Os09g0472700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Barwin-related endoglucanase domain containing protein.
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Os09g0472700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Barwin-related endoglucanase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 353.77 | 0.884 | 8.01 | -0.656 | 2.39 | 5.54 | 0.651 | 20.5 | 1.21 | 7.19 | 1.507 | 6576 | 17.2 | 12.8 |
| 592.12 | 1.13 | 7.17 | -0.256 | 2.31 | 5.16 | 1.75 | -- | 1.65 | 6.85 | -4.722 | 11428 | 16.4 | 13.1 |
| 353.17 | 0.875 | 8.01 | -0.548 | 2.38 | 5.79 | -- | 20.8 | 1.24 | 7.23 | 1.67 | 6579 | 17.2 | 12.8 |
| 553.68 | 1.1 | 7.3 | -0.871 | 2.15 | 5.01 | -- | -- | 1.36 | 6.46 | -5.494 | 11423 | 16.4 | 12.2 |
| 644.89 | 1.18 | 8.05 | -0.175 | -- | 5.98 | -- | 21.1 | 1.23 | -- | 1.363 | 6844 | 17.3 | 12.7 |
| 972.4 | 1.46 | 7.11 | -3.26 | 2.52 | -- | 0.857 | -- | 1.83 | 6.73 | -- | -- | -- | -- |
| 974.26 | 1.46 | 7.11 | -3.25 | 2.53 | -- | -- | -- | 1.82 | 6.74 | -- | -- | -- | -- |
| 558.41 | 1.1 | 7.29 | -1.43 | -- | 6.15 | -- | -- | 1.38 | -- | -7.137 | 12529 | 16.8 | 11.9 |
| 548.16 | 1.09 | 7.3 | -- | 2.06 | 5.61 | -- | -- | 1.53 | 6.21 | -5.275 | 11438 | 16.9 | 11.8 |
| 1307.45 | 1.69 | 7.17 | -3.19 | -- | -- | -- | -- | 1.87 | -- | -- | -- | -- | -- |
| 1252.02 | 1.66 | 7.03 | -- | 2.49 | -- | -- | -- | 2.19 | 6.82 | -- | -- | -- | -- |
| 551.4 | 1.09 | 7.28 | -- | -- | 6.97 | -- | -- | 1.6 | -- | -6.086 | 11168 | 16.7 | 11.8 |
| 1575.7 | 1.85 | 7.09 | -- | -- | -- | -- | -- | 2.23 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 354.96 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 3 | 355.24 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 14 |
| 20 | 361.55 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 10 |
| 25 | 362.24 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 38 | 364.78 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 43 | 366.29 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 51 | 366.43 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 65 | 372.90 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 66 | 372.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 67 | 372.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 68 | 373.65 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 69 | 373.89 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 72 | 375.11 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 83 | 375.93 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 1 | 5 |
| 88 | 376.18 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 116 | 377.65 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 118 | 377.88 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 142 | 378.60 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 157 | 380.83 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 173 | 381.94 | radiation | 1.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 186 | 383.89 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 194 | 384.12 | radiation | 1.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 228 | 386.85 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 22 |
| 273 | 388.08 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 274 | 388.26 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 5 |
| 297 | 389.97 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 8 | 22 |
| 319 | 391.34 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 331 | 392.13 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 342 | 392.32 | wind | 5.0 | 43200 | > th | dose independent | rect. | 5 | 9 |
| 358 | 393.14 | wind | 5.0 | 43200 | < th | dose independent | sin | 4 | NA |
| 376 | 393.65 | wind | 5.0 | 43200 | > th | dose independent | sin | 4 | NA |
| 399 | 394.87 | radiation | 30.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 426 | 395.46 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 428 | 395.53 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 429 | 395.60 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 456 | 396.61 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 457 | 396.61 | wind | 5.0 | 43200 | > th | dose independent | rect. | 4 | 11 |
| 461 | 396.75 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 20 |
| 472 | 397.19 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 20 |
| 475 | 397.27 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 477 | 397.28 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 23 | 21 |
| 484 | 397.31 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 16 |
| 490 | 397.31 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 508 | 397.35 | radiation | 1.0 | 14400 | < th | dose independent | no | NA | NA |
| 512 | 397.35 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 599 | 398.54 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 625 | 399.31 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 626 | 399.33 | wind | 5.0 | 43200 | < th | dose independent | rect. | 24 | 15 |
| 635 | 399.65 | wind | 5.0 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 642 | 399.99 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 656 | 400.30 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 665 | 400.39 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 8 | 16 |
| 671 | 400.43 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 699 | 400.69 | radiation | 1.0 | 14400 | > th | dose independent | no | NA | NA |
| 700 | 400.69 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 4 | 15 |
| 753 | 400.91 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 755 | 400.93 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 7 | 6 |
| 931 | 404.14 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 944 | 404.80 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 972 | 405.38 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 17 |
| 974 | 405.40 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 975 | 405.40 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 987 | 405.57 | radiation | 1.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 989 | 405.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 5 |