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Os03g0194100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : C2 calcium/lipid-binding region, CaLB domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0176) R2 : 0.731
β1 : 0.9 (0.0644) R2dD : 0.12 R2D : 0.101
β2 : 1.37 (0.0429) R2dC : 0.608 R2C : 0.6
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.241 (0.0375) R2dN8 : 0.0326 R2N8 : 6.04e-05
σ : 0.331
deviance : 49.86
__
_____
C
peak time of C : 21.7
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
35.45 0.28 11.2 0.295 1.3 0.789 -0.0296 -1.72 0.147 21.5 26.6 2570 -- --
35.93 0.279 11.2 0.695 1.3 0.636 -0.091 -- 0.213 21.5 26.1 2560 -- --
35.45 0.277 11.2 0.304 1.3 0.782 -- -1.67 0.144 21.5 26.5 2574 -- --
35.91 0.279 11.2 0.697 1.3 0.617 -- -- 0.209 21.5 26.06 2578 -- --
99.88 0.465 11.2 -0.21 -- 1.71 -- -4.2 -0.0564 -- 24.55 794 -- --
49.85 0.331 11.2 0.9 1.37 -- 0.0128 -- 0.241 21.7 -- -- -- --
49.86 0.331 11.2 0.9 1.37 -- -- -- 0.241 21.7 -- -- -- --
104.53 0.476 11.1 0.573 -- 1.43 -- -- 0.103 -- 24.4 808 -- --
40.89 0.298 11.2 -- 1.36 0.831 -- -- -0.155 21.7 18.27 47520 -- --
161.8 0.594 11.1 0.912 -- -- -- -- 0.239 -- -- -- -- --
71.18 0.395 11.2 -- 1.38 -- -- -- 0.141 21.7 -- -- -- --
112.69 0.494 11.2 -- -- 1.54 -- -- 0.00636 -- 24.1 807 -- --
183.73 0.633 11.1 -- -- -- -- -- 0.138 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.45 humidity 50.0 270 > th dose dependent rect. 17 7
2 32.57 radiation 20.0 270 < th dose dependent rect. 15 9
12 33.10 radiation 1.0 270 < th dose independent rect. 16 8
16 33.22 temperature 15.0 270 > th dose independent rect. 24 17
18 33.24 radiation 10.0 270 < th dose dependent rect. 8 16
19 33.28 precipitation 0.1 270 < th dose independent rect. 24 17
20 33.28 precipitation 0.1 270 < th dose dependent rect. 24 17
26 33.41 wind 9.0 270 < th dose independent rect. 24 17
34 33.47 humidity 50.0 270 > th dose independent rect. 17 7
38 33.52 humidity 50.0 270 > th dose dependent rect. 5 19
43 33.59 temperature 10.0 270 > th dose independent rect. 17 7
48 33.59 atmosphere 995.0 270 > th dose independent rect. 24 17
49 33.59 atmosphere 1015.0 270 < th dose independent rect. 24 17
50 33.60 wind 9.0 270 < th dose independent rect. 17 7
54 33.66 radiation 1.0 270 < th dose independent rect. 5 19
63 33.77 radiation 1.0 270 < th dose independent rect. 8 16
67 33.80 humidity 50.0 10 > th dose dependent rect. 19 7
71 33.82 precipitation 0.1 270 < th dose independent rect. 13 15
72 33.82 precipitation 0.1 270 < th dose dependent rect. 13 15
74 33.85 wind 1.0 270 > th dose independent rect. 4 9
90 34.06 humidity 70.0 270 > th dose independent rect. 5 19
109 34.24 atmosphere 995.0 270 > th dose independent rect. 17 7
112 34.30 temperature 30.0 270 < th dose independent rect. 17 7
131 34.42 temperature 10.0 270 > th dose dependent rect. 12 16
137 34.46 wind 9.0 270 < th dose dependent rect. 23 7
142 34.51 precipitation 0.1 270 < th dose independent rect. 17 7
143 34.51 temperature 10.0 270 > th dose independent rect. 4 9
144 34.51 atmosphere 995.0 270 > th dose independent rect. 4 9
145 34.51 atmosphere 1015.0 270 < th dose independent rect. 4 9
146 34.51 temperature 10.0 270 > th dose independent rect. 13 15
147 34.51 precipitation 0.1 270 < th dose dependent rect. 17 7
154 34.56 precipitation 0.1 270 < th dose independent rect. 23 7
156 34.56 precipitation 0.1 270 < th dose independent rect. 4 9
157 34.56 precipitation 0.1 270 < th dose dependent rect. 23 7
158 34.56 precipitation 0.1 270 < th dose dependent rect. 4 9
162 34.58 humidity 60.0 270 > th dose independent rect. 18 17
165 34.60 wind 9.0 270 < th dose independent rect. 13 15
170 34.62 temperature 10.0 270 > th dose dependent rect. 23 7
173 34.64 temperature 15.0 270 > th dose independent rect. 23 7
185 34.70 radiation 1.0 270 > th dose independent sin 19 NA
191 34.78 humidity 50.0 270 > th dose independent rect. 4 9
196 34.81 wind 7.0 270 < th dose independent rect. 23 7
204 34.85 wind 9.0 270 < th dose dependent rect. 24 5
205 34.86 radiation 10.0 270 < th dose independent rect. 23 7
211 34.87 temperature 30.0 270 < th dose independent rect. 23 7
212 34.87 humidity 50.0 270 > th dose independent rect. 23 7
215 34.87 atmosphere 995.0 270 > th dose independent rect. 23 7
219 34.87 temperature 10.0 270 > th dose independent rect. 6 17
221 34.88 wind 1.0 270 > th dose independent rect. 12 16
226 34.89 radiation 40.0 270 < th dose independent rect. 18 17
