BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0585000 Os07g0585000|AK071269
(445 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0585000 C2 calcium/lipid-binding region, CaLB domain c... 647 0.0
Os03g0194100 C2 calcium/lipid-binding region, CaLB domain c... 231 9e-61
Os01g0953500 C2 calcium/lipid-binding region, CaLB domain c... 129 6e-30
Os01g0349501 65 8e-11
>Os07g0585000 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 445
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/445 (74%), Positives = 331/445 (74%)
Query: 1 MESQQEKXXXXXXXXXXXXXXXXELIGYVDVHVQSARDIQNICIYHKQDVYARLSLPGEG 60
MESQQEK ELIGYVDVHVQSARDIQNICIYHKQDVYARLSLPGEG
Sbjct: 1 MESQQEKAVSAPAANGSGGAGGGELIGYVDVHVQSARDIQNICIYHKQDVYARLSLPGEG 60
Query: 61 APAASTQVINGGGRNPVFDQSLRLGVRAGDVDGALRCEVWMLSRVKNYLQDQLLGFALVP 120
APAASTQVINGGGRNPVFDQSLRLGVRAGDVDGALRCEVWMLSRVKNYLQDQLLGFALVP
Sbjct: 61 APAASTQVINGGGRNPVFDQSLRLGVRAGDVDGALRCEVWMLSRVKNYLQDQLLGFALVP 120
Query: 121 LPDVVAAEGGTLAREFPLSTNDIFHSHAGFLQLELSYIGVVPEVVPISPTPKPALADAEE 180
LPDVVAAEGGTLAREFPLSTNDIFHSHAGFLQLELSYIGVVPEVVPISPTPKPALADAEE
Sbjct: 121 LPDVVAAEGGTLAREFPLSTNDIFHSHAGFLQLELSYIGVVPEVVPISPTPKPALADAEE 180
Query: 181 HRAGGAANGKEYEKIEFPDLNLVEENQIMLSEYIGLPCSAVEPQSSESLLTSEEDGDGAT 240
HRAGGAANGKEYEKIEFPDLNLVEENQIMLSEYIGLPCSAVEPQSSESLLTSEEDGDGAT
Sbjct: 181 HRAGGAANGKEYEKIEFPDLNLVEENQIMLSEYIGLPCSAVEPQSSESLLTSEEDGDGAT 240
Query: 241 AETHVAGVRVVQSFSTDNSTADSAGTFRSDXXXXXXXXXXXXXXXXXXXXXQSNSSGNXX 300
AETHVAGVRVVQSFSTDNSTADSAGTFRSD QSNSSGN
Sbjct: 241 AETHVAGVRVVQSFSTDNSTADSAGTFRSDTPVSSVSTTESPAAAAVPATPQSNSSGNAV 300
Query: 301 XXXXXXXXXXXXXXXXXXXXXRTVQXXXXXXXXXXXXXXESAVDKPPVIRVNLEQEVKVD 360
RTVQ ESAVDKPPVIRVNLEQEVKVD
Sbjct: 301 SSAEQKEKAASDAADAEVESSRTVQSSASPAANSPGAMSESAVDKPPVIRVNLEQEVKVD 360
Query: 361 QKEIMDMYMKSMQQFTESLAKMKLPLDLDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
QKEIMDMYMKSMQQFTESLAKMKLPLDLDN
Sbjct: 361 QKEIMDMYMKSMQQFTESLAKMKLPLDLDNGSDKSAAVSGAGAAASDADSSGADSGAAAA 420
Query: 421 XXXXXXXXXXPEKSPKVFYGSRAFF 445
PEKSPKVFYGSRAFF
Sbjct: 421 AAAKKPMAGGPEKSPKVFYGSRAFF 445
>Os03g0194100 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 402
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 113/195 (57%), Positives = 140/195 (71%), Gaps = 13/195 (6%)
Query: 26 IGYVDVHVQSARDIQNICIYHKQDVYARLSLPGEGAPAASTQVINGGGRNPVFDQSLRLG 85
