BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0229600 Os08g0229600|AK064286
(138 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0229600 Exo70 exocyst complex subunit family protein 288 8e-79
Os09g0347300 Exo70 exocyst complex subunit family protein 177 3e-45
Os08g0232700 Exo70 exocyst complex subunit family protein 114 2e-26
Os01g0768000 86 6e-18
Os05g0369300 Exo70 exocyst complex subunit family protein 83 6e-17
Os05g0369100 79 8e-16
Os05g0369500 Exo70 exocyst complex subunit family protein 76 8e-15
Os05g0369700 Exo70 exocyst complex subunit family protein 73 7e-14
Os01g0921900 70 4e-13
Os01g0383100 Exo70 exocyst complex subunit family protein 67 4e-12
Os02g0575900 Exo70 exocyst complex subunit family protein 65 2e-11
>Os08g0229600 Exo70 exocyst complex subunit family protein
Length = 138
Score = 288 bits (737), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 138/138 (100%), Positives = 138/138 (100%)
Query: 1 RRVESMDLPSSALIETSMTQRYIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFGFRR 60
RRVESMDLPSSALIETSMTQRYIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFGFRR
Sbjct: 1 RRVESMDLPSSALIETSMTQRYIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFGFRR 60
Query: 61 YLSLDRFESEFQRTYTNHKFWKVPNPDLRQRLRQAIVQKVVTHYSMYLEERAARGMHNQP 120
YLSLDRFESEFQRTYTNHKFWKVPNPDLRQRLRQAIVQKVVTHYSMYLEERAARGMHNQP
Sbjct: 61 YLSLDRFESEFQRTYTNHKFWKVPNPDLRQRLRQAIVQKVVTHYSMYLEERAARGMHNQP 120
Query: 121 PKSTPEQLKELLDELFEG 138
PKSTPEQLKELLDELFEG
Sbjct: 121 PKSTPEQLKELLDELFEG 138
>Os09g0347300 Exo70 exocyst complex subunit family protein
Length = 598
Score = 177 bits (448), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 99/124 (79%)
Query: 2 RVESMDLPSSALIETSMTQRYIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFGFRRY 61
R+ES+DLPS ALI+ T+RYIDTY+ V WSPLL C+FI N S + K FGFRRY
Sbjct: 462 RIESLDLPSWALIDRCRTRRYIDTYIDVFWSPLLCCIFIGNSSDTPRKKTYRPAFGFRRY 521
Query: 62 LSLDRFESEFQRTYTNHKFWKVPNPDLRQRLRQAIVQKVVTHYSMYLEERAARGMHNQPP 121
LSL+ FE EF++TY HKF+KVP+P LRQRLRQAI+QK++ HYSMYLEERAARGMHN+PP
Sbjct: 522 LSLENFEIEFRKTYAKHKFFKVPDPKLRQRLRQAIIQKIIPHYSMYLEERAARGMHNRPP 581
Query: 122 KSTP 125
K TP
Sbjct: 582 KITP 585
>Os08g0232700 Exo70 exocyst complex subunit family protein
Length = 526
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 89/148 (60%), Gaps = 22/148 (14%)
Query: 1 RRVESM-DLPSSALIE--------TSMTQRYIDTYLHVSWSPLLSCLFIENPSISLGKTR 51
+RVES+ DLP++ E S +RYID YL+ SWSPLL CL I+ P ++LG++
Sbjct: 391 QRVESLRDLPAAVRQERILLLHASDSKIKRYIDDYLNASWSPLLRCLLIDKPFVALGRSH 450
Query: 52 AGKPFGFRRYLSLDRFESEFQRTYTNHKFWKVPNPDLRQRLRQAIVQKVVTHYSMYLEER 111
K E++ Q TY KFWKVPNP LRQRLR+AI+ KV+ YS Y+E+
Sbjct: 451 ESK------------IETQLQTTYATQKFWKVPNPQLRQRLRRAIMSKVIPDYSKYIEQM 498
Query: 112 AARGMHNQPPKST-PEQLKELLDELFEG 138
+ N+ T PEQL++ ++ELFEG
Sbjct: 499 DRQNKINRHLVVTSPEQLEQQIEELFEG 526
>Os01g0768000
Length = 243
Score = 86.3 bits (212), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 66/123 (53%), Gaps = 21/123 (17%)
Query: 22 YIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFGFRRYLSLDRFESEFQRTYTNHKFW 81
YID Y SW+P+LSCL +++G + L +FE F TYT K W
Sbjct: 136 YIDGYFSASWAPVLSCL----------SSKSGLSPWSNKSSPLRKFELAFHETYTAQKLW 185
Query: 82 KVPNPDLRQRLRQAIVQKVVTHYSMYLEER------AARGMHNQPPKSTPEQLKELLDEL 135
KVP+P+LR RLR+ I ++VV+ Y YL E +RG N TP L+E+L EL
Sbjct: 186 KVPSPELRGRLRKTITERVVSGYREYLLEHPELKRLVSRGNSN-----TPADLEEMLAEL 240
Query: 136 FEG 138
FEG
Sbjct: 241 FEG 243
>Os05g0369300 Exo70 exocyst complex subunit family protein
Length = 520
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 17/119 (14%)
Query: 21 RYIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFGFRRYLS-LDRFESEFQRTYTNHK 79
+Y + Y+ SW P+L CL P F ++ S L RF+SEFQ+T+ + K
Sbjct: 418 QYQEKYMLASWEPVLYCL------------HEKMPLWFPKHSSQLARFKSEFQKTFRHQK 465
Query: 80 FWKVPNPDLRQRLRQAIVQKVVTHYSMYLEERAARGMHNQPPKSTPEQLKELLDELFEG 138
WKVPNP LRQ+LR+AI+ KV+T Y YLE+ + S + ++++++ELFEG
Sbjct: 466 LWKVPNPRLRQKLREAIIDKVITGYKRYLEDHPEL----EKCSSDLQDMEDMVNELFEG 520
>Os05g0369100
Length = 164
Score = 79.3 bits (194), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 69/120 (57%), Gaps = 18/120 (15%)
Query: 21 RYIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFGFRRYLS-LDRFESEFQRTYTNH- 78
+Y + Y+ SW P+L CL + P F ++ S L RF+SEFQ+T T H
Sbjct: 61 QYQEKYMLASWEPVLYCL------------QDKMPLWFPKHSSQLSRFKSEFQKTCTPHQ 108
Query: 79 KFWKVPNPDLRQRLRQAIVQKVVTHYSMYLEERAARGMHNQPPKSTPEQLKELLDELFEG 138
K WKVPNP LRQ+LR+AI KV+T Y YLE+ + S + ++++++ELFEG
Sbjct: 109 KLWKVPNPRLRQKLREAITDKVITGYKRYLEDHPEL----EKCSSDLQDMEDMVNELFEG 164
>Os05g0369500 Exo70 exocyst complex subunit family protein
Length = 528
Score = 75.9 bits (185), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 16/119 (13%)
Query: 22 YIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFGFRRYLSLDRFESEFQRTYTNHKFW 81
Y + YL VSW P+LS L++ N + K F L RF+SEFQ+ + K W
Sbjct: 424 YQNCYLDVSWEPVLSFLYLYN--------KMPKFFPKHSPQLLARFQSEFQKACRHQKLW 475
Query: 82 KVPNPDLRQRLRQAIVQKVVTHYSMYLEERAARGMHNQPPKSTPEQL--KELLDELFEG 138
KVPN + R LR+AI KV+T Y YLE H +P KS+ + L +++++ELFEG
Sbjct: 476 KVPNTEHRNSLRKAISDKVITAYRKYLEG------HLEPEKSSSDLLAMEDMVNELFEG 528
>Os05g0369700 Exo70 exocyst complex subunit family protein
Length = 229
Score = 72.8 bits (177), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 13/119 (10%)
Query: 20 QRYIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFGFRRYLSLDRFESEFQRTYTNHK 79
++Y Y+ SW P+LSCL + P + + L RFE EF++T ++ K
Sbjct: 124 EQYQKEYMRASWEPVLSCLHDKMPPCFPKLSSHSE---------LSRFELEFEKTCSHQK 174
Query: 80 FWKVPNPDLRQRLRQAIVQKVVTHYSMYLEERAARGMHNQPPKSTPEQLKELLDELFEG 138
WKVP P+LRQ LR+ I+ K++T Y Y+E+ + + P ++ ++++LFEG
Sbjct: 175 LWKVPLPNLRQSLRETIINKIITRYKKYMEDHPEQ----EKCGRDPLDMEGMVNDLFEG 229
>Os01g0921900
Length = 571
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 65/121 (53%), Gaps = 15/121 (12%)
Query: 20 QRYIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFG-FRRYLSLDRFESEFQRTYTNH 78
++Y+ TY+ +SW P +SCL R G G F + S RF +F TY N
Sbjct: 461 EQYLKTYVDLSWGPAISCL----------SARTGMLGGCFSQPSSTVRFSLQFDSTYYNQ 510
Query: 79 KFWKVPNPDLRQRLRQAIVQKVVTHYSMYLEE-RAARGMHNQPPKSTPEQLKELLDELFE 137
+ WKV +P LR+++R+A+ KV+ Y +L++ A+ H TPE LK L +LFE
Sbjct: 511 ECWKVEDPQLREKVRRAVCDKVILAYQAHLDKYMKAKRKHEW---YTPELLKAQLMKLFE 567
Query: 138 G 138
G
Sbjct: 568 G 568
>Os01g0383100 Exo70 exocyst complex subunit family protein
Length = 378
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 13/118 (11%)
Query: 21 RYIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFGFRRYLSLDRFESEFQRTYTNHKF 80
+++ +Y+ SW+P++S I TR K ++ D+F S F+ TY K
Sbjct: 274 QFLASYVEASWTPVMSSFII---------TRIPKILWPQQLF--DKFNSRFEMTYNVQKT 322
Query: 81 WKVPNPDLRQRLRQAIVQKVVTHYSMYLEERAARGMHNQPPKSTPEQLKELLDELFEG 138
WKV +P +RQ+LR+ I QKV+ Y MYLE + + + + E L+ L E+FEG
Sbjct: 323 WKVTDPVIRQKLREKITQKVIPLYRMYLESYSDK--KQKSARFNVEHLEARLLEIFEG 378
>Os02g0575900 Exo70 exocyst complex subunit family protein
Length = 700
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 20/136 (14%)
Query: 11 SALI--ETSMTQR------YIDTYLHVSWSPLLSCLFIENPSISLGKTRAGKPFGFRRYL 62
S LI E+ + QR I Y+ SW P++S + R +
Sbjct: 577 SGLILGESCLVQREDQLDQLITAYIEASWDPVISSF----------EKRTQVAIILWPHQ 626
Query: 63 SLDRFESEFQRTYTNHKFWKVPNPDLRQRLRQAIVQKVVTHYSMYLEERAARGMHNQPPK 122
D+F S F+R Y+ K WKV NP++R +LR+AI+QK++ Y M + ++ + +
Sbjct: 627 LFDKFNSSFERIYSVQKTWKVTNPNVRLKLREAIIQKLIPVYQMQMGNQSEK--KQMSAR 684
Query: 123 STPEQLKELLDELFEG 138
+ EQL+ L E+FEG
Sbjct: 685 YSVEQLESQLLEMFEG 700
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,845,727
Number of extensions: 185692
Number of successful extensions: 444
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 445
Number of HSP's successfully gapped: 11
Length of query: 138
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 48
Effective length of database: 12,336,541
Effective search space: 592153968
Effective search space used: 592153968
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 150 (62.4 bits)