BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0492400 Os08g0492400|J065134F04
(533 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0492400 C2 calcium/lipid-binding region, CaLB domain c... 1073 0.0
Os06g0297800 Similar to No pollen 452 e-127
Os06g0607900 No pollen 395 e-110
Os02g0199800 Similar to No pollen 382 e-106
Os04g0476600 C2 calcium/lipid-binding region, CaLB domain c... 239 4e-63
>Os08g0492400 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 533
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/533 (97%), Positives = 521/533 (97%)
Query: 1 GEICVAMSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVALSYQESEACQEESVN 60
GEICVAMSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVALSYQESEACQEESVN
Sbjct: 1 GEICVAMSLETAGATRSWSDDLVSELTDIQKDYSLSSQGTGTSVALSYQESEACQEESVN 60
Query: 61 GNLGRAGFTEEDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNKPSFVDRVCQM 120
GNLGRAGFTEEDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNKPSFVDRVCQM
Sbjct: 61 GNLGRAGFTEEDNCSQDTDRNQTTAEDKSNGIPAAASTGIEVSKTDKSNKPSFVDRVCQM 120
Query: 121 FVRKSXXXXXXXXXXXXKSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQE 180
FVRKS KSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQE
Sbjct: 121 FVRKSDDVVTTPLVTTDKSEDVQEATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQE 180
Query: 181 VEMPVDLQGILVDKSYITSPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDGES 240
VEMPVDLQGILVDKSYITSPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDGES
Sbjct: 181 VEMPVDLQGILVDKSYITSPSDLNNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDGES 240
Query: 241 LKRVITYTTAPSKLVKAVKATEEQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRIL 300
LKRVITYTTAPSKLVKAVKATEEQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRIL
Sbjct: 241 LKRVITYTTAPSKLVKAVKATEEQSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRIL 300
Query: 301 PGPELDSEQLTSHLVISWRINFLQSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDV 360
PGPELDSEQLTSHLVISWRINFLQSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDV
Sbjct: 301 PGPELDSEQLTSHLVISWRINFLQSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDV 360
Query: 361 DAGSDKGQVLASLQRGQESDWNIAFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEF 420
DAGSDKGQVLASLQRGQESDWNIAFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEF
Sbjct: 361 DAGSDKGQVLASLQRGQESDWNIAFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEF 420
Query: 421 PGLDLPDSLSEIVMGGLLFLQLRHIYKKISCFIQAREQKVGDHGVKAQGDGWLLTVALIE 480
PGLDLPDSLSEIVMGGLLFLQLRHIYKKISCFIQAREQKVGDHGVKAQGDGWLLTVALIE
Sbjct: 421 PGLDLPDSLSEIVMGGLLFLQLRHIYKKISCFIQAREQKVGDHGVKAQGDGWLLTVALIE 480
Query: 481 GTKLAPVDATGFSDPYVVFTCNGKSKTSSIKFQTLEPQWNGMCLALQFKFFPF 533
GTKLAPVDATGFSDPYVVFTCNGKSKTSSIKFQTLEPQWNGMCLALQFKFFPF
Sbjct: 481 GTKLAPVDATGFSDPYVVFTCNGKSKTSSIKFQTLEPQWNGMCLALQFKFFPF 533
>Os06g0297800 Similar to No pollen
Length = 1037
Score = 452 bits (1163), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/437 (52%), Positives = 301/437 (68%), Gaps = 8/437 (1%)
Query: 92 IPAAASTG--IEVSKTDKSNK-PSFVDRVCQMFVRKSXXXXXXXXXXXXKS----EDVQE 144
