Os03g0431200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amino-acid N-acetyltransferase (ArgA) family protein.
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Os03g0431200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Amino-acid N-acetyltransferase (ArgA) family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 229.38 | 0.712 | 10.5 | -2 | 2.58 | -2.02 | 1.99 | 6.53 | -0.674 | 9.49 | 22.25 | 476 | -- | -- |
| 252.1 | 0.739 | 10.6 | -3.29 | 2.65 | -1.4 | 1.36 | -- | -1.02 | 9.37 | 21.6 | 466 | -- | -- |
| 242.36 | 0.725 | 10.5 | -2.16 | 2.67 | -1.93 | -- | 5.41 | -0.733 | 9.51 | 22.07 | 396 | -- | -- |
| 258.02 | 0.748 | 10.6 | -3.21 | 2.66 | -1.41 | -- | -- | -1.05 | 9.26 | 22.13 | 498 | -- | -- |
| 515.32 | 1.06 | 10.5 | -1.08 | -- | -4.03 | -- | 10.1 | -0.436 | -- | 24.1 | 652 | -- | -- |
| 290.27 | 0.799 | 10.7 | -3.56 | 3.11 | -- | 1.39 | -- | -1.28 | 8.85 | -- | -- | -- | -- |
| 296.66 | 0.807 | 10.7 | -3.52 | 3.12 | -- | -- | -- | -1.28 | 8.79 | -- | -- | -- | -- |
| 553.23 | 1.1 | 10.7 | -2.82 | -- | -3.22 | -- | -- | -0.918 | -- | 24.1 | 674 | -- | -- |
| 341.31 | 0.86 | 10.4 | -- | 3.09 | -2.69 | -- | -- | -0.0794 | 8.74 | 9.138 | 47520 | -- | -- |
| 847.83 | 1.36 | 10.8 | -3.52 | -- | -- | -- | -- | -1.26 | -- | -- | -- | -- | -- |
| 622.97 | 1.17 | 10.6 | -- | 3.11 | -- | -- | -- | -0.888 | 8.87 | -- | -- | -- | -- |
| 752.01 | 1.28 | 10.6 | -- | -- | -3.77 | -- | -- | -0.5 | -- | 23.7 | 688 | -- | -- |
| 1173.77 | 1.6 | 10.7 | -- | -- | -- | -- | -- | -0.866 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 222.42 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 2 | 222.80 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 14 |
| 12 | 225.83 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 15 | 226.41 | temperature | 20 | 270 | > th | dose dependent | sin | 18 | NA |
| 17 | 226.42 | temperature | 20 | 90 | > th | dose dependent | rect. | 15 | 14 |
| 22 | 227.77 | temperature | 10 | 270 | > th | dose dependent | sin | 18 | NA |
| 27 | 228.28 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 21 |
| 43 | 229.68 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 50 | 230.12 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 53 | 230.13 | wind | 3 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 54 | 230.17 | radiation | 20 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 69 | 230.84 | temperature | 20 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 115 | 231.39 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 120 | 231.56 | wind | 1 | 43200 | < th | dose dependent | rect. | 21 | 5 |
| 122 | 231.57 | wind | 1 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 131 | 231.83 | radiation | 30 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 133 | 231.85 | radiation | 30 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 142 | 232.00 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 143 | 232.03 | radiation | 10 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 172 | 232.23 | radiation | 20 | 43200 | > th | dose independent | sin | 10 | NA |
| 191 | 232.25 | radiation | 10 | 43200 | > th | dose dependent | rect. | 8 | 3 |
| 248 | 232.49 | radiation | 20 | 43200 | < th | dose independent | rect. | 18 | 18 |
| 328 | 232.70 | radiation | 40 | 43200 | > th | dose independent | sin | 8 | NA |
| 384 | 232.88 | radiation | 40 | 43200 | < th | dose dependent | rect. | 3 | 9 |
| 457 | 232.97 | radiation | 1 | 1440 | < th | dose dependent | rect. | 20 | 9 |
| 458 | 232.98 | radiation | 20 | 43200 | < th | dose independent | sin | 7 | NA |
| 486 | 233.04 | radiation | 10 | 43200 | > th | dose dependent | sin | 9 | NA |
| 574 | 233.18 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 23 |
| 742 | 233.42 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |
| 886 | 233.44 | humidity | 80 | 14400 | > th | dose independent | rect. | 21 | 7 |
| 935 | 233.51 | radiation | 40 | 43200 | < th | dose dependent | sin | 8 | NA |