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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0338500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Pectinesterase inhibitor domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.99 (0.0263) R2 : 0.0075
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.103 (0.0554) R2dN8 : 0.00968 R2N8 : 0.0075
σ : 0.495
deviance : 112.67
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
100.79 0.472 2.99 0.111 0.201 0.371 -0.137 1.38 0.123 21.9 47.17 1691 -- --
103.5 0.474 2.99 0.259 0.201 0.491 -0.109 -- 0.152 21.3 44.89 1729 -- --
100.82 0.468 2.99 0.116 0.214 0.377 -- 1.43 0.121 21.6 45.03 1761 -- --
103.54 0.474 2.99 0.262 0.211 0.498 -- -- 0.152 21.2 44 1725 -- --
103.18 0.473 2.99 0.127 -- 0.375 -- 1.25 0.126 -- 46.03 1620 -- --
108.79 0.489 2.99 0.239 0.19 -- -0.104 -- 0.129 22.7 -- -- -- --
108.84 0.489 2.99 0.243 0.19 -- -- -- 0.129 22.8 -- -- -- --
105.61 0.479 2.98 0.265 -- 0.459 -- -- 0.148 -- 44 1571 -- --
105.33 0.478 2.99 -- 0.202 0.477 -- -- 0.133 21.3 45.92 1729 -- --
111.07 0.492 2.99 0.246 -- -- -- -- 0.13 -- -- -- -- --
110.39 0.491 3 -- 0.192 -- -- -- 0.102 22.8 -- -- -- --
107.48 0.483 2.99 -- -- 0.45 -- -- 0.117 -- 46.84 1580 -- --
112.67 0.495 2.99 -- -- -- -- -- 0.103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 97.72 precipitation 0.1 270 > th dose independent rect. 8 1
2 97.72 precipitation 0.1 270 > th dose dependent rect. 8 1
3 98.72 wind 1.0 14400 > th dose independent rect. 17 3
4 98.86 wind 1.0 14400 < th dose independent rect. 17 2
6 98.95 wind 9.0 14400 < th dose independent rect. 3 8
7 98.99 wind 1.0 14400 > th dose independent rect. 17 1
10 99.09 wind 1.0 14400 < th dose dependent rect. 18 2
11 99.18 wind 9.0 14400 < th dose independent rect. 1 10
18 99.42 wind 9.0 14400 > th dose independent rect. 1 10
19 99.44 wind 9.0 14400 > th dose independent rect. 3 8
25 99.53 wind 9.0 14400 > th dose dependent rect. 1 10
28 99.55 wind 9.0 14400 > th dose dependent rect. 3 8
31 99.58 humidity 90.0 14400 < th dose independent rect. 11 1
42 99.82 wind 5.0 14400 < th dose independent rect. 3 3
44 99.86 humidity 90.0 14400 > th dose independent rect. 10 8
46 99.91 humidity 90.0 14400 > th dose dependent rect. 17 1
47 99.92 wind 5.0 14400 > th dose independent rect. 4 2
58 100.06 radiation 1.0 4320 > th dose independent rect. 6 2
63 100.08 radiation 1.0 4320 < th dose independent rect. 6 2
71 100.13 wind 3.0 14400 > th dose dependent rect. 3 1
73 100.14 humidity 90.0 14400 > th dose dependent rect. 10 9
75 100.15 wind 3.0 14400 > th dose dependent rect. 2 3
76 100.16 wind 1.0 4320 < th dose independent rect. 14 5
90 100.29 precipitation 0.1 4320 < th dose independent rect. 5 7
91 100.29 wind 5.0 14400 > th dose dependent rect. 5 1
92 100.29 precipitation 0.1 4320 < th dose dependent rect. 5 7
93 100.30 precipitation 0.1 14400 < th dose independent rect. 5 4
94 100.30 precipitation 0.1 14400 < th dose dependent rect. 5 4
95 100.31 precipitation 0.1 14400 > th dose independent rect. 5 2
98 100.32 precipitation 0.1 14400 < th dose independent rect. 5 2
101 100.32 precipitation 0.1 14400 < th dose dependent rect. 5 2
102 100.33 humidity 90.0 14400 < th dose independent rect. 9 6
104 100.35 precipitation 0.1 14400 > th dose dependent rect. 5 4
105 100.36 precipitation 0.1 14400 > th dose dependent rect. 5 2
106 100.36 humidity 90.0 14400 > th dose dependent rect. 14 5
110 100.37 precipitation 0.1 4320 > th dose dependent rect. 5 7
120 100.43 humidity 90.0 14400 > th dose independent rect. 14 5
123 100.44 precipitation 0.1 14400 > th dose independent rect. 5 4