IP + S G E+ K D+SN PSFV+R+ Q F K + D+ E
Sbjct: 168 IPTSVSGGDETEIIKEDRSNGVPSFVNRLYQFFSAKPKDAEASASAPPLTTGDGNSDILE 227
Query: 145 ATTGYEAPATGSQTYSASTDTPFDELLKYFESKHQEVEMPVDLQG-ILVDKSYITSPSDL 203
T + +Q Y FDE LK F S H+ E+P +L G +L+D+ Y +PSDL
Sbjct: 228 ETPSTSSELPDNQDYETGVTMSFDEQLKAFGSCHEGNEIPENLSGGVLIDQVYAVAPSDL 287
Query: 204 NNFLFSPDSNFRQTVVELQGCSDVKMESWKIDSDGESLKRVITYTTAPSKLVKAVKATEE 263
N LFSP S+F Q++ E+QG + ++++ W++++DGE LKRV++YT AP+ LVKAVKATE+
Sbjct: 288 NGLLFSPSSDFLQSLAEMQGTTGLEIQQWRLENDGEVLKRVVSYTKAPTALVKAVKATED 347
Query: 264 QSYLKADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPGPELDSEQLTSHLVISWRINFL 323
SYLKADG+ Y+ L VSTPDVP G FR E+L I+PGPEL + +S LV+SWR+NF+
Sbjct: 348 VSYLKADGDIYATLADVSTPDVPFGNSFRVEVLTCIMPGPELPDNEKSSRLVVSWRLNFI 407
Query: 324 QSTMMKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDVDAGSDKGQVLASLQRGQESDWNI 383
QSTMMKGMIENGAKQGL+ NY QFS+LL++ I+P+D + +VL+S+Q QESDW +
Sbjct: 408 QSTMMKGMIENGAKQGLKDNYIQFSELLARNIRPVDSKDAAATDKVLSSVQPEQESDWKL 467
Query: 384 AFLYFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLLFLQLR 443
AF F NF V+ SL IY+ H+ L S +GLEFPGLDLPDS+ E+V+ G+L LQ +
Sbjct: 468 AFRIFGNFTVVSSLVAFIYVFSHIILASPSIIQGLEFPGLDLPDSVGEVVVCGVLVLQGQ 527
Query: 444 HIYKKISCFIQAREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVFTCNG 503
+ I+ FIQA+ Q+ DHGVKAQG+GWLLTVALI+GT LA ++G+SDPYVVFTCNG
Sbjct: 528 RVLNMIARFIQAKRQRGSDHGVKAQGNGWLLTVALIDGTNLAATKSSGYSDPYVVFTCNG 587
Query: 504 KSKTSSIKFQTLEPQWN 520
K+KTSSIKF TLEP+WN
Sbjct: 588 KTKTSSIKFHTLEPRWN 604
>Os06g0607900 No pollen
Length = 1086
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/374 (52%), Positives = 263/374 (70%), Gaps = 7/374 (1%)
Query: 149 YEAPATGSQTYSASTDTPFDELLKYFESKHQEVEMPVDLQG-ILVDKSYITSPSDLNNFL 207
+E P +G+ S+++ DELLK ESK Q EMP +L G +L+D+SY+ +P++LN+ L
Sbjct: 284 HETPESGT-----SSESSLDELLKTMESKDQGCEMPANLPGGVLIDESYVAAPTELNSLL 338
Query: 208 FSPDSNFRQTVVELQGCSDVKMESWKIDSDGESLKRVITYTTAPSKLVKAVKATEEQSYL 267
FS +S+F V ELQG S ++E WK+D++ L+R +TYT A SKLVKAVKATEEQ YL
Sbjct: 339 FSKNSDFWPAVSELQGTSGFQIEPWKLDNNETCLQRTLTYTKAASKLVKAVKATEEQKYL 398
Query: 268 KADGNGYSVLLSVSTPDVPCGTYFRTEILFRILPGPELDSEQLTSHLVISWRINFLQSTM 327
KA GN ++V VSTPDVPCG F+ EIL+ I PGP L SE+ TSHL +SWR+NF+QSTM
Sbjct: 399 KAAGNSFAVHSVVSTPDVPCGGCFKIEILYCITPGPSLSSEEQTSHLTVSWRVNFVQSTM 458
Query: 328 MKGMIENGAKQGLQQNYAQFSDLLSQKIKPIDV-DAGSDKGQVLASLQRGQESDWNIAFL 386
MKGMIE+GAKQG+ + +A FS++LSQKIK + DA S+K ++L+SL +ES W +
Sbjct: 459 MKGMIESGAKQGMAEGFAHFSEILSQKIKVAEADDANSNKEKILSSLHAQKESGWRLIVR 518
Query: 387 YFCNFGVLCSLFVTIYIAVHVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLLFLQLRHIY 446
+ NF + S+ + Y+ H+ L A GLE+ G+DLPDS+ E+V+ +L LQ ++I+
Sbjct: 519 FLFNFTFIFSVIIASYVIAHLHLSKPNAMHGLEYFGIDLPDSIGEVVVCAVLILQGQNIF 578
Query: 447 KKISCFIQAREQKVGDHGVKAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVFTCNGKSK 506
I F+ A +QK DHGVKA GDGWL+TVALIEGT + ++ D Y VFTCN K K
Sbjct: 579 NIIKRFLNAWKQKGSDHGVKAHGDGWLMTVALIEGTGITNSNSKELFDMYAVFTCNAKRK 638
Query: 507 TSSIKFQTLEPQWN 520
TSS+KFQT EP+WN