IGY+DV V ARDI NICIYHKQDVYA+L L + + ST+VINGGGRNPVFD LRL
Sbjct: 38 IGYLDVFVHQARDIHNICIYHKQDVYAKLCLTSDPDVSCSTKVINGGGRNPVFDDGLRLD 97
Query: 86 VRAGDVDGALRCEVWMLSRVKNYLQDQLLGFALVPLPDVVAAEGGTLAREFPLSTNDIFH 145
VR VD +L+CE+WMLSRV+NYL+DQLLGFALVPL D+V A+ G L +EF +++ D+ H
Sbjct: 98 VRT--VDASLKCEIWMLSRVRNYLEDQLLGFALVPLADIVMAD-GKLVQEFSMTSTDLLH 154
Query: 146 SHAGFLQLELSYIGVVPEVVPISPTPKPALADAEEHRAGGAANGK----EYEKIEFPDLN 201
+ AGF+QL LSY+G P+V+PI K AL G+ N E EKIEFPDLN
Sbjct: 155 TPAGFVQLSLSYVGCSPDVIPIPAPNKSALV------VNGSGNDSSVPCELEKIEFPDLN 208
Query: 202 LVEENQIMLSEYIGL 216
+V ENQIM+S+Y +
Sbjct: 209 VVNENQIMVSKYFEM 223
>Os01g0953500 C2 calcium/lipid-binding region, CaLB domain containing protein
Length = 397
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/196 (45%), Positives = 114/196 (58%), Gaps = 13/196 (6%)
Query: 28 YVDVHVQSARDIQNICIYHKQDVYARLSLPG--EGAPAASTQVINGGGRNPVFDQSLR-L 84
++D++V AR I NICIY QDVYARL+L + APA T+V GGG NP FD+ L L
Sbjct: 27 FLDIYVHGARGIHNICIYAAQDVYARLALTSSPDDAPALDTRVAAGGGANPRFDERLPPL 86
Query: 85 GVRAGDV-DGALRCEVWMLSRVKNYLQDQLLGFALVPLPDVVAAEGGTLAREFPLSTNDI 143
VR + L+CE+WM S + L DQLLGFALVPL V AA+G LA++F LS+ D+
Sbjct: 87 RVRRARLGTDVLKCEIWMRSCARRLLDDQLLGFALVPLAAVAAADGARLAQDFSLSSTDL 146
Query: 144 FHSHAGFLQLELSYIGVVPEVVPISPTPKPALADAEEHRAGGA-----ANGKEYEKIEFP 198
FHS AG ++L L+ P P P A AE A +Y +IEFP
Sbjct: 147 FHSPAGTIRLSLALHSGPPG----DACPPPERAAAEPSITSEVVILEPAPPVDYARIEFP 202
Query: 199 DLNLVEENQIMLSEYI 214
DLN V+EN M +Y+
Sbjct: 203 DLNAVKENDDMAVQYL 218
>Os01g0349501
Length = 190
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 167 ISPTPKPALADAEEHRAGGAANGKEYEKIEFPDLNLVEENQIMLSEYIGLP-CSAVEPQS 225
++P P+ AD AGGAANGKEYE IEFPDLNLVEENQ+MLS P C + P+S
Sbjct: 49 LAPVPETTAADGAVTPAGGAANGKEYEIIEFPDLNLVEENQLMLSMAHPTPACFSESPRS 108
Query: 226 S 226
+
Sbjct: 109 N 109
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.132 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,346,731
Number of extensions: 446964
Number of successful extensions: 1077
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 1070
Number of HSP's successfully gapped: 4
Length of query: 445
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 341
Effective length of database: 11,605,545
Effective search space: 3957490845
Effective search space used: 3957490845
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 158 (65.5 bits)