131 100.45 humidity 90.0 14400 < th dose independent rect. 9 8
140 100.48 precipitation 0.1 4320 > th dose independent rect. 5 7
187 100.67 humidity 90.0 4320 > th dose independent rect. 11 3
227 100.77 radiation 1.0 4320 < th dose dependent rect. 6 2
229 100.78 humidity 90.0 14400 < th dose independent sin 0 NA
234 100.79 humidity 90.0 14400 > th dose independent sin 23 NA
254 100.83 wind 3.0 10 < th dose dependent rect. 11 1
266 100.85 temperature 25.0 14400 < th dose independent rect. 14 1
280 100.87 wind 1.0 1440 > th dose independent rect. 7 5
287 100.88 humidity 90.0 14400 < th dose independent rect. 16 1
298 100.90 humidity 90.0 14400 < th dose independent rect. 6 7
310 100.91 wind 1.0 1440 < th dose dependent rect. 7 5
341 100.98 humidity 50.0 1440 > th dose dependent rect. 17 21
370 101.06 temperature 25.0 14400 > th dose independent rect. 14 1
371 101.06 atmosphere 1005.0 43200 > th dose independent rect. 11 1
372 101.06 wind 9.0 14400 < th dose independent rect. 6 4
374 101.06 radiation 1.0 4320 < th dose independent rect. 6 10
390 101.08 radiation 1.0 4320 > th dose independent rect. 6 10
394 101.08 temperature 25.0 14400 < th dose dependent rect. 8 1
419 101.12 humidity 50.0 1440 > th dose dependent rect. 15 19
425 101.14 wind 9.0 14400 > th dose independent rect. 7 3
432 101.14 humidity 90.0 14400 > th dose dependent sin 21 NA
434 101.15 atmosphere 1005.0 43200 < th dose independent rect. 11 1
444 101.16 humidity 90.0 14400 < th dose independent rect. 7 17
459 101.18 humidity 90.0 14400 > th dose dependent rect. 10 14
476 101.20 humidity 50.0 1440 > th dose dependent rect. 12 22
483 101.21 humidity 90.0 14400 < th dose independent rect. 3 20
492 101.23 humidity 90.0 14400 > th dose independent rect. 9 3
527 101.26 humidity 90.0 14400 < th dose dependent rect. 6 4
543 101.28 humidity 90.0 14400 > th dose independent rect. 10 14
544 101.28 humidity 70.0 14400 < th dose independent rect. 18 16
557 101.30 wind 1.0 1440 < th dose independent rect. 7 4
559 101.30 wind 3.0 4320 < th dose independent rect. 8 11
562 101.30 wind 9.0 14400 > th dose dependent rect. 5 5
573 101.31 humidity 90.0 14400 > th dose independent rect. 6 18
595 101.33 humidity 90.0 1440 > th dose dependent rect. 7 1
608 101.34 humidity 80.0 14400 > th dose dependent rect. 6 7
626 101.35 humidity 50.0 14400 > th dose dependent rect. 6 4
648 101.37 temperature 25.0 14400 < th dose independent rect. 9 7
658 101.38 temperature 25.0 14400 > th dose independent rect. 9 7
663 101.38 humidity 50.0 14400 > th dose dependent rect. 4 8
670 101.39 wind 3.0 4320 < th dose independent rect. 8 9
687 101.40 wind 3.0 4320 > th dose independent rect. 8 9
689 101.40 wind 3.0 4320 > th dose independent rect. 8 12
701 101.40 humidity 90.0 1440 > th dose dependent rect. 7 20
728 101.42 humidity 50.0 1440 > th dose dependent no NA NA
738 101.42 humidity 50.0 1440 > th dose dependent rect. 20 23
788 101.46 humidity 70.0 14400 > th dose independent rect. 18 16
803 101.47 humidity 90.0 14400 < th dose dependent rect. 5 7
810 101.47 humidity 50.0 1440 > th dose dependent rect. 2 23
811 101.47 humidity 50.0 1440 > th dose dependent rect. 5 23
825 101.48 humidity 50.0 1440 > th dose dependent rect. 24 23
881 101.52 humidity 80.0 14400 > th dose dependent rect. 11 1
908 101.54 wind 1.0 1440 > th dose independent rect. 7 2
934 101.55 wind 9.0 14400 > th dose dependent rect. 1 3
973 101.57 temperature 25.0 14400 < th dose independent rect. 9 1
975 101.57 humidity 80.0 14400 > th dose independent rect. 11 1
976 101.57 humidity 90.0 14400 < th dose independent rect. 7 1
987 101.57 humidity 50.0 1440 > th dose dependent sin 13 NA