BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0338500 Os08g0338500|AK107751
         (197 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os08g0338500  Pectinesterase inhibitor domain containing pro...   309   1e-84
Os12g0129100                                                      104   3e-23
Os11g0132100  Pectinesterase inhibitor domain containing pro...    91   4e-19
Os12g0128900                                                       72   4e-13

>Os08g0338500 Pectinesterase inhibitor domain containing protein
          Length = 197

 Score =  309 bits (791), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 164/197 (83%), Positives = 164/197 (83%)

Query: 1   MTTAMASSSSRGVTVPFLMIXXXXXXXXXXXXEVTVTGDGILLPSCKTVGGGSTYFDVQF 60
           MTTAMASSSSRGVTVPFLMI            EVTVTGDGILLPSCKTVGGGSTYFDVQF
Sbjct: 1   MTTAMASSSSRGVTVPFLMILPLLFVVAALPAEVTVTGDGILLPSCKTVGGGSTYFDVQF 60

Query: 61  CLDALGSVGAGAGARSYRDLAAVAVGLLTANATSTSVKIDALLRXXXXXXKVDAATARCL 120
           CLDALGSVGAGAGARSYRDLAAVAVGLLTANATSTSVKIDALLR      KVDAATARCL
Sbjct: 61  CLDALGSVGAGAGARSYRDLAAVAVGLLTANATSTSVKIDALLRGGGGGGKVDAATARCL 120

Query: 121 RSCRALYAGIARRQPGCAAAVRGGRLGXXXXXXXXXXXXXXXCEDGFRGGNATSPVTAED 180
           RSCRALYAGIARRQPGCAAAVRGGRLG               CEDGFRGGNATSPVTAED
Sbjct: 121 RSCRALYAGIARRQPGCAAAVRGGRLGEARSSLEESAAAARRCEDGFRGGNATSPVTAED 180

Query: 181 DAAFKLAKLGVALLGFA 197
           DAAFKLAKLGVALLGFA
Sbjct: 181 DAAFKLAKLGVALLGFA 197



>Os12g0129100 
          Length = 191

 Score =  104 bits (260), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 86/188 (45%), Gaps = 3/188 (1%)

Query: 9   SSRGVTVPFLMIXXXXXXXXXXXXEVTVTGDGILLPSCKTVGGGST-YFDVQFCLDALGS 67
           SS G+   F +             +     D  +  +CK V G S+    V FC+DALGS
Sbjct: 3   SSHGIVNAFFLFAVALVAASQA--QHAANADSFMSGACKIVAGSSSGVISVTFCMDALGS 60

Query: 68  VGAGAGARSYRDLAAVAVGLLTANATSTSVKIDALLRXXXXXXKVDAATARCLRSCRALY 127
                 A  Y DLA +A+ LLT+N TST  KID +L+      K   AT  C +SC+A Y
Sbjct: 61  DSRSLSASYYSDLAIIAIDLLTSNTTSTKAKIDNILKDDGNGLKPGDATTVCFQSCQAAY 120

Query: 128 AGIARRQPGCAAAVRGGRLGXXXXXXXXXXXXXXXCEDGFRGGNATSPVTAEDDAAFKLA 187
           A + + Q G    V+ GR                 CE GF   N  S +T E+  +F+LA
Sbjct: 121 ASVLQGQLGIFYNVQAGRFPEAMSALEKAANMVEECEKGFGKSNVKSLLTTENHDSFELA 180

Query: 188 KLGVALLG 195
           KLG  LL 
Sbjct: 181 KLGALLLN 188



>Os11g0132100 Pectinesterase inhibitor domain containing protein
          Length = 165

 Score = 91.3 bits (225), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 74/139 (53%), Gaps = 7/139 (5%)

Query: 8   SSSRGVTVPFLMIXXXXXXXXXXXXEVTVTGDGILLPSCKTVGGGSTYFDVQFCLDALGS 67
           SS  GV++ FL+             ++    D  L  +CKTV G S    V FC+ AL S
Sbjct: 2   SSINGVSILFLL------AVLLPASQLAAGIDSALYGACKTVAGNSGVVSVTFCIYALSS 55

Query: 68  VGAGAGARSYRDLAAVAVGLLTANATSTSVKIDALLRXXXXXXKVDAATARCLRSCRALY 127
                 A  ++D A V V L+TANATST  KID +L+        DA   RCL+SC+A Y
Sbjct: 56  DNRSHDAAGFKDYAVVTVDLITANATSTKSKIDGILQNGGGGGAGDAKR-RCLQSCQAAY 114

Query: 128 AGIARRQPGCAAAVRGGRL 146
           AG+ R QPG  A V+GGRL
Sbjct: 115 AGVLRAQPGIVADVQGGRL 133



>Os12g0128900 
          Length = 109

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 61/118 (51%), Gaps = 11/118 (9%)

Query: 5   MASSSS--RGVTVPFLMIXXXXXXXXXXXXEVTVTGDGILLPSCKTVGGGSTYFDVQFCL 62
           MASSS+   GV+V FL              ++    +  L  +CKT+ GGS    V FC+
Sbjct: 1   MASSSNVNNGVSVLFLF-----AVLLIAASQLAAGTNSFLYGACKTIAGGSELLSVTFCI 55

Query: 63  DALGSVGAGAGARSYRDLAAVAVGLLTANATSTSVKIDALLRXXXXXXKVDAATARCL 120
           DAL S    +   SY++ A +AV LLTANATST  +ID  LR        DAA  RCL
Sbjct: 56  DALSSDNRSSNISSYKEFAVIAVDLLTANATSTKSEIDGKLRNGSG----DAAATRCL 109



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.134    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,593,482
Number of extensions: 210686
Number of successful extensions: 659
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 657
Number of HSP's successfully gapped: 4
Length of query: 197
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 101
Effective length of database: 12,023,257
Effective search space: 1214348957
Effective search space used: 1214348957
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 153 (63.5 bits)