BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0585600 Os07g0585600|AJ441304
         (86 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0585600  Aspartate/glutamate/uridylate kinase domain co...   175   7e-45
Os03g0431200  Amino-acid N-acetyltransferase (ArgA) family p...   164   2e-41

>Os07g0585600 Aspartate/glutamate/uridylate kinase domain containing protein
          Length = 86

 Score =  175 bits (443), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 86/86 (100%), Positives = 86/86 (100%)

Query: 1  KIDVSRIKERLDSDSIVVVSNMGYSSSGEVLNCNTYEVATACALAIEADKLICIVDGQIF 60
          KIDVSRIKERLDSDSIVVVSNMGYSSSGEVLNCNTYEVATACALAIEADKLICIVDGQIF
Sbjct: 1  KIDVSRIKERLDSDSIVVVSNMGYSSSGEVLNCNTYEVATACALAIEADKLICIVDGQIF 60

Query: 61 DEHGRVIPFMSLEEADMLIRKRAKQS 86
          DEHGRVIPFMSLEEADMLIRKRAKQS
Sbjct: 61 DEHGRVIPFMSLEEADMLIRKRAKQS 86



>Os03g0431200 Amino-acid N-acetyltransferase (ArgA) family protein
          Length = 616

 Score =  164 bits (414), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 81/86 (94%), Positives = 82/86 (95%)

Query: 1   KIDVSRIKERLDSDSIVVVSNMGYSSSGEVLNCNTYEVATACALAIEADKLICIVDGQIF 60
           KIDVSRIKERLD DSIVVVSNMGYSSSGEVLNCNTYEVATACALAIEADKLICIVDGQIF
Sbjct: 244 KIDVSRIKERLDRDSIVVVSNMGYSSSGEVLNCNTYEVATACALAIEADKLICIVDGQIF 303

Query: 61  DEHGRVIPFMSLEEADMLIRKRAKQS 86
           DEHGRV  FMS+EEADMLIR RAKQS
Sbjct: 304 DEHGRVNRFMSIEEADMLIRTRAKQS 329



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.319    0.134    0.368 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 2,556,675
Number of extensions: 81201
Number of successful extensions: 134
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 134
Number of HSP's successfully gapped: 2
Length of query: 86
Length of database: 17,035,801
Length adjustment: 56
Effective length of query: 30
Effective length of database: 14,111,817
Effective search space: 423354510
Effective search space used: 423354510
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 149 (62.0 bits)