BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0588000 Os07g0588000|AK099482
(438 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0588000 Interferon-related developmental regulator dom... 807 0.0
Os03g0448700 Interferon-related developmental regulator dom... 607 e-174
Os02g0219100 217 2e-56
Os08g0491400 Interferon-related developmental regulator dom... 188 8e-48
Os02g0219050 Interferon-related developmental regulator dom... 184 8e-47
Os02g0219000 Interferon-related developmental regulator dom... 178 7e-45
>Os07g0588000 Interferon-related developmental regulator domain containing
protein
Length = 438
Score = 807 bits (2084), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/423 (95%), Positives = 402/423 (95%)
Query: 16 DDLIXXXXXXXXXXXXXXXXXXXXXYATEHVGSQEFVLDKYIDALYEKRGSTREAALSQL 75
DDLI YATEHVGSQEFVLDKYIDALYEKRGSTREAALSQL
Sbjct: 16 DDLIDSSDADSVGSSSTALSDLSMSYATEHVGSQEFVLDKYIDALYEKRGSTREAALSQL 75
Query: 76 VDAFESFILHGLVENKYATLLSLFNSSIKKGSTKEACLASRAIGLLALTVGAGSSSHEIM 135
VDAFESFILHGLVENKYATLLSLFNSSIKKGSTKEACLASRAIGLLALTVGAGSSSHEIM
Sbjct: 76 VDAFESFILHGLVENKYATLLSLFNSSIKKGSTKEACLASRAIGLLALTVGAGSSSHEIM 135
Query: 136 EESHAQLSRVLQTWPDASKMISALDCLAVVTFVGAADLAETELSLKAMWDVIHPKSGSNV 195
EESHAQLSRVLQTWPDASKMISALDCLAVVTFVGAADLAETELSLKAMWDVIHPKSGSNV
Sbjct: 136 EESHAQLSRVLQTWPDASKMISALDCLAVVTFVGAADLAETELSLKAMWDVIHPKSGSNV 195
Query: 196 GIIRKPRPPVLAAAISAWAFLLTTIGSWRINADSWKEPIAFLSTLLGAEDRAVRMAAGEA 255
GIIRKPRPPVLAAAISAWAFLLTTIGSWRINADSWKEPIAFLSTLLGAEDRAVRMAAGEA
Sbjct: 196 GIIRKPRPPVLAAAISAWAFLLTTIGSWRINADSWKEPIAFLSTLLGAEDRAVRMAAGEA 255
Query: 256 LALCFELNLLDVSFGEDDDVENGGTVGSKSKLFLDMQALKAKISSLASNLSMEAGGKGAD 315
LALCFELNLLDVSFGEDDDVENGGTVGSKSKLFLDMQALKAKISSLASNLSMEAGGKGAD
Sbjct: 256 LALCFELNLLDVSFGEDDDVENGGTVGSKSKLFLDMQALKAKISSLASNLSMEAGGKGAD 315
Query: 316 KKNLTDQRDLFQRILDFVKYGECPEESVKISGKRDVLRVSSWSELIQLNFLRRFLGRGFL 375
KKNLTDQRDLFQRILDFVKYGECPEESVKISGKRDVLRVSSWSELIQLNFLRRFLGRGFL
Sbjct: 316 KKNLTDQRDLFQRILDFVKYGECPEESVKISGKRDVLRVSSWSELIQLNFLRRFLGRGFL 375
Query: 376 KHVQENGLLQDVFDIKTDKAETLSSTDKKIFRSGEEKGRALKLNKDRRLAQERKNAVMLD 435
KHVQENGLLQDVFDIKTDKAETLSSTDKKIFRSGEEKGRALKLNKDRRLAQERKNAVMLD
Sbjct: 376 KHVQENGLLQDVFDIKTDKAETLSSTDKKIFRSGEEKGRALKLNKDRRLAQERKNAVMLD 435
Query: 436 LDE 438
LDE
Sbjct: 436 LDE 438
>Os03g0448700 Interferon-related developmental regulator domain containing
protein
Length = 440
Score = 607 bits (1565), Expect = e-174, Method: Compositional matrix adjust.
