BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os09g0472700 Os09g0472700|Os09g0472700
         (130 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os09g0472700  Barwin-related endoglucanase domain containing...   229   6e-61
Os09g0472900  Similar to Blight-associated protein p12 precu...   201   1e-52
Os09g0473200                                                      170   2e-43
Os06g0688200                                                      129   4e-31
Os08g0485800  Expansin/Lol pI family protein                      113   4e-26

>Os09g0472700 Barwin-related endoglucanase domain containing protein
          Length = 130

 Score =  229 bits (583), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 112/130 (86%), Positives = 112/130 (86%)

Query: 1   MPKVTXXXXXXXXXXXXXXXXXXISGTATFYTPPYTPSACFGFQEQGTMIAAASDVFWNG 60
           MPKVT                  ISGTATFYTPPYTPSACFGFQEQGTMIAAASDVFWNG
Sbjct: 1   MPKVTSVVMAAVVGLAMVSLVAGISGTATFYTPPYTPSACFGFQEQGTMIAAASDVFWNG 60

Query: 61  GAACGKRYVVTCTGATNQGVPRPCTGRSVTVKIVDHCPSGCQGTIDLSQEAFAIIANPDA 120
           GAACGKRYVVTCTGATNQGVPRPCTGRSVTVKIVDHCPSGCQGTIDLSQEAFAIIANPDA
Sbjct: 61  GAACGKRYVVTCTGATNQGVPRPCTGRSVTVKIVDHCPSGCQGTIDLSQEAFAIIANPDA 120

Query: 121 GKIKIDYRQV 130
           GKIKIDYRQV
Sbjct: 121 GKIKIDYRQV 130



>Os09g0472900 Similar to Blight-associated protein p12 precursor
          Length = 134

 Score =  201 bits (510), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 94/106 (88%), Positives = 103/106 (97%)

Query: 25  SGTATFYTPPYTPSACFGFQEQGTMIAAASDVFWNGGAACGKRYVVTCTGATNQGVPRPC 84
           SGTATFYTPPYTPSAC+GF++QGTMIAAASDVFWNGGAACG++YVVTCTG TNQGVP+PC
Sbjct: 29  SGTATFYTPPYTPSACYGFEDQGTMIAAASDVFWNGGAACGQQYVVTCTGPTNQGVPQPC 88

Query: 85  TGRSVTVKIVDHCPSGCQGTIDLSQEAFAIIANPDAGKIKIDYRQV 130
           TG+SVTVKIVDHCPSGC GTIDLSQEAFAIIANPDAGK+ IDY+QV
Sbjct: 89  TGQSVTVKIVDHCPSGCAGTIDLSQEAFAIIANPDAGKVFIDYQQV 134



>Os09g0473200 
          Length = 97

 Score =  170 bits (431), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 80/93 (86%), Positives = 87/93 (93%)

Query: 38  SACFGFQEQGTMIAAASDVFWNGGAACGKRYVVTCTGATNQGVPRPCTGRSVTVKIVDHC 97
           SACFGFQEQGTM AAASDVFWNGGAACGKR  VTCTGATNQGVP+PCTGRSVTVKIVD+C
Sbjct: 5   SACFGFQEQGTMTAAASDVFWNGGAACGKRLAVTCTGATNQGVPQPCTGRSVTVKIVDYC 64

Query: 98  PSGCQGTIDLSQEAFAIIANPDAGKIKIDYRQV 130
           P+GC+GTIDLSQEAFA IANPDAGKI ++Y +V
Sbjct: 65  PAGCRGTIDLSQEAFAAIANPDAGKILVEYHEV 97



>Os06g0688200 
          Length = 142

 Score =  129 bits (325), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 73/122 (59%), Positives = 81/122 (66%), Gaps = 17/122 (13%)

Query: 24  ISGTATFYTPPYT--------------PSACFGFQEQGTMIAAASDVFWNGGAACGKRYV 69
           I GTATFYT  YT               SAC+GFQ+QGTMIAAASD  W+GG ACG+ Y 
Sbjct: 23  IEGTATFYTV-YTRTSPNCSLILNDVFASACYGFQDQGTMIAAASDGLWDGGRACGRMYT 81

Query: 70  VTCTGATNQGVPRPCTGRSVTVKIVDHCPS-GCQGTIDLSQEAFAIIANPDAGKIKIDYR 128
           V C   TN  VP PC G +VTVKIVD CPS GC  T+DLS+EAFA I N DAG+I IDY 
Sbjct: 82  VRCVRGTN-AVPNPCNGGTVTVKIVDRCPSPGCTSTLDLSREAFAAIGNLDAGRIVIDYN 140

Query: 129 QV 130
           QV
Sbjct: 141 QV 142



>Os08g0485800 Expansin/Lol pI family protein
          Length = 137

 Score =  113 bits (282), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 63/106 (59%), Positives = 73/106 (68%), Gaps = 4/106 (3%)

Query: 25  SGTATFYTPPYTPSACFGFQEQGTMIAAASDVFWNGGAACGKRYVVTC-TGATNQGVPRP 83
           SG ATFYT  YTPSAC+G +  G M+AAA+D  +N GA CG+ Y V C   A   G   P
Sbjct: 27  SGVATFYTQ-YTPSACYGNRNMGNMVAAANDRLYNNGAVCGRCYAVKCAGAAAGGGGGNP 85

Query: 84  CTGRSVTVKIVDHCPS--GCQGTIDLSQEAFAIIANPDAGKIKIDY 127
           CTG SVTVK+VD+C S  GC  TIDLS+EAFA IAN DAG I+I Y
Sbjct: 86  CTGASVTVKMVDNCASSDGCTSTIDLSREAFAKIANLDAGVIRITY 131



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.320    0.135    0.432 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,335,489
Number of extensions: 172113
Number of successful extensions: 416
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 417
Number of HSP's successfully gapped: 5
Length of query: 130
Length of database: 17,035,801
Length adjustment: 89
Effective length of query: 41
Effective length of database: 12,388,755
Effective search space: 507938955
Effective search space used: 507938955
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 150 (62.4 bits)