGASVTVKMVDNCASSDGCTSTIDLSREAFAKIANLDAGVIRITYN 132



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.318    0.133    0.427 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,357,236
Number of extensions: 171751
Number of successful extensions: 455
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 455
Number of HSP's successfully gapped: 5
Length of query: 134
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 44
Effective length of database: 12,336,541
Effective search space: 542807804
Effective search space used: 542807804
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 150 (62.4 bits)