Os12g0129100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os12g0129100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 121.58 | 0.518 | 12.5 | -0.154 | 2.93 | -1.03 | 0.516 | 0.825 | -0.245 | 4.99 | 67 | 9 | -- | -- |
| 123.15 | 0.517 | 12.5 | -0.119 | 2.93 | -1.04 | 0.966 | -- | -0.23 | 4.98 | 65.49 | 6 | -- | -- |
| 121.82 | 0.514 | 12.5 | -0.148 | 2.93 | -1.04 | -- | 1.02 | -0.246 | 4.97 | 67 | 6 | -- | -- |
| 125.52 | 0.522 | 12.5 | -0.121 | 2.92 | -1.01 | -- | -- | -0.233 | 4.98 | 65.63 | 6 | -- | -- |
| 313.16 | 0.824 | 12.5 | -0.0946 | -- | 2.03 | -- | 1.25 | -0.0707 | -- | 43.71 | 423 | -- | -- |
| 146.59 | 0.568 | 12.5 | -0.129 | 2.34 | -- | 0.809 | -- | -0.146 | 5.8 | -- | -- | -- | -- |
| 148.2 | 0.57 | 12.5 | -0.124 | 2.35 | -- | -- | -- | -0.15 | 5.79 | -- | -- | -- | -- |
| 299.32 | 0.806 | 12.5 | -0.144 | -- | 1.89 | -- | -- | 0.0273 | -- | 66 | 421 | -- | -- |
| 125.9 | 0.523 | 12.5 | -- | 2.92 | -1.01 | -- | -- | -0.219 | 4.99 | 65.56 | 6 | -- | -- |
| 434.29 | 0.974 | 12.5 | -0.0512 | -- | -- | -- | -- | -0.0945 | -- | -- | -- | -- | -- |
| 148.6 | 0.57 | 12.5 | -- | 2.35 | -- | -- | -- | -0.136 | 5.79 | -- | -- | -- | -- |
| 299.67 | 0.806 | 12.5 | -- | -- | 1.89 | -- | -- | 0.043 | -- | 66 | 428 | -- | -- |
| 434.36 | 0.973 | 12.5 | -- | -- | -- | -- | -- | -0.0888 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.52 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 15 | 112.16 | wind | 7 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 19 | 112.47 | wind | 7 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 23 | 113.17 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 6 |
| 27 | 113.75 | wind | 5 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 29 | 113.81 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 10 |
| 30 | 113.97 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 32 | 114.07 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 10 |
| 34 | 114.15 | wind | 5 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 36 | 114.22 | temperature | 30 | 10 | < th | dose dependent | rect. | 12 | 8 |
| 38 | 114.32 | temperature | 30 | 270 | < th | dose independent | rect. | 13 | 5 |
| 40 | 114.34 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 43 | 114.44 | wind | 5 | 14400 | > th | dose independent | rect. | 13 | 5 |
| 57 | 114.70 | humidity | 50 | 90 | > th | dose dependent | rect. | 13 | 6 |
| 89 | 115.26 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 4 |
| 94 | 115.33 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 15 |
| 114 | 115.74 | wind | 5 | 14400 | > th | dose independent | rect. | 11 | 14 |
| 123 | 115.88 | wind | 5 | 14400 | < th | dose independent | rect. | 11 | 14 |
| 141 | 116.16 | wind | 5 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 148 | 116.22 | wind | 5 | 14400 | > th | dose independent | sin | 20 | NA |
| 164 | 116.38 | wind | 5 | 14400 | < th | dose independent | sin | 20 | NA |
| 225 | 117.16 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 233 | 117.41 | humidity | 70 | 10 | > th | dose dependent | rect. | 24 | 20 |
| 274 | 117.98 | humidity | 70 | 10 | > th | dose independent | rect. | 12 | 8 |
| 294 | 118.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 297 | 118.14 | humidity | 70 | 10 | > th | dose independent | rect. | 24 | 20 |
| 302 | 118.21 | humidity | 60 | 270 | > th | dose independent | rect. | 13 | 5 |
| 309 | 118.26 | humidity | 50 | 270 | > th | dose dependent | rect. | 22 | 21 |
| 362 | 118.67 | humidity | 70 | 10 | > th | dose dependent | rect. | 10 | 10 |
| 367 | 118.70 | humidity | 60 | 270 | > th | dose independent | rect. | 15 | 2 |
| 402 | 118.98 | humidity | 60 | 10 | > th | dose dependent | rect. | 13 | 7 |
| 412 | 119.04 | humidity | 70 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 463 | 119.35 | wind | 5 | 14400 | > th | dose dependent | rect. | 13 | 12 |
| 479 | 119.46 | humidity | 70 | 10 | > th | dose dependent | rect. | 22 | 22 |
| 511 | 119.67 | wind | 3 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 536 | 119.83 | humidity | 50 | 270 | > th | dose dependent | rect. | 11 | 7 |
| 562 | 119.96 | humidity | 70 | 10 | > th | dose dependent | sin | 23 | NA |
| 585 | 120.11 | temperature | 30 | 270 | < th | dose independent | rect. | 13 | 18 |
| 632 | 120.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 651 | 120.48 | humidity | 50 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 731 | 120.92 | wind | 3 | 14400 | > th | dose dependent | sin | 19 | NA |
| 745 | 120.99 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 746 | 121.00 | wind | 9 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 794 | 121.25 | humidity | 70 | 10 | > th | dose independent | rect. | 13 | 19 |
| 798 | 121.26 | humidity | 70 | 10 | > th | dose independent | rect. | 10 | 10 |
| 808 | 121.30 | temperature | 30 | 10 | < th | dose dependent | sin | 23 | NA |
| 865 | 121.49 | wind | 9 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 871 | 121.52 | humidity | 80 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 922 | 121.76 | humidity | 80 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 928 | 121.79 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |