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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0383100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Exo70 exocyst complex subunit family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.06 (0.04) R2 : 0.000732
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0487 (0.0843) R2dN8 : 0.000946 R2N8 : 0.000732
σ : 0.754
deviance : 261.02
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
243.57 0.733 3.15 -1.1 0.0141 0.726 -0.593 3.76 -0.187 4.39 1.083 10021 -- --
251.71 0.739 3.05 -0.437 0.235 0.567 0.707 -- -0.0238 16.2 10.55 3537 -- --
244.36 0.728 3.15 -1.07 0.00684 0.772 -- 3.86 -0.187 4.43 0.83 9980 -- --
252.93 0.741 3.05 -0.439 0.257 0.615 -- -- -0.0155 16.2 10.18 3539 -- --
244.33 0.728 3.16 -1.11 -- 0.844 -- 4.13 -0.195 -- 0.75 9980 -- --
255.39 0.749 3.07 -0.406 0.0451 -- 0.651 -- -0.0951 15.1 -- -- -- --
256.51 0.75 3.06 -0.392 0.0807 -- -- -- -0.0918 11.1 -- -- -- --
252.8 0.741 3.04 -0.396 -- 0.429 -- -- -0.011 -- 15.18 2764 -- --
257.24 0.747 3.04 -- 0.196 0.545 -- -- 0.0334 15.8 15.03 3525 -- --
256.92 0.749 3.07 -0.394 -- -- -- -- -0.0925 -- -- -- -- --
260.57 0.755 3.05 -- 0.0846 -- -- -- -0.0481 11.4 -- -- -- --
256.79 0.746 3.04 -- -- 0.44 -- -- 0.0294 -- 16.35 2729 -- --
261.02 0.754 3.06 -- -- -- -- -- -0.0487 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 232.08 radiation 1 1440 < th dose independent rect. 18 12
2 232.18 radiation 1 1440 > th dose independent rect. 18 12
3 233.43 radiation 1 1440 < th dose dependent rect. 2 3
5 233.76 radiation 1 1440 < th dose dependent rect. 4 1
6 233.89 radiation 1 1440 < th dose dependent rect. 20 9
8 234.00 radiation 1 1440 < th dose dependent rect. 22 7
15 237.14 radiation 1 1440 < th dose dependent rect. 18 12
26 238.43 radiation 1 90 < th dose independent rect. 8 8
28 238.49 radiation 1 10 < th dose independent rect. 15 1
36 238.57 radiation 1 10 < th dose independent rect. 11 5
64 238.73 humidity 90 90 > th dose independent rect. 14 1
67 238.73 humidity 90 90 > th dose dependent rect. 14 1
74 239.09 radiation 1 1440 > th dose independent rect. 18 1
84 239.10 radiation 1 1440 < th dose independent rect. 18 5
93 239.21 radiation 1 1440 < th dose independent rect. 18 1
98 239.27 radiation 1 1440 < th dose independent rect. 18 9
99 239.28 radiation 1 10 < th dose dependent rect. 11 5
110 239.67 radiation 1 10 < th dose dependent rect. 13 3
112 239.75 radiation 10 90 < th dose dependent rect. 14 1
115 239.82 radiation 1 10 < th dose dependent rect. 15 1
121 240.80 temperature 20 270 < th dose independent rect. 9 1
125 241.19 radiation 1 1440 < th dose independent rect. 2 4
127 241.26 radiation 1 1440 < th dose independent rect. 4 2
131 241.33 radiation 1 1440 < th dose independent rect. 22 8
136 241.52 wind 1 43200 > th dose dependent rect. 23 1
137 241.64 radiation 1 1440 > th dose independent rect. 4 2
147 241.64 wind 9 43200 < th dose dependent rect. 23 1
180 243.00 temperature 25 90 < th dose dependent rect. 14 1
181 243.06 radiation 1 1440 < th dose dependent rect. 18 5
183 243.16 radiation 1 1440 < th dose dependent rect. 18 1
208 243.76 radiation 1 4320 < th dose dependent rect. 17 22
216 243.92 radiation 1 4320 < th dose dependent sin 11 NA
220 243.96 atmosphere 1000 90 > th dose dependent rect. 20 10
225 243.98 radiation 1 14400 < th dose dependent rect. 6 23
229 244.04 radiation 1 14400 < th dose dependent rect. 6 13
231 244.04 radiation 1 14400 < th dose dependent rect. 6 16
268 244.27 radiation 30 43200 < th dose independent rect. 17 4
273 244.28 radiation 1 4320 < th dose dependent rect. 14 22
274 244.29 radiation 1 14400 < th dose dependent sin 23 NA
286 244.32 radiation 1 4320 < th dose dependent rect. 10 23
288 244.33 radiation 1 4320 < th dose dependent rect. 14 19
307 244.37 radiation 1 4320 < th dose dependent rect. 1 22
310 244.37 radiation 1 4320 < th dose dependent rect. 21 22
312 244.37 radiation 1 4320 < th dose dependent rect. 4 23
315 244.38 radiation 1 4320 < th dose dependent no NA NA
316 244.38 radiation 1 4320 < th dose dependent rect. 4 19
337 244.40 radiation 1 4320 < th dose dependent rect. 2 17
354 244.41 radiation 1 4320 < th dose dependent rect. 4 15
368 244.42 radiation 1 4320 < th dose independent rect. 17 18
377 244.44 temperature 25 90 < th dose dependent rect. 10 6
382 244.45 radiation 30 270 < th dose dependent rect. 9 6
388 244.48 radiation 1 14400 < th dose dependent rect. 4 13
401 244.51 radiation 1 4320 < th dose independent rect. 17 22
414 244.53 atmosphere 1005 30 > th dose dependent rect. 5 1
479 244.69 radiation 40 43200 < th dose independent rect. 15 1
480 244.69 humidity 90 4320 < th dose independent rect. 23 7
550 244.75 radiation 40 43200 < th dose independent rect. 15 6
556 244.76 radiation 1 4320 < th dose independent sin 11 NA
562 244.77 radiation 40 43200 < th dose independent rect. 15 10
563 244.77 radiation 40 43200 < th dose independent rect. 15 12
577 244.78 radiation 30 270 < th dose dependent rect. 8 8
605 244.82 radiation 20 43200 < th dose independent rect. 17 8
606 244.82 radiation 20 43200 < th dose independent rect. 17 10
630 244.84 temperature 30 270 < th dose dependent rect. 21 19
659 244.90 radiation 1 4320 > th dose independent rect. 17 22
660 244.90 wind 1 14400 < th dose dependent rect. 17 1
671 244.92 radiation 1 14400 < th dose independent rect. 7 12
674 244.92 radiation 1 14400 < th dose independent rect. 7 16
676 244.92 radiation 1 14400 < th dose independent rect. 7 20
708 244.96 radiation 20 270 < th dose independent rect. 9 6
727 245.01 wind 1 10 < th dose independent rect. 17 5
744 245.02 wind 1 10 < th dose independent rect. 21 1
755 245.02 wind 1 10 < th dose dependent rect. 21 1
779 245.05 temperature 25 10 > th dose dependent rect. 14 22
781 245.06 radiation 1 14400 > th dose independent rect. 7 12
846 245.11 radiation 40 270 < th dose dependent rect. 19 20
874 245.14 radiation 1 4320 < th dose dependent rect. 21 13
882 245.15 radiation 1 14400 < th dose independent sin 22 NA
944 245.19 radiation 1 4320 < th dose dependent rect. 1 9
958 245.20 temperature 15 270 > th dose dependent rect. 4 15
978 245.22 radiation 1 4320 < th dose dependent rect. 4 6