Identities = 297/392 (75%), Positives = 335/392 (85%)
Query: 42 ATEHVGSQEFVLDKYIDALYEKRGSTREAALSQLVDAFESFILHGLVENKYATLLSLFNS 101
ATE V SQ+FVLDKYID LYEKRGSTREAAL LVDAFESF+L LVENKYATLLS F +
Sbjct: 46 ATEQVSSQDFVLDKYIDDLYEKRGSTREAALGALVDAFESFVLLDLVENKYATLLSQFIN 105
Query: 102 SIKKGSTKEACLASRAIGLLALTVGAGSSSHEIMEESHAQLSRVLQTWPDASKMISALDC 161
SIKKGS KE CLA GLLA+T+GAGSSSHEIM+ES QL RVLQTWPDASKMISALDC
Sbjct: 106 SIKKGSIKEVCLACHTTGLLAITLGAGSSSHEIMDESRLQLLRVLQTWPDASKMISALDC 165
Query: 162 LAVVTFVGAADLAETELSLKAMWDVIHPKSGSNVGIIRKPRPPVLAAAISAWAFLLTTIG 221
LAVVTFVGA DL+ET+LS+KA+WDVIHPKSGSNVGI+RKP+PP+LAAA+SAWA LLTTI
Sbjct: 166 LAVVTFVGATDLSETQLSMKAIWDVIHPKSGSNVGIVRKPKPPLLAAAVSAWALLLTTIV 225
Query: 222 SWRINADSWKEPIAFLSTLLGAEDRAVRMAAGEALALCFELNLLDVSFGEDDDVENGGTV 281
S + N DSWKE I FLS LL AEDRAVRMAAGEALALCFEL LLDV E+ +V+
Sbjct: 226 SSKRNVDSWKESITFLSALLEAEDRAVRMAAGEALALCFELKLLDVFSNEEVEVDTAEAS 285
Query: 282 GSKSKLFLDMQALKAKISSLASNLSMEAGGKGADKKNLTDQRDLFQRILDFVKYGECPEE 341
GSK++LFL+MQALKAKIS L NLSMEAGG+GADKKNL DQRDLFQRI DF+K GEC EE
Sbjct: 286 GSKNQLFLNMQALKAKISGLVYNLSMEAGGRGADKKNLNDQRDLFQRISDFIKTGECLEE 345
Query: 342 SVKISGKRDVLRVSSWSELIQLNFLRRFLGRGFLKHVQENGLLQDVFDIKTDKAETLSST 401
S++I+GK +LRV+SW E IQLN+LRRFLGRGFLKH Q+NGLL D+FDIK DK E +S+T
Sbjct: 346 SLRIAGKHGILRVTSWRESIQLNYLRRFLGRGFLKHAQDNGLLHDIFDIKMDKTENMSTT 405
Query: 402 DKKIFRSGEEKGRALKLNKDRRLAQERKNAVM 433
+KKI+RSGEEKGRALKLNK+RRLAQ RK ++
Sbjct: 406 EKKIYRSGEEKGRALKLNKERRLAQMRKQNIL 437
>Os02g0219100
Length = 483
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 164/404 (40%), Positives = 232/404 (57%), Gaps = 40/404 (9%)
Query: 52 VLDKYIDALYEKRGSTREAALSQLVDAFESFILHGLVENKYATLLSLFNSSIKKGSTKEA 111
V+++ I AL+EKRGSTREAA+ LV A E + V KY T++S S+KKGS +EA
Sbjct: 48 VVERCIVALFEKRGSTREAAMEDLVGALEGHVSAREVSCKYTTIVSRCVFSLKKGSVREA 107
Query: 112 CLASRAIGLLALTV----GAGSSSHEIMEESHAQLSRVLQTWPDASKMISALDCLAVVTF 167
LA RAIG+LALT+ + + +++ E+ L++ ++ D +K+++A+D LAV TF
Sbjct: 108 RLAYRAIGILALTLGGGGDDTAGAKDVLAEAFPFLAKTVEASHDMAKVLAAIDGLAVATF 167
Query: 168 VGAADLAETELSLKAMW-DVIHPKS----GSNV--GIIRKPRPPVLAAAISAWAFLLTTI 220
G E E S+ A+W VI P S GS + G RK P LAAA+SAWAFLLT +
Sbjct: 168 AGEDGDDEIERSMDAIWGGVIDPSSAGPGGSRLAAGDARKTTPEALAAAVSAWAFLLTVV 227
Query: 221 GSWRINA---DSWKEPIAFLSTLL-GAEDRAVRMAAGEALALCFELNLLDVSFGEDDDVE 276
R A +S K+ IA L+ LL +DR VR+AAGEA+A C EL L + E
Sbjct: 228 HD-RYEAEEGESCKDKIALLAKLLDDHDDRGVRVAAGEAIAACVELKLAHDTPPE----- 281
Query: 277 NGGTVGSKSKLFLDMQALKAKISSLASNLSMEAGGKGA-DKKNLTDQRDLFQRILDFVKY 335
DM+AL A +S LA+ E GKGA DK+ Q+D+F++I F+
Sbjct: 282 -------------DMEALNATVSYLAT----EPSGKGAGDKRRHAGQKDIFRQIEIFLDD 324
Query: 336 GECPEESVKISGKRD-VLRVSSWSELIQLNFLRRFLGRGFLKHVQENGLLQDVFDIKTDK 394