227 34.90 radiation 40.0 270 < th dose dependent rect. 23 7
230 34.91 humidity 90.0 270 < th dose independent rect. 11 7
242 34.96 temperature 30.0 270 < th dose independent rect. 18 17
246 34.97 wind 9.0 270 < th dose independent rect. 4 9
258 35.01 temperature 15.0 270 > th dose independent rect. 12 17
278 35.09 radiation 1.0 270 < th dose dependent sin 19 NA
281 35.11 radiation 1.0 270 < th dose independent sin 19 NA
304 35.16 wind 9.0 270 < th dose dependent rect. 17 6
312 35.17 radiation 1.0 270 > th dose independent rect. 11 8
324 35.17 humidity 50.0 270 > th dose dependent rect. 19 3
359 35.25 atmosphere 1015.0 270 < th dose independent rect. 23 7
388 35.29 wind 9.0 270 < th dose independent rect. 6 17
393 35.30 wind 3.0 270 < th dose independent rect. 24 5
421 35.34 wind 1.0 270 > th dose independent rect. 11 7
427 35.35 precipitation 0.1 10 < th dose independent rect. 15 15
430 35.35 precipitation 0.1 10 < th dose dependent rect. 15 15
462 35.41 atmosphere 1015.0 270 < th dose independent rect. 17 7
468 35.44 atmosphere 995.0 270 > th dose independent rect. 18 5
469 35.44 temperature 15.0 10 > th dose independent rect. 15 15
516 35.52 atmosphere 995.0 270 > th dose independent rect. 13 15
518 35.52 temperature 10.0 10 > th dose dependent rect. 15 15
560 35.68 temperature 15.0 270 > th dose independent rect. 11 7
563 35.69 wind 9.0 270 < th dose independent rect. 11 7
564 35.69 temperature 30.0 270 < th dose independent rect. 5 7
579 35.73 humidity 70.0 10 > th dose independent rect. 19 7
601 35.82 precipitation 0.1 10 < th dose independent rect. 6 9
605 35.82 precipitation 0.1 10 < th dose dependent rect. 6 9
608 35.83 radiation 40.0 10 < th dose independent rect. 15 15
611 35.84 wind 9.0 10 < th dose independent rect. 15 15
613 35.85 temperature 10.0 10 > th dose independent rect. 6 9
615 35.85 atmosphere 995.0 10 > th dose independent rect. 6 9
616 35.85 atmosphere 1015.0 10 < th dose independent rect. 6 9
619 35.85 atmosphere 1015.0 270 < th dose independent rect. 6 17
622 35.86 atmosphere 1015.0 270 < th dose independent rect. 11 7
623 35.86 temperature 10.0 270 > th dose independent rect. 18 17
650 35.92 wind 9.0 270 < th dose independent rect. 18 17
658 35.94 precipitation 0.1 270 < th dose independent rect. 11 7
664 35.94 precipitation 0.1 270 < th dose dependent rect. 11 7
668 35.95 humidity 50.0 270 > th dose dependent rect. 24 5
675 35.96 radiation 10.0 1440 < th dose dependent rect. 18 12
676 35.97 radiation 40.0 4320 > th dose independent rect. 8 1
699 35.98 temperature 15.0 270 > th dose independent rect. 22 21
701 35.99 wind 1.0 270 > th dose independent rect. 17 7
702 35.99 atmosphere 995.0 270 > th dose independent rect. 18 17
703 35.99 radiation 1.0 1440 > th dose dependent rect. 5 1
709 36.00 radiation 1.0 10 > th dose independent rect. 6 9
711 36.00 radiation 1.0 270 < th dose dependent rect. 23 16
717 36.02 precipitation 0.1 270 < th dose independent rect. 6 17
722 36.02 radiation 10.0 1440 < th dose dependent rect. 20 10
724 36.02 precipitation 0.1 270 < th dose dependent rect. 6 17
725 36.03 wind 3.0 270 < th dose independent rect. 1 3
736 36.05 radiation 1.0 1440 > th dose dependent rect. 18 12
739 36.06 radiation 10.0 1440 < th dose dependent rect. 5 1
751 36.09 precipitation 0.1 30 < th dose independent rect. 2 17
765 36.09 precipitation 0.1 30 < th dose dependent rect. 2 17
766 36.10 atmosphere 995.0 270 > th dose independent rect. 11 7
770 36.10 radiation 10.0 1440 < th dose dependent rect. 22 8
773 36.10 temperature 10.0 270 > th dose dependent rect. 24 17
810 36.14 atmosphere 1015.0 270 < th dose dependent rect. 24 5
812 36.14 radiation 40.0 1440 < th dose dependent rect. 18 9
823 36.17 atmosphere 1015.0 270 < th dose independent rect. 18 5
846 36.18 humidity 50.0 270 > th dose independent rect. 5 18
848 36.18 wind 7.0 10 < th dose dependent rect. 2 4
854 36.19 radiation 1.0 270 < th dose independent rect. 23 16
865 36.21 temperature 10.0 1440 > th dose independent rect. 20 7
868 36.21 temperature 30.0 1440 < th dose independent rect. 20 7
872 36.21 humidity 50.0 1440 > th dose independent rect. 20 7
878 36.21 atmosphere 995.0 1440 > th dose independent rect. 20 7
879 36.21 radiation 1.0 1440 < th dose independent rect. 20 7
901 36.21 temperature 10.0 1440 > th dose independent rect. 3 17
909 36.22 radiation 30.0 1440 < th dose dependent rect. 20 7
958 36.25 wind 1.0 10 > th dose independent rect. 6 9
990 36.27 temperature 30.0 1440 > th dose independent rect. 18 20