Sbjct: 639 TSSVKFQTSEPKWN 652
>Os02g0199800 Similar to No pollen
Length = 1111
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/415 (48%), Positives = 275/415 (66%), Gaps = 8/415 (1%)
Query: 108 SNKPSFVDRVCQMFVRKSXXXXXXXXXXXXKSEDVQEATTGYEAPATGSQTYSASTDTPF 167
+N S V+ + + F RK + +D Q + E G A +T
Sbjct: 270 TNASSVVEVMSRYFCRKPVDAAPSATSDHEQFQDTQMNSESCENGDNG-----ALPETSL 324
Query: 168 DELLKYFESKHQEVEMPVDLQG-ILVDKSYITSPSDLNNFLFSPDSNFRQTVVELQGCSD 226
+EL+K ESK + EMP +L+G ILVD+SY+ P+++N+ LFS S+F V E+QG S
Sbjct: 325 NELMKSLESKDKGSEMPENLRGGILVDQSYVLQPTEMNSMLFSAHSDFWPAVAEVQGLSG 384
Query: 227 VKMESWKIDSDGESLKRVITYTTAPSKLVKAVKATEEQSYLKADGNGYSVLLSVSTPDVP 286
+ + WK+ S+ + LKR ++YT A SKLVKAVK TEEQ+YLKA GN ++VL SVS+P+VP
Sbjct: 385 FQTDPWKLVSN-DCLKRTLSYTKAASKLVKAVKITEEQTYLKAAGNSFAVLSSVSSPEVP 443
Query: 287 CGTYFRTEILFRILPGPELDSEQLTSHLVISWRINFLQSTMMKGMIENGAKQGLQQNYAQ 346
CG F+ EIL+ I PGP+L S++ TSHL ISWR+NF+QSTM+KGMIE+G KQGL++ YAQ
Sbjct: 444 CGNCFKVEILYCITPGPQLPSKEQTSHLTISWRLNFVQSTMLKGMIESGTKQGLREGYAQ 503
Query: 347 FSDLLSQKIKPIDV-DAGSDKGQVLASLQRGQESDWNIAFLYFCNFGVLCSLFVTIYIAV 405
F+++LSQK K I D+ K ++L+SLQ +ES W +A + NF + SL + +Y
Sbjct: 504 FTEVLSQKTKVIAPDDSNLSKDEILSSLQTQEESIWKLAARFLGNFAFIFSLCIALYATA 563
Query: 406 HVQLRSSGAHKGLEFPGLDLPDSLSEIVMGGLLFLQLRHIYKKISCFIQAREQKVGDHGV 465
H++L GLE+ G+DLPDS+ E+V +L +Q ++I+K F+ A +Q+ DHGV
Sbjct: 564 HLRLVKPNMVHGLEYFGIDLPDSIWEVVFCAILIIQGQNIFKSGRRFLYAWKQRGSDHGV 623
Query: 466 KAQGDGWLLTVALIEGTKLAPVDATGFSDPYVVFTCNGKSKTSSIKFQTLEPQWN 520
KA GDGWLLTVALIEG+ + G DPYVVFTCNGK KTSS+KFQT EP+WN
Sbjct: 624 KAHGDGWLLTVALIEGSGVVGSGTPGLPDPYVVFTCNGKRKTSSVKFQTSEPKWN 678
>Os04g0476600 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 672
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 160/230 (69%), Gaps = 2/230 (0%)
Query: 291 FRTEILFRILPGPELDSEQLTSHLVISWRINFLQSTMMKGMIENGAKQGLQQNYAQFSDL 350
F +L++I+ PEL S + SHL +S+ + FLQSTMMK MIE + GL++N+ ++++
Sbjct: 3 FEVVMLYKIIHYPELSSSEGMSHLTVSYNVEFLQSTMMKSMIEGSVRDGLKENFESYAEI 62
Query: 351 LSQKIKPIDVDAGSDKGQVLASLQRGQESDWNIAFLYFCNFGVLCSLFVTIYIAVHVQLR 410
LS+ +K D AG DK ++LA LQ +SD +A+ YFCNF V+ ++ + +Y+ VH+ L
Sbjct: 63 LSRHVKIAD-SAGMDKERLLAPLQTDHQSDIRLAYKYFCNFTVISTVIMALYVLVHIFLS 121
Query: 411 SSGAHKGLEFPGLDLPDSLSEIVMGGLLFLQLRHIYKKISCFIQAREQKVGDHGVKAQGD 470
G GLEF GLDLPD+ E+++ G+L LQL + IS F++ R Q+ DHG+KA GD
Sbjct: 122 RPGPLMGLEFKGLDLPDTFGELIISGILVLQLERLLSMISRFVEVRVQRGSDHGIKANGD 181
Query: 471 GWLLTVALIEGTKLAPVDATGFSDPYVVFTCNGKSKTSSIKFQTLEPQWN 520
GWLLTVAL+E T L PV ++G DPYVVF+CNG ++TSS++ QT +PQWN
Sbjct: 182 GWLLTVALLEATSLPPV-SSGSVDPYVVFSCNGITRTSSVQLQTHDPQWN 230
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 17,149,929
Number of extensions: 690754
Number of successful extensions: 1738
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1730
Number of HSP's successfully gapped: 5
Length of query: 533
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 427
Effective length of database: 11,501,117
Effective search space: 4910976959
Effective search space used: 4910976959
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)