GE P +SV+ S R VL+V++W++L+QLNFL R+LG GF H+Q N L + F++ D+
Sbjct: 325 GEAPTKSVRTSSSRQSVLKVTTWTKLLQLNFLTRYLGNGFHSHLQHNPLFGETFEVDGDE 384
Query: 395 AETLSSTDKKIFRSGEEKGRALKLNKDRRLAQERKNAVMLDLDE 438
E L + K + R EK R L+ + R + KN L +E
Sbjct: 385 VEGLPAARKMMSRKQREKKRTLERRRCREAVWKEKNKFGLPEEE 428
>Os08g0491400 Interferon-related developmental regulator domain containing
protein
Length = 436
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 226/415 (54%), Gaps = 66/415 (15%)
Query: 52 VLDKYIDALYEKRGSTREAALSQLVDAFESFI-LHGLVENKYATLLSLFNSSIKKGST-K 109
VL+K +++E R STREAAL+ LV A E F+ H + + ++ +SIKKG+ K
Sbjct: 47 VLEKVAVSVHESRASTREAALASLVGALEGFVPAHFIGWHLRGEIVRGCCASIKKGAAAK 106
Query: 110 EACLASRAIGLLALTVGAGS-----------------SSHEIMEESHAQLSRVLQTWPDA 152
EA LA RA+ LLA+T+G GS S +IM E+ +SR+L+ DA
Sbjct: 107 EARLALRAVALLAVTLGPGSKRRILPAETYNPLEPGPGSKKIMAETFPLVSRILEVSTDA 166
Query: 153 SKMISALDCLAVVTFVGAA--DLAETELSLKAMWDVIHPKSGSNV-GIIRKPRPPVLAAA 209
+I+AL+ LAVV FV A ++ +TE +KA+W +I P +G V G+ RK P VLAAA
Sbjct: 167 PLVIAALESLAVVAFVDVAAENMDDTEACMKALWGLIRPSTGPKVAGVARKTSPHVLAAA 226
Query: 210 ISAWAFLLTTIGSWRINADS------WKEPIAFLSTLLGAEDRAVRMAAGEALALCFELN 263
+SAW +LTT W+ + W++ A L++LL ++ RAVRMAAGEALA+ E+
Sbjct: 227 VSAWTLVLTTTDGWKKKKAAASSPAAWRDTAAHLASLLHSDSRAVRMAAGEALAVTIEMK 286
Query: 264 LLDVSFGEDDDVENGGTVGSKSKLFLDMQALKAKISSLASNLSMEAGGKGADKKNLTDQR 323
LL NG AL + +++ AS L+ EA G G K N +Q+
Sbjct: 287 LLTRD-------SNG--------------ALISGVAARASELANEAAGAGVGKANFVEQK 325
Query: 324 DLFQRILDFVKYGECPEESVKISGKRD-VLRVSSWSELIQLNFLRRFLGRGFLKHVQ--- 379
+LF I F+ G+ P SV+ S L S+W+++++LNFLRRFLG GFL H+Q
Sbjct: 326 ELFNSITTFLAGGKAPASSVRASSSHHGRLTASTWTDIVRLNFLRRFLGGGFLPHLQGKV 385
Query: 380 ----ENGLLQDVFDIKTDKAETLSSTDKKIFRSGEEKGRALKLNKDRRLAQERKN 430
E L+ VF +K D + KK+ EK R LN++R + + K+
Sbjct: 386 LMGEEAPLIGQVFVVKED--DMAMDHKKKV-----EKQRT--LNRERSIVSDLKH 431
>Os02g0219050 Interferon-related developmental regulator domain containing
protein
Length = 455
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 154/418 (36%), Positives = 227/418 (54%), Gaps = 65/418 (15%)
Query: 52 VLDKYIDALYEKRGSTREAALSQLVDAFESFI-LHGLVENKYATLLSLFNSSIKKGSTKE 110
VL+K +++E R STREAAL+ LV A E F+ H + + ++ +SIKKG+ KE
Sbjct: 46 VLEKAAVSVHESRASTREAALASLVGALEGFVPAHFIGWHHRGEIVRGCCASIKKGAAKE 105
Query: 111 ACLASRAIGLLALTVGAGS-----------------SSHEIMEESHAQLSRVLQTWPDAS 153
A LA RA+ LLA+T+G GS S +IM E+ +SR+L+ DAS
Sbjct: 106 ARLALRAVALLAVTLGPGSKRRILPAETYNPLEPGPGSKKIMAETFPLVSRILEVSTDAS 165
Query: 154 KMISALDCLAVVTFVGAA--DLAETELSLKAMWDVIHPKSGSNVG-IIRKPRPPVLAAAI 210
+I+AL+ LAVV FV A ++ +TE +KA+W +I P +G +G RK P VLAAA+
Sbjct: 166 LVIAALESLAVVAFVDVAAENMDDTEACMKALWGLIRPSTGPKLGGAARKTSPHVLAAAV 225
Query: 211 SAWAFLLTTIGSWR------INADSWKEPIAFLSTLLGAEDRAVRMAAGEALALCFELNL 264
SAW +LTT W+ + +W++ A L+ LL ++ RAVRMAAGEALA+ E+ L
Sbjct: 226 SAWTLVLTTTDGWKKKKAASSSPTAWRDTAAHLAPLLHSDSRAVRMAAGEALAVTIEMKL 285
Query: 265 LDVSFGEDDDVENGGTVGSKSKLFLDMQALKAKISSLASNLSMEAGGKGADKKNLTDQRD 324
+ D AL + +++ AS L+ EA G G K N +Q++
Sbjct: 286 VT----RDSH-----------------GALISGVAARASELANEAAGAGVGKANFVEQKE 324
Query: 325 LFQRILDFVKYGECP-EESVKISGKRDVLRVSSWSELIQLNFLRRFLGRGFLKHVQ---- 379
LF+ I F+ G+ P S L S+W+++++LNFLRRFLG GFL H+Q
Sbjct: 325 LFKSIASFLAGGKAPASSVRVSSSHHGRLTASTWTDIVRLNFLRRFLGGGFLPHLQGKVV 384
Query: 380 ---ENGLLQDVFDIKTDKAETLSSTDKKIFRSGEEKGRALKLNKDRRLAQERKNAVML 434
E L+ VF +K D + KK+ +K R LNK+R++A + K ++ L
Sbjct: 385 MGEEAPLIGQVFVVKED--DMAMDQKKKV-----DKQRT--LNKERQIASDLKFSMKL 433
>Os02g0219000 Interferon-related developmental regulator domain containing
protein
Length = 467
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 142/374 (37%), Positives = 210/374 (56%), Gaps = 52/374 (13%)
Query: 52 VLDKYIDALYEKRGSTREAALSQLVDAFESFILHGLVENKYA-TLLSLFNSSIKKGSTKE 110
VL+K ++++ STREAAL++L+ A E F+ E + +L SIKK + +E
Sbjct: 42 VLEKVAVSVHDSLASTREAALAELIAALEGFLSADDAEGGHTDEILRGCYVSIKKRAARE 101
Query: 111 ACLASRAIGLLALTVGAGSSS-----------------HEIMEESHAQLSRVLQT-WPDA 152
AC+A RA+ LLA+T+G G++S ++IM+ ++ SR+L+ DA
Sbjct: 102 ACVALRAVALLAVTLGPGATSKKIAAVETAANPLGSGANKIMKATYPLASRILEAPQADA 161
Query: 153 SKMISALDCLAVVTFVGAA--DLAETELSLKAMWDVIHPKSGSNVGIIRK--PRPPVLAA 208
S +++AL+CLAVV FV A ++ +TE + A+W VI P +G + K P VLAA
Sbjct: 162 SLVVAALECLAVVAFVDVAAENMDDTEACMNALWAVICPSAGPKLASAAKGTASPRVLAA 221
Query: 209 AISAWAFLLTTIGSWRIN-----ADSWKEPIAF--LSTLLGAEDRAVRMAAGEALALCFE 261
A+SAW +LTT G W A W+ A L +LLG++ R VRMAAGEALA+ E
Sbjct: 222 AVSAWTLVLTTTGGWNKKKKVSPAAPWRGAAAHAHLVSLLGSDSREVRMAAGEALAVAIE 281
Query: 262 LNLLDVSFGEDDDVENGGTVGSKSKLFLDMQALKAKISSLASNLSMEAGGKGADKKNLTD 321
+ L F E + NG AL +K+ + AS+L+ +A G G DK N +
Sbjct: 282 MKL----FTEKN---NG--------------ALFSKMEARASDLANDAAGAGVDKTNFVE 320
Query: 322 QRDLFQRILDFVKYGECPEESVKISGKR-DVLRVSSWSELIQLNFLRRFLGRGFLKHVQE 380
Q++LF+ I F+ G+ P SV+ S +L S+W++ ++LNFLRRFL GFL H+Q
Sbjct: 321 QKELFKDITTFLAGGKPPVISVRTSSSNYGLLTTSTWTDNVRLNFLRRFLAGGFLHHLQG 380
Query: 381 NGLLQDVFDIKTDK 394
GL+ VF I D+
Sbjct: 381 KGLMGQVFVIDDDE 394
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,567,634
Number of extensions: 494105
Number of successful extensions: 1348
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1323
Number of HSP's successfully gapped: 8
Length of query: 438
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 334
Effective length of database: 11,605,545
Effective search space: 3876252030
Effective search space used: 3876